BAC Information

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BAC

Clone NameB6Ng01-128A01
Chromosome6 (Build37)
Map Location 134,404,657 - 134,543,089
singlet/doubletdoublet
Overlap geneLrp6
Upstream geneEG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6, LOC100043660, Bcl2l14
Downstream geneMansc1, Loh12cr1, LOC100043884, Dusp16, Crebl2, Gpr19, Cdkn1b, 1190002F15Rik, Apold1, Ddx47, Gprc5a, Gprc5d, LOC100043668, Hebp1, 8430419L09Rik, Gsg1, Pbp2, LOC100043890, Emp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128A01.bB6Ng01-128A01.g
ACCDH929967DH929968
length1,176832
definitionDH929967|Mus musculus domesticus DNA, BAC clone: B6Ng01-128A01, 5' end.DH929968|Mus musculus domesticus DNA, BAC clone: B6Ng01-128A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,404,657 - 134,405,852)(134,542,260 - 134,543,089)
sequence
gaattcatctaacacgatatgcactttaacagtgtaaagaaagcaagagc
gtgcttactgcagggaagtaagtgcctttggtactggaagaactgcttga
ggaggctcccgtgacgtgcgctcgatcataggggggcccactgcttcccc
ccatgatactgagggaactgatcattgatttgcctcgagacattcctgaa
ggaaagaaaaatgaagggtgagtaacatttataaaaatacacgaaacagc
taatcaacactctagttagaagaacatcaactaaagcaacatccaccctc
ttttcctcctaacagctgtaaagagttcatggaaaagggaaatgaacgtc
caaaccatgggcttcactgagaactggcctcaagtaaggccaagcagctc
ccacctgactctgtccgtggaaacagcccttcaaagtaagcacctctcat
ggaagacttaaggaaagaactgtgggggtgaagactgtaaaccagagtag
gtcaagccagcagataagcgccaaagaatgccaagtgtttttataagaca
gacacaatgcatagaagacacttcttttttggtttttcgagacagggttt
ctctgtgtagccctggctgtcctggaactcactctgtagaccaggctggc
ctcaaactcagaaatccacctgcctctgcctcccgagtgctgggaaagaa
aacaccactttacctacagaactcagacacctctgaactcaaagctccta
atgctaatatacaagttctgtttgttccaagtagggtcccattcccactg
caagtaggtacggcaacaaagacgcatcattactcaccagcttaaatagt
gtggctcttctgagagtcacaaccatagtaaattcctattttcagagagc
tctgaccaggcatctcctccagatgcataaaaacccaagattcttttcac
taaaggcactaagcactagggaaagctttactcctcaagaatatatagtc
aggcggacatctggctaatctacttcacactcacacactgtcagcatgtt
agatcaggagagggcacaggactatattccttcttgcactagctatttcc
gatcttgttggtgaagcaacctgagctgtctccactccttattcctacac
tcaagcgccctagtcccttcgatgaa
gaattcatgggcagttgtaagccccggaacgtgcatgctgggacctaaat
caggtcctctggaagaccaggaaaagagccgtctctagccctgctcaact
tgttcttatgtcaaatatagcttgctaaatggcctgtttgcctgagttca
gggaagtagtcactttggttataaagaaattaaggcccatacgtctactg
gacattcaaatgttcacacacacacacacacacacacacacacacacaca
cacacacacacaaaccaaagaaagaaacaacaagaaaacaacccccccat
actcattaggaaagacattctcactagaggaagcaacgctggtatccaac
tacattgttactttggatcaagggacttccattctccacccactcctgcg
tgaaaatcaggttcctttttgaactttgaagtgtgtgttaacatctgcag
gcatcctaagggaaattggcacgaggtacatcgtgaatgctatttttaat
tccgcagggggggaggggcaaggataaattaagtttctctgtatgaaact
tggaatagaaatgcttttcagaagtctacttaaacaaaaagaaaaaaggt
tttcacggccaccaacaaacacaagagcccccaccactcgtaatctccat
acagcgtatgatcaggctatgataataaatcctggatgttggtgagcttg
ccaaaaacttttttcctctttctttttaaaatactcattttatttttgtt
tttatgtccatggatgtttgcctgcatgtatgtttatgtaccgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_134404657_134405852
seq2: B6Ng01-128A01.b_39_1214

seq1  GAATTCATCTAACACGATATGCACTTTAACAGTGTAAAGAAAGCAAGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTAACACGATATGCACTTTAACAGTGTAAAGAAAGCAAGAGC  50

seq1  GTGCTTACTGCAGGGAAGTAAGTGCCTTTGGTACTGGAAGAACTGCTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTACTGCAGGGAAGTAAGTGCCTTTGGTACTGGAAGAACTGCTTGA  100

