BAC Information

Click to search

BAC

Clone NameB6Ng01-126K01
Chromosome6 (Build37)
Map Location 10,905,360 - 10,906,224
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264, LOC100040285, LOC667650
Downstream geneAA545190, Ndufa4, Phf14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126K01.bB6Ng01-126K01.g
ACCDH928946DH928947
length1,253866
definitionDH928946|Mus musculus domesticus DNA, BAC clone: B6Ng01-126K01, 5' end.DH928947|Mus musculus domesticus DNA, BAC clone: B6Ng01-126K01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctttttatttttctaccccattttttattggatattttattca
ttttcatttcaaatgttatcccttttcccgatttcctccctagaaacctc
ctatcccatccaccctcttcctgcttctaggagggtcccccccaatcccc
ttctacctaccctcacacaccaagggtctcccattgatgacaaggccatc
ctctgctacatatgcaggtggagctgtggatccctccatgtgttctcctt
ggttcgtggtttagtctctgggagctctcagggatcttgttggttgatat
ttttgttcttcctatgtggttgcaaaccccttcagctcctccagtccttt
ctctaattccttcaatggggacccagtgctctgtccaatgtttggctgtg
agcatctgcctctgtatttgtcaggctctggcagagcctctctggaggca
gctgtatcaggctcttgtcagcatgaccttctcggcatccacaataatgt
ctgggtttggtgactgtatatgggatggatccaaaggtgcggcagtctct
gcatggcctttccttcggtttctgctatataatttgtctccatatttgct
cccatgagtattttgttttcccttctaagaaggaccaaagcacccatact
ttggtcttccttcttgagcaccatgtggtctgtgaattgtatcttgggta
tttcaagcttttgggttaatattcacttatcagtgagtgcatatcatgtg
tgttctttgtttattgtgttctctcactcaggatgatattttctagctca
atccatttgctgaagcatttcatgaattcattgtgtttaataactgagta
gtactttcattgtgtaaatgtaccacatttcctgtatccattcctctgct
gatgaatatctggggttgtttccagcttctggctattataaataagtctg
ctatgaacatagtagatcatatgtccttgtatatgtttaagaatattttt
ggatatgcccaggagtggttatagctggattctcaggtaataatatgtac
aattctctgaggaacctccaactgacttccagggggtttacaagctgcaa
tcccatcacaatgaggactatttctctttctccattccttttccagacat
ctggctgcaccggagttttttatcctagccacctgacgtgtcatgtgaaa
tccaggggtgatgtattcattcccgaggaacaagtaggttagagacaatt
ctt
gaattcagttgggctcagtttgtgacctttataaaattcagaattaacat
aattcttgatattttgatccatcaaatatattttagtttcagtttgtcaa
tactcaccagattattgctgagattatggtgagttcacactgaatctata
gactaacttaatgataatttgtatcttgacaataataactattcatgtct
agaatatagttatctatttccttgattgtgattttatagttttttttcca
tttaaatagtatatacatcttattgtatctacatggtgatactttattta
ggtattataagtagtaatattcatagcttaaagttacaaatttttattat
tcctatacccaaacaatgctttcagtatattaaccttgtaatatgagcct
tgttatttgagaaaaaccttcttttcctgaatattttcatgaaataccat
tagaaatgatattagctttgtgatttttatacatgttcttcattaaattg
aagaagttgcttctgtttctaattgtctatgtatcttctttgtaataggt
aatgattgggtttttctgacgagtttctactgtgactggttgaccatgtg
attatttttctttaactggatgaaatattctgctctaattggttctaaaa
acttgaaccatcctccatacttgacacaaatgacagcctcccatagtttt
ataatattattttgacatgttggattcactttcctattgtttgctgcaaa
ctttttgattttatggccaagatatatacataaatttttttcattcttta
attctattacttgatttgagtatatgggttatagtgtctgaaactggatt
agaaagtgttcaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10905360_10906224
seq2: B6Ng01-126K01.g_69_934

