BAC Information

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BAC

Clone NameB6Ng01-127E02
Chromosome6 (Build37)
Map Location 61,992,646 - 61,993,683
singlet/doubletsinglet
Overlap geneC130092O11Rik
Upstream geneLOC100041756, LOC100041764, LOC100042694
Downstream geneGA_x5J8B7W6GG0-4757855-4757501
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127E02.bB6Ng01-127E02.g
ACCDH929418DH929419
length1,1561,036
definitionDH929418|Mus musculus domesticus DNA, BAC clone: B6Ng01-127E02, 5' end.DH929419|Mus musculus domesticus DNA, BAC clone: B6Ng01-127E02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacgtgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaattaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggaaccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaggagctaaagggatctgcaacccta
taggtgacacatatgactaacagtacccgagctcttgactctagctgcat
atgtatcaaagatggctagtcgcatcactgcaagagagccattgaccgca
acctttaatgccagtacagtgacgcagggcaaaagggggagtgggttggt
agagaa
gaattctcttttgtccacctacagcaaataaatttattagagcctgatat
gatgtaaataaaatgaatgatttatgtcagcttcatgcataggtaagaac
aagcatttactagaatccaaacagcaagaaaaagaacaatctgcagaata
ttatctttaacgtcacatgcatgttatatatatgcatacttacatatgaa
atatattaatttatctgtttagtaagtataaagctgtatcaggaattgac
cagtagttaccatgagtttaataaaatgtgaaactagtaaaaatatctgg
ctggttaagttgaacaaaaaattattatgagaagaacaattttcgactag
tctttacggataatttaccttacatctgacatactaacactgagcacaaa
tactggtgattctatacatgcatcctcatgcattttggtgcccatgtaat
gattacctcttttggacctgccacaatttgtaagaattaaacatttatct
ccccaggaaagtgatacccagagtaatagtgtgtaagctggtgggctcca
gactgcattttgatcatagcagattaacaacgaagcctttcatttcatct
gttgaaataccttttccagatctgctctcatgaataaagaaatcaccaaa
ttctgttaacacactgaagtatgtgggttcagtcacaggctgcagctatt
cagatgtagatgaaagaagtgatgctaacaaatcgcttgttcatggaaac
tgtaaatgctgttatagatacaaaagctagtatatggcctaaatttaggt
taaagccaatgattggacaacctacagtagggaattcctggagaaaaatt
cttaaggtatactcttccagtagactcttcacacagcccctctccccatt
ctcccagttacctctgagaaaggggaagtacccattgtatggccatccag
cctggtgcatcaagaaccaggtacatctttctccttcagccagccagtac
agcccagttaggcaaccgtatccatagccagcaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_61992646_61993683
seq2: B6Ng01-127E02.g_68_1103

seq1  GAATTCTCTTTTGTCCACCTACAGCAAATAAATTTATTAGAGCCTGATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTGTCCACCTACAGCAAATAAATTTATTAGAGCCTGATAT  50

seq1  GATGTAAATAAAATGAATGATTTATGTCAGCTTCATGCATAGGTAAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAAATAAAATGAATGATTTATGTCAGCTTCATGCATAGGTAAGAAC  100

seq1  AAGCATTTACTAGAATCCAAACAGCAAGAAAAAGAACAATCTGCAGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTACTAGAATCCAAACAGCAAGAAAAAGAACAATCTGCAGAATA  150

seq1  TTATCTTTAACGTCACATGCATGTTATATATATGCATACTTACATATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTAACGTCACATGCATGTTATATATATGCATACTTACATATGAA  200

seq1  ATATATTAATTTATCTGTTTAGTAAGTATAAAGCTGTATCAGGAATTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAATTTATCTGTTTAGTAAGTATAAAGCTGTATCAGGAATTGAC  250

seq1  CAGTAGTTACCATGAGTTTAATAAAATGTGAAACTAGTAAAAATATCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTTACCATGAGTTTAATAAAATGTGAAACTAGTAAAAATATCTGG  300

