BAC Information

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BAC

Clone NameB6Ng01-123K02
Chromosome6 (Build37)
Map Location 19,507,349 - 19,508,505
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123K02.bB6Ng01-123K02.g
ACCDH926744DH926745
length1,1541,172
definitionDH926744|Mus musculus domesticus DNA, BAC clone: B6Ng01-123K02, 5' end.DH926745|Mus musculus domesticus DNA, BAC clone: B6Ng01-123K02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgactttcaaagttcttattttactgaacctgactttttgt
acttttcttctcattaattattgtgacactattataatcacttcttcttg
ctcagcttcattgtatcctgaaactaatcatgaactcattccatagcttg
tggttgccatgaataaatggctctcagaagttggatttttagtggttgag
aatttttcaaggaggcctgaaatgaattatggccatatagaggttgtgtt
tgctaaatgtgcctctttttgattgactttggagtgaatgaaagaaaggt
ttgaaaactttctgctttcaagtgcaagtggtgatggtgatttttcaggc
tatactatgtatcctctgtcatgggaatcatcttaagaaataaaacccag
gggagctcagtagttcagaatcaggtctgcatttccagaggatgactgct
cagttcctagtttctgtattgggtagtttacaactgcctaggggtcagct
tccgggacccactgccttggcttctgtagttacacacccatatcagatac
accagcatgcgcacgattaagtataaaataattaaaatagataaacaaag
cacagacatgctgaatttaagccagattgtttgattctgttatttagaga
tagattcccccaaataaatatttttatcaaaatttcaaaagtggctggtg
taattttttaaatttaattttatttttaatttatttgtttacactccata
ttacattccctgtcccatcatccatcctcccactgctccacattccacac
ctcctccccacccctacccatctccacgtggatgctcccacacacacacc
tgaccctctaaaactccctggggcatccagtcttttgatgggttctgtgc
atcatctctgagttaacatagatctggaaatcctctactgtatgtggttt
gggggcctcatatcagatgttgtatgctgtctgtttgtggtccagtgttt
gagagatctcaaggttcagattaattaaggactaatggtcaccttacagt
attaccctctctcagcatctttcagccttgaatatcttagaatctgagaa
ttgcaccttggtgtcactctgttaattatttttggatgcttggcatagca
attc

gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaaaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaacactcctccattgttggtgt
gattgcaggcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactactggaggatccagcaatacctctcctgggca
tatatccagaagatgtcccaaacggtaagaaggacacatgctccactttg
ttcatagcagccttatttataacagccagaagctggaaagaacccagatg
tccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggaggacatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggatacccaagatataagatacaacttgataaacacatgaaacccaaga
agaatgaagactgaagtgtggacactatgcccctccttagaattgggatc
aaaacacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccaactagagactgccatatccagggatccaccccataatca
gcttccaaaccattgcatacactagcaagattttgttgaaaggacgcaga
tgtagctgtctcttgtgacactatgccggggcctagcaacacagaagtgg
atgctcacagtcagctaatggatggatcacagggctcccaatggaggagc
tagagaaagtacccaaggagctaaagggatctgcaccctttagtgcaaca
acattatgaactaacattaccccgagctccttgactcttagcttgcattt
gtatcaaaagatggccttagtcggcatcacttggaaagagaagccattga
catgccaactgttattgttctcagatacagggaatgtcaggcccaaaaaa
tggaatggtggtgtggaaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19507349_19508505
seq2: B6Ng01-123K02.b_44_1197 (reverse)

seq1  GAATTGCTATTGCAAGCAT-CAAAAATAATATACAGAGTGACACCAAGGT  49
      ||||||||||  ||||||| ||||||||||  ||||||||||||||||||
seq2  GAATTGCTATGCCAAGCATCCAAAAATAATTAACAGAGTGACACCAAGGT  50

seq1  GCAATTTCTCAGATTCTTAAGATTATTACAAGGCTGAAAGATGCTGAGGA  99
      |||| ||||||||||| ||||| |||| ||||||||||||||||||| ||
seq2  GCAA-TTCTCAGATTC-TAAGA-TATT-CAAGGCTGAAAGATGCTGA-GA  95

seq1  GAAGGGTAATACTGTAGGTGGACCATTAGT-CTTAATTAATCTGGAACCC  148
      | |||||||||||||| |  |||||||||| |||||||||||| ||||| 
seq2  G-AGGGTAATACTGTAAGGTGACCATTAGTCCTTAATTAATCT-GAACCT  143