seq1  GGAGGCTCCCGTGACGTGCGCTCGATCATAGGGGGGCCCACTGCTTCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTCCCGTGACGTGCGCTCGATCATAGGGGGGCCCACTGCTTCCCC  150

seq1  CCATGATACTGAGGGAACTGATCATTGATTTGCCTCGAGACATTCCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATACTGAGGGAACTGATCATTGATTTGCCTCGAGACATTCCTGAA  200

seq1  GGAAAGAAAAATGAAGGGTGAGTAACATTTATAAAAATACACGAAACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAAAAATGAAGGGTGAGTAACATTTATAAAAATACACGAAACAGC  250

seq1  TAATCAACACTCTAGTTAGAAGAACATCAACTAAAGCAACATCCACCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAACACTCTAGTTAGAAGAACATCAACTAAAGCAACATCCACCCTC  300

seq1  TTTTCCTCCTAACAGCTGTAAAGAGTTCATGGAAAAGGGAAATGAACGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCCTAACAGCTGTAAAGAGTTCATGGAAAAGGGAAATGAACGTC  350

seq1  CAAACCATGGGCTTCACTGAGAACTGGCCTCAAGTAAGGCCAAGCAGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATGGGCTTCACTGAGAACTGGCCTCAAGTAAGGCCAAGCAGCTC  400

seq1  CCACCTGACTCTGTCCGTGGAAACAGCCCTTCAAAGTAAGCACCTCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGACTCTGTCCGTGGAAACAGCCCTTCAAAGTAAGCACCTCTCAT  450

seq1  GGAAGACTTAAGGAAAGAACTGTGGGGGTGAAGACTGTAAACCAGAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACTTAAGGAAAGAACTGTGGGGGTGAAGACTGTAAACCAGAGTAG  500

seq1  GTCAAGCCAGCAGATAAGCGCCAAAGAATGCCAAGTGTTTTTATAAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGCCAGCAGATAAGCGCCAAAGAATGCCAAGTGTTTTTATAAGACA  550

seq1  GACACAATGCATAGAAGACACTTCTTTTTTGGTTTTTCGAGACAGGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAATGCATAGAAGACACTTCTTTTTTGGTTTTTCGAGACAGGGTTT  600

seq1  CTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGC  650

seq1  CTCAAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGAAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGAAAGAA  700

seq1  AACACCACTTTACCTACAGAACTCAGACACCTCTGAACTCAAAGCTCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCACTTTACCTACAGAACTCAGACACCTCTGAACTCAAAGCTCCTA  750

seq1  ATGCTAATATACAAGTTCTGTTTGTTCCAAGTAGGGTCCCATTCCCACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAATATACAAGTTCTGTTTGTTCCAAGTAGGGTCCCATTCCCACTG  800

seq1  CAAGTAGGTACGGCAACAAAGACGCATCATTACTCACCAGCTTAAATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAGGTACGGCAACAAAGACGCATCATTACTCACCAGCTTAAATAGT  850

seq1  GTGGCTCTTCTGAGAGTCACAACCATAGTAAATTCCTATTTTCAGAGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCTTCTGAGAGTCACAACCATAGTAAATTCCTATTTTCAGAGAGC  900

seq1  TCTGACCAGGCATCTCCTCCAGATGCATAAAAACCCAGGATTCTTTTCAC  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTGACCAGGCATCTCCTCCAGATGCATAAAAACCCAAGATTCTTTTCAC  950

seq1  TAAAGGCACTAAGCACTAGGGAAAGCTTTACTCCCCAAGAATATTATAGC  1000
      |||||||||||||||||||||||||||||||||| |||||||| ||||| 
seq2  TAAAGGCACTAAGCACTAGGGAAAGCTTTACTCCTCAAGAATA-TATAGT  999

seq1  CAGGCGGGAACATCTGGCTAACCCACCTCACACCTCACACCACTGTCAGC  1050
      |||||||  |||||||||||| | || ||||| |||||| ||||||||||
seq2  CAGGCGG--ACATCTGGCTAATCTACTTCACA-CTCACA-CACTGTCAGC  1045

seq1  ATGTTAGATCAGGAGAGGGCACAGGGGACTATATTCTCTCCTTGCCAACC  1100
      |||||||||||||||||||||||  ||||||||||| || |||||  || 
seq2  ATGTTAGATCAGGAGAGGGCACA--GGACTATATTC-CTTCTTGC--ACT  1090

seq1  AGCTATTTCCAAATCCTTGTTTGTGGACAGCAAACTGAGCTGTCTTCCCA  1150
      |||||||||| |   |||||| |||   ||||| |||||||||||  |||
seq2  AGCTATTTCCGA--TCTTGTTGGTG--AAGCAACCTGAGCTGTCT--CCA  1134

seq1  CTCCTTTATTCCTACACTCATAGCCTCