BAC Information

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BAC

Clone NameB6Ng01-126F15
Chromosome6 (Build37)
Map Location 15,242,947 - 15,243,982
singlet/doubletsinglet
Overlap geneFoxp2
Upstream geneLOC667797, Ppp1r3a, LOC100040568
Downstream geneMdfic, LOC100041116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126F15.bB6Ng01-126F15.g
ACCDH928743DH928744
length2931,015
definitionDH928743|Mus musculus domesticus DNA, BAC clone: B6Ng01-126F15, 5' end.DH928744|Mus musculus domesticus DNA, BAC clone: B6Ng01-126F15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgcttactggcttgcttcctgtggcttgctcagttacctttcttttacat
agcctccattcatctgagtgggatggtcccacctacaaagaactggtggg
attgtaggcccctgtctgctctgccactgggcacgggccaattggggagg
cagaatgaggacctaggcactactcagggagtgggaaattgcagcctgag
atgtgggatgtggggttctcagactcttcaatattcaagtgccgctggga
gtctcagaagggcagagaaagcaggggttggggttgggggttg

gaattcaatagcaagataaagaagggcatttttgatggagcaaattttaa
tagacatcatcaaaaatgtagaaacagaaaatgatgaaacctgctttttt
gaagaaatagatagtaatttctgaagagcattgagatgctttaagaaaag
aacaagactagcttaaaaggcttgctttacttacttattgtgactctgtc
agatgcctaacaaaaaacacaaaagtggggctggagagaagactcagaga
ttgagaatgaaaccatgtttggttcttggcttcccctcaggtatctcata
gccaccatcaactccagatccagcagatccaacatcttttctataatata
tacacaataataacaacaacaacaatataatagaaaataaattctaaata
aacaagtaaagtggggagctatggttggttcacagcttcagagaattcag
ccccatgtccctgggcagagcatcatggccttagaagtatgttgcgaagg
aaatttgtttacattatgtttatccagaaagtatataacaggaagagtgg
ggggataatcaaggaaaagaaagagcagaggagaccagaacaaatcacct
tggaacttgaatttttaagggatgtcagggaatgtggaattttttaaaga
cgggacttgtctagtgtgtcaaagtatgcctacaaaagccagagcttttg
tgtttaaagactgtttagttaaataaatgttggtgtttaatctaccaccc
ccttttttttttaacaattgcagttaattcttagctttgcaagattatat
gggtaataatggattggaacatcatactttccaactaatgttccaggaaa
ttagagaattattaaatgcacttcctcatttactacaaaggaaaatgtgt
agcgtaaattaaatggtggaagaaattactttcccagagtcaggttctcc
tctttactaccagtacttgtattcctcagtaccgttaggatttagacaat
cctggaactctctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_15242947_15243982
seq2: B6Ng01-126F15.g_69_1083

seq1  GAATTCAATAGCAAGATAAAGAAGGGCATTTTTGATGGAGCAAATTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGCAAGATAAAGAAGGGCATTTTTGATGGAGCAAATTTTAA  50

seq1  TAGACATCATCAAAAATGTAGAAACAGAAAATGATGAAACCTGCTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATCATCAAAAATGTAGAAACAGAAAATGATGAAACCTGCTTTTTT  100

seq1  GAAGAAATAGATAGTAATTTCTGAAGAGCATTGAGATGCTTTAAGAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATAGATAGTAATTTCTGAAGAGCATTGAGATGCTTTAAGAAAAG  150

seq1  AACAAGACTAGCTTAAAAGGCTTGCTTTACTTACTTATTGTGACTCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGACTAGCTTAAAAGGCTTGCTTTACTTACTTATTGTGACTCTGTC  200

seq1  AGATGCCTAACAAAAAACACAAAAGTGGGGCTGGAGAGAAGACTCAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCTAACAAAAAACACAAAAGTGGGGCTGGAGAGAAGACTCAGAGA  250

seq1  TTGAGAATGAAACCATGTTTGGTTCTTGGCTTCCCCTCAGGTATCTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATGAAACCATGTTTGGTTCTTGGCTTCCCCTCAGGTATCTCATA  300