seq1  TGAGATCTCTCAAACACTGGACCACCAAACAGACAGCATACAACATCTGA  198
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGAGATCTCTCAAACACTGGACCA-CAAACAGACAGCATACAACATCTGA  192

seq1  TATGAGGCCCCCAAACCACATACAGTAGAGGATTTCCAGATCTATGTTAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGCCCCCAAACCACATACAGTAGAGGATTTCCAGATCTATGTTAA  242

seq1  CTCAGAGATGATGCACAGAA-CCATCAAGAGACTGGATGCCCCAGGGAG-  296
      |||||||||||||||||||| ||||||| |||||||||||||||||||| 
seq2  CTCAGAGATGATGCACAGAACCCATCAAAAGACTGGATGCCCCAGGGAGT  292

seq1  TTTAGA-GGTCAGGTGTGTGTGTGGGAGCATCCACGTGGAGATGGGTAGG  345
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGGGTCAGGTGTGTGTGTGGGAGCATCCACGTGGAGATGGGTAGG  342

seq1  GGTGGGGAGGAGGTGTGGAATGTGGAGCAGTGGGAGGATGGATGATGGGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGAGGAGGTGTGGAATGTGGAGCAGTGGGAGGATGGATGATGGGA  392

seq1  CAGGGAATGTAATATGGAGTGTAAACAAATAAATTAAAAATAAAATTAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAATGTAATATGGAGTGTAAACAAATAAATTAAAAATAAAATTAAA  442

seq1  TTTAAAAAATTACACCAGCCACTTTTGAAATTTTGATAAAAATATTTATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAATTACACCAGCCACTTTTGAAATTTTGATAAAAATATTTATT  492

seq1  TGGGGGAATCTATCTCTAAATAACAGAATCAAACAATCTGGCTTAAATTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAATCTATCTCTAAATAACAGAATCAAACAATCTGGCTTAAATTC  542

seq1  AGCATGTCTGTGCTTTGTTTATCTATTTTAATTATTTTATACTTAATCGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTCTGTGCTTTGTTTATCTATTTTAATTATTTTATACTTAATCGT  592

seq1  GCGCATGCTGGTGTATCTGATATGGGTGTGTAACTACAGAAGCCAAGGCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCATGCTGGTGTATCTGATATGGGTGTGTAACTACAGAAGCCAAGGCA  642

seq1  GTGGGTCCCGGAAGCTGACCCCTAGGCAGTTGTAAACTACCCAATACAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCCCGGAAGCTGACCCCTAGGCAGTTGTAAACTACCCAATACAGA  692

seq1  AACTAGGAACTGAGCAGTCATCCTCTGGAAATGCAGACCTGATTCTGAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGAACTGAGCAGTCATCCTCTGGAAATGCAGACCTGATTCTGAAC  742

seq1  TACTGAGCTCCCCTGGGTTTTATTTCTTAAGATGATTCCCATGACAGAGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGCTCCCCTGGGTTTTATTTCTTAAGATGATTCCCATGACAGAGG  792

seq1  ATACATAGTATAGCCTGAAAAATCACCATCACCACTTGCACTTGAAAGCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGTATAGCCTGAAAAATCACCATCACCACTTGCACTTGAAAGCA  842

seq1  GAAAGTTTTCAAACCTTTCTTTCATTCACTCCAAAGTCAATCAAAAAGAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTTTCAAACCTTTCTTTCATTCACTCCAAAGTCAATCAAAAAGAG  892

seq1  GCACATTTAGCAAACACAACCTCTATATGGCCATAATTCATTTCAGGCCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTAGCAAACACAACCTCTATATGGCCATAATTCATTTCAGGCCT  942

seq1  CCTTGAAAAATTCTCAACCACTAAAAATCCAACTTCTGAGAGCCATTTAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAAAATTCTCAACCACTAAAAATCCAACTTCTGAGAGCCATTTAT  992

seq1  TCATGGCAACCACAAGCTATGGAATGAGTTCATGATTAGTTTCAGGATAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCAACCACAAGCTATGGAATGAGTTCATGATTAGTTTCAGGATAC  1042

seq1  AATGAAGCTGAGCAAGAAGAAGTGATTATAATAGTGTCACAATAATTAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCTGAGCAAGAAGAAGTGATTATAATAGTGTCACAATAATTAAT  1092

seq1  GAGAAGAAAAGTACAAAAAGTCAGGTTCAGTAAAATAAGAACTTTGAAAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAAAGTACAAAAAGTCAGGTTCAGTAAAATAAGAACTTTGAAAG  1142

seq1  TCAAAAGAATTC  1157
      ||||||||||||
seq2  TCAAAAGAATTC  1154


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