seq1  CTGGTTAAGTTGAACAAAAAATTATTATGAGAAGAACAATTTTCGACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAAGTTGAACAAAAAATTATTATGAGAAGAACAATTTTCGACTAG  350

seq1  TCTTTACGGATAATTTACCTTACATCTGACATACTAACACTGAGCACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACGGATAATTTACCTTACATCTGACATACTAACACTGAGCACAAA  400

seq1  TACTGGTGATTCTATACATGCATCCTCATGCATTTTGGTGCCCATGTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTGATTCTATACATGCATCCTCATGCATTTTGGTGCCCATGTAAT  450

seq1  GATTACCTCTTTTGGACCTGCCACAATTTGTAAGAATTAAACATTTATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACCTCTTTTGGACCTGCCACAATTTGTAAGAATTAAACATTTATCT  500

seq1  CCCCAGGAAAGTGATACCCAGAGTAATAGTGTGTAAGCTGGTGGGCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGAAAGTGATACCCAGAGTAATAGTGTGTAAGCTGGTGGGCTCCA  550

seq1  GACTGCATTTTGATCATAGCAGATTAACAACGAAGCCTTTCATTTCATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCATTTTGATCATAGCAGATTAACAACGAAGCCTTTCATTTCATCT  600

seq1  GTTGAAATACC-TTTCCAGATCTGCTCTCATGAATAAAGAAATCACCAAA  649
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAATACCTTTTCCAGATCTGCTCTCATGAATAAAGAAATCACCAAA  650

seq1  TTCTGTTAACACACTGAAGTATGTGGGTTCAGTCACAGGCTGCAGCTATT  699
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCTGTTAACACACTGAAGTATGTGGGTTCAGTCACAGGCTGCAGCTA-T  699

seq1  TCAGATGTAGATGAAAGAAGTGATGCTAACAAATCGCTTGTTCATGGAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGTAGATGAAAGAAGTGATGCTAACAAATCGCTTGTTCATGGAAA  749

seq1  CTGTAAATGCTGTTATAGATACAAAAGCTAGTATATGGCCTAAATTTAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAATGCTGTTATAGATACAAAAGCTAGTATATGGCCTAAATTTAGG  799

seq1  TTAAAGCCAATGATTGGACAAACTACAGTA-GGAAATCCTGGAGAGATAT  848
      ||||||||||||||||||||| |||||||| |||| ||||||||| | ||
seq2  TTAAAGCCAATGATTGGACAACCTACAGTAGGGAATTCCTGGAGAAAAAT  849

seq1  TCTT-AGGTATACTCTTCCCAGTAGACCTCTCACACAGCCCCTCT-CTCA  896
      |||| |||||||||||| |||||||||   ||||||||||||||| | ||
seq2  TCTTAAGGTATACTCTT-CCAGTAGACTCTTCACACAGCCCCTCTCCCCA  898

seq1  TTCTCCCAGTTACCTCTGAGAAGGGGGAGGTACCCATTGTATGCCAATCC  946
      |||||||||||||||||||||| ||||| |||||||||||||| | ||||
seq2  TTCTCCCAGTTACCTCTGAGAAAGGGGAAGTACCCATTGTATGGCCATCC  948

seq1  AGCCTGGTGCATCAAGACACAGGTACATCCTTTCCCTTTCAAGCCAGCCA  996
      |||||||||||||||||  ||||||||| ||||| | ||| |||||||||
seq2  AGCCTGGTGCATCAAGAACCAGGTACAT-CTTTCTCCTTC-AGCCAGCCA  996

seq1  GTACAGCCCAGTTAGGCAAACAGTATCCATAGGCAGGCAACA  1038
      ||||||||||||||||| ||| |||||||||| || ||||||
seq2  GTACAGCCCAGTTAGGC-AACCGTATCCATAGCCA-GCAACA  1036