seq1  GAATTCAGTTGGGCTCAGTTTGTGACCTTTATAAAATTCAGAATTAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGGGCTCAGTTTGTGACCTTTATAAAATTCAGAATTAACAT  50

seq1  AATTCTTGATATTTTGATCCATCAAATATATTTTAGTTTCAGTTTGTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTGATATTTTGATCCATCAAATATATTTTAGTTTCAGTTTGTCAA  100

seq1  TACTCACCAGATTATTGCTGAGATTATGGTGAGTTCACACTGAATCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACCAGATTATTGCTGAGATTATGGTGAGTTCACACTGAATCTATA  150

seq1  GACTAACTTAATGATAATTTGTATCTTGACAATAATAACTATTCATGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACTTAATGATAATTTGTATCTTGACAATAATAACTATTCATGTCT  200

seq1  AGAATATAGTTATCTATTTCCTTGATTGTGATTTTATAGTTTTTTTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAGTTATCTATTTCCTTGATTGTGATTTTATAGTTTTTTTTCCA  250

seq1  TTTAAATAGTATATACATCTTATTGTATCTACATGGTGATACTTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAGTATATACATCTTATTGTATCTACATGGTGATACTTTATTTA  300

seq1  GGTATTATAAGTAGTAATATTCATAGCTTAAAGTTACAAATTTTTATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTATAAGTAGTAATATTCATAGCTTAAAGTTACAAATTTTTATTAT  350

seq1  TCCTATACCCAAACAATGCTTTCAGTATATTAACCTTGTAATATGAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATACCCAAACAATGCTTTCAGTATATTAACCTTGTAATATGAGCCT  400

seq1  TGTTATTTGAGAAAAACCTTCTTTTCCTGAATATTTTCATGAAATACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTGAGAAAAACCTTCTTTTCCTGAATATTTTCATGAAATACCAT  450

seq1  TAGAAATGATATTAGCTTTGTGATTTTTATACATGTTCTTCATTAAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGATATTAGCTTTGTGATTTTTATACATGTTCTTCATTAAATTG  500

seq1  AAGAAGTTGCTTCTGTTTCTAATTGTCTATGTATCTTCTTTGTAATAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTTGCTTCTGTTTCTAATTGTCTATGTATCTTCTTTGTAATAGGT  550

seq1  AATGATTGGGTTTTTCTGACGAGTTTCTACTGTGACTGGTTGACCATGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGGGTTTTTCTGACGAGTTTCTACTGTGACTGGTTGACCATGTG  600

seq1  ATTATTTTTCTTTAACTGGATGAAATATTCTGCTCTAATTGGTTCTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTCTTTAACTGGATGAAATATTCTGCTCTAATTGGTTCTAAAA  650

seq1  ACTTGAACCATCCTCCATACTTGACACAAATGACAGCCTCCCATAG-TTT  699
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACTTGAACCATCCTCCATACTTGACACAAATGACAGCCTCCCATAGTTTT  700

seq1  ATAATATTA-TTTGACATGTTGGATTCACTTTCCTATTGTTTGCTGCAAA  748
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTATTTTGACATGTTGGATTCACTTTCCTATTGTTTGCTGCAAA  750

seq1  C-TTTTGATTTTATGGCCAAGATATATACATATAATTTTTTCATTCTTTT  797
      | |||||||||||||||||||||||||||||| | ||||||||||| |||
seq2  CTTTTTGATTTTATGGCCAAGATATATACATAAATTTTTTTCATTC-TTT  799

seq1  AATTCTATTACTTGATTTGAGTATATGGGTTATAGTGTCCTGAAACTGGA  847
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATTCTATTACTTGATTTGAGTATATGGGTTATAGTGT-CTGAAACTGGA  848

seq1  TTAGAAAGTGTTCAATCT  865
      ||||||||||||||||||
seq2  TTAGAAAGTGTTCAATCT  866