seq1  GCCACCATCAACTCCAGATCCAGCAGATCCAACATCTTTTCTATAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATCAACTCCAGATCCAGCAGATCCAACATCTTTTCTATAATATA  350

seq1  TACACAATAATAACAACAACAACAATATAATAGAAAATAAATTCTAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATAATAACAACAACAACAATATAATAGAAAATAAATTCTAAATA  400

seq1  AACAAGTAAAGTGGGGAGCTATGGTTGGTTCACAGCTTCAGAGAATTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTAAAGTGGGGAGCTATGGTTGGTTCACAGCTTCAGAGAATTCAG  450

seq1  CCCCATGTCCCTGGGCAGAGCATCATGGCCTTAGAAGTATGTTGCGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGTCCCTGGGCAGAGCATCATGGCCTTAGAAGTATGTTGCGAAGG  500

seq1  AAATTTGTTTACATTATGTTTATCCAGAAAGTATATAACAGGAAGAGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTTTACATTATGTTTATCCAGAAAGTATATAACAGGAAGAGTGG  550

seq1  GGGGATAATCAAGGAAAAGAAAGAGCAGAGGAGACCAGAACAAATCACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATAATCAAGGAAAAGAAAGAGCAGAGGAGACCAGAACAAATCACCT  600

seq1  TGGAACTTGAATTTTTAAGGGATGTCAGGGAATGTGGAATTTTTTAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTGAATTTTTAAGGGATGTCAGGGAATGTGGAATTTTTTAAAGA  650

seq1  CGGGACTTGTCTAGTGTGTCAAAGTATGCCTACAAAAGCCAGAGCTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGACTTGTCTAGTGTGTCAAAGTATGCCTACAAAAGCCAGAGCTTTTG  700

seq1  TGTTTAAAGACTGTTTAGTTAAATTAAATGTTGGTGTTTTAATCTACCAC  750
      ||||||||||||||||||||||| |||||||||||| |||||||||||||
seq2  TGTTTAAAGACTGTTTAGTTAAA-TAAATGTTGGTG-TTTAATCTACCAC  748

seq1  CCCCTTTTTTTTTTAACAATTGCAGTTAATTCTTAGCTTTGCAAGATTAA  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCCCTTTTTTTTTTAACAATTGCAGTTAATTCTTAGCTTTGCAAGATT-A  797

seq1  TATGGGTAATAATGAATGGGAACATCATACTTTCAAACTAATGTTCCAGG  850
      |||||||||||||| || |||||||||||||||| |||||||||||||||
seq2  TATGGGTAATAATGGATTGGAACATCATACTTTCCAACTAATGTTCCAGG  847

seq1  AAAATAGAGAATTAATAAAATGCACTTCTCAATTTACTACAAAAGAAAAT  900
      ||| ||||||||| || |||||||||||   |||||||||||| ||||||
seq2  AAATTAGAGAATT-ATTAAATGCACTTCCTCATTTACTACAAAGGAAAAT  896

seq1  GTATGTAGCGTAAATTAAAT-GTGGAAGAAAATTACTTTCTCAGAGGTCA  949
      |  ||||||||||||||||| ||||||| ||||||||||| |||| ||||
seq2  G--TGTAGCGTAAATTAAATGGTGGAAG-AAATTACTTTCCCAGA-GTCA  942

seq1  GGGTTTCTCCTTCCTTAACTACACAGGTACTTGTATCTCTCAGTAATCTG  999
      ||  |||||||  ||| ||||| || ||||||||||  |||||||  | |
seq2  GG--TTCTCCT--CTTTACTAC-CA-GTACTTGTATTCCTCAGTA--CCG  984

seq1  TTAGGATTTTAAGTACATATTCCCTGGACTTCTCTAC  1036
      |||||||||  || ||| ||  ||||||  |||||||
seq2  TTAGGATTT--AG-ACA-AT--CCTGGAACTCTCTAC  1015


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