BAC Information

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BAC

Clone NameB6Ng01-126E05
Chromosome6 (Build37)3 (Build37)
Map Location 138,270,302 - 138,270,34424,292,883 - 24,293,834
singlet/doubletsingletsinglet
Overlap genenone
Upstream genePtpro, Eps8, Strap, Dera, 9830102E05Rik, Mgst1
Downstream geneLmo3, Igbp1b, EG668196
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126E05.bB6Ng01-126E05.g
ACCDH928679DH928680
length310948
definitionDH928679|Mus musculus domesticus DNA, BAC clone: B6Ng01-126E05, 5' end.DH928680|Mus musculus domesticus DNA, BAC clone: B6Ng01-126E05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(138,270,302 - 138,270,344)(24,292,883 - 24,293,834)
sequence
acaaggcaagctaaccagcctgagacaaggccacagaaggaacaactgtg
gcacaaacctcaagatcagttctttggcgagtttttctctgtcctcacca
ctagtggagctcagcaatgctatggaaggctatgcagtacatgcacatct
ttagtaaagaatagtgaggcatagcaaatcaagccaatgctcagtgctcc
tactgtctgtggggtcagatttatactccttcaacaaatgtcctttcaca
tgtctgctgtatcaaaacatccatgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgc
gaattcaacagaagcacaggtatcacaagatgaacacgcccatgcccatc
agtttccaccacgagttttgcatgttttcacagttcctccatcctttcct
attctgctcaatttgaagcatttgaaatcaatctgaaagtttctttgttc
agttgtgaagaaataagactgagaccaaagcatggcaaatgtctcagaaa
agtcatttacatattcttgaaaataggtaaatttacaactctgaggttca
gagtatgctggttttggaaggcagaccttggtgtcccattatggactgca
cagtgtttcaaaagtcattcattcaaacttgggaacttcattcattgctc
agcagtcaccattctactgcaggtatctgagaacataaaaaaactgtcta
tcggagatcatgtattgaaaagaaaatagaaataatacacaggtacgttt
aaataattattttaaaaagtatctctgaagctgggatgcagattgccttt
tcctttgggtttcattaaggccatccatagactgccgcatatacagacac
caaacccaaacactattgtgaaagctaggaagtgcttgtttgcaggagcc
tgttagagctgtctcctgaagtacagatccagatgttcacagccaaacat
tggactgatcaccatgtccctaatagaggagttagagaaaggactgaagg
aactgaaggagtttgtagtcccataggaagaacaacaatatcaaccaacc
agaacccccagagctcccaggtactaaaccacaaaccaaacactacacat
ggagggatccatggttccaggcacatatgtagcagaggatggccttgttg
gacatcaatgggagtgaggcccttggtcccgggaaagtcgatgtcccagc
gtagggaatgccagggcaagagacagggtgggaggatggggtgggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_138270302_138270344
seq2: B6Ng01-126E05.b_319_361 (reverse)

seq1  GCACACACACACACACACACACACACACACACACACATGGATG  43
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACACACACACACACACACACACACACACACATGGATG  43

seq1: chr3_24292883_24293834
seq2: B6Ng01-126E05.g_66_1013

seq1  GAATTCAACAGAAGCACAGGTATCACAAGATGAACACGCCCATGCCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGAAGCACAGGTATCACAAGATGAACACGCCCATGCCCATC  50

seq1  AGTTTCCACCACGAGTTTTGCATGTTTTCACAGTTCCTCCATCCTTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCACCACGAGTTTTGCATGTTTTCACAGTTCCTCCATCCTTTCCT  100

seq1  ATTCTGCTCAATTTGAAGCATTTGAAATCAATCTGAAAGTTTCTTTGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCTCAATTTGAAGCATTTGAAATCAATCTGAAAGTTTCTTTGTTC  150

seq1  AGTTGTGAAGAAATAAGACTGAGACCAAAGCATGGCAAATGTCTCAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGAAGAAATAAGACTGAGACCAAAGCATGGCAAATGTCTCAGAAA  200

seq1  AGTCATTTACATATTCTTGAAAATAGGTAAATTTACAACTCTGAGGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTTACATATTCTTGAAAATAGGTAAATTTACAACTCTGAGGTTCA  250

seq1  GAGTATGCTGGTTTTGGAAGGCAGACCTTGGTGTCCCATTATGGACTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGCTGGTTTTGGAAGGCAGACCTTGGTGTCCCATTATGGACTGCA  300

seq1  CAGTGTTTCAAAAGTCATTCATTCAAACTTGGGAACTTCATTCATTGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTTCAAAAGTCATTCATTCAAACTTGGGAACTTCATTCATTGCTC  350

seq1  AGCAGTCACCATTCTACTGCAGGTATCTGAGAACATAAAAAAACTGTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCACCATTCTACTGCAGGTATCTGAGAACATAAAAAAACTGTCTA  400

seq1  TCGGAGATCATGTATTGAAAAGAAAATAGAAATAATACACAGGTACGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGATCATGTATTGAAAAGAAAATAGAAATAATACACAGGTACGTTT  450

seq1  AAATAATTATTTTAAAAAGTATCTCTGAAGCTGGGATGCAGATTGCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTATTTTAAAAAGTATCTCTGAAGCTGGGATGCAGATTGCCTTT  500

seq1  TCCTTTGGGTTTCATTAAGGCCATCCATAGACTGCCGCATATACAGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGGTTTCATTAAGGCCATCCATAGACTGCCGCATATACAGACAC  550

seq1  CAAACCCAAACACTATTGTGAAAGCTAGGAAGTGCTTGTTTGCAGGAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCAAACACTATTGTGAAAGCTAGGAAGTGCTTGTTTGCAGGAGCC  600

seq1  TGTTAGAGCTGTCTCCTGAAGTACAGATCCAGATGTTCACAGCCAAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAGCTGTCTCCTGAAGTACAGATCCAGATGTTCACAGCCAAACAT  650

seq1  TGGACTGATCACCATGTCCCTAATAGAGGAGTTAGAGAAAGGACTGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGATCACCATGTCCCTAATAGAGGAGTTAGAGAAAGGACTGAAGG  700

seq1  AACTGAAGGAGTTTGTAGTCCCATAGGAAGAACAACAATATCAACCAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGGAGTTTGTAGTCCCATAGGAAGAACAACAATATCAACCAACC  750

seq1  AGAACCCCCAGAGCTCCCAGGTACTAAACCACAAACCAAACACTACACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCCCAGAGCTCCCAGGTACTAAACCACAAACCAAACACTACACAT  800

seq1  GGAGGGATCCATGGTTCCAGGCACATATGTAGCAGAGGATGGCCTTGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGATCCATGGTTCCAGGCACATATGTAGCAGAGGATGGCCTTGTTG  850

seq1  GACATCAATGGGAGGTGAGGCCCTTGGTCCCGGGAAAGTTCGATGTCCCA  900
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  GACATCAATGGGA-GTGAGGCCCTTGGTCCCGGGAAAG-TCGATGTCCCA  898

seq1  GCGTAGGGGAATGCCAGGGCAAGGAGACAGGAGTGGGAGGAT-GGGTGGG  949
      ||||| |||||||||||||||| |||||||| |||||||||| |||||||
seq2  GCGTA-GGGAATGCCAGGGCAA-GAGACAGG-GTGGGAGGATGGGGTGGG  945

seq1  TGA  952
      |||
seq2  TGA  948