BAC Information

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BAC

Clone NameB6Ng01-126K24
Chromosome6 (Build37)
Map Location 18,835,452 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126K24.bB6Ng01-126K24.g
ACCDH928990DH928991
length9941,174
definitionDH928990|Mus musculus domesticus DNA, BAC clone: B6Ng01-126K24, 5' end.DH928991|Mus musculus domesticus DNA, BAC clone: B6Ng01-126K24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttgttcgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagcccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacatgccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtttctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgttccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttcttcttcagagattgaagtttttatcataca
gatctttcactccttagttagcgttacgccagatatttatactatttgtg
actatgagaggtgtgtttccctaatttcttctcagctgttattc

gaattcaatgaaaatgaaggcacaacatacccaaaattatggaacacaat
gaaagcactgctaagaggaaagttcacagcacaaagtgccttcatacaga
aattggagagatctcacataaacaacttaacagcacatcggaaagctcta
taacaaagataagcaaacacacccaagaggagtagatgacaggaaatagt
caaactcagggctgaaatcaatcaattagaaacaaagagaacaatacaaa
gaatcaacaaaaccaagaggctgttctttgagaaaatcaacaggattgac
aaatccttagtcaaaaaggcacagagacagtgtccaagtgagcaaaatca
gaaatgaaaagggaatcataacaacagaaaatgagggcatttaaaaaaat
cattaggtcttacttgaacagtctgtattccacaaactggaaaatctaaa
taaaatggatgatttctagacagataccacttaccaaagttaaatcaaga
acaggtaaactatataaacagtcctataacccctaaggaaatagaagcag
tcattaaaaatctcctaaacaaaagaagcccagggtcagttgattttagc
acagaattttatcagactttcaaagaagcactaataacaatacttctcaa
actattccacaaaataaaaacagaaaggaacagtaccaaattcattcaat
gaggctacagttaccctgatatctaaaccacacaaagactcaagaaagaa
agaatttcagaccaaacattgaaaccaaaaaataataaaattcttcgcaa
accaaatccaagaaccacatcaaaaacatcattcaccaatgaccaagtag
gctcgtcctagaagatggttccaacatacaaaaattccatcaacatatcc
cacatattaaaaagtgagcctggtggtgttgccgcatgcctttatcccag
cacttgaagcaagcagcagaatttctgagttgaggcagcctgtctcacaa
agtgagtcagaagcccaaggtttaccagaatacccttgttctgaaacaaa
taaataacttataataaaagtgaaaaaccatgtgacctcttattaattcg
aaagccttgcaactctataccctctgtaagtctcgagaaggactactgtc
ctacgacggcagttactccgctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-126K24.b_50_567 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAAGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCATGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGGCTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      |||||||||||||||||||||| || ||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCGAACAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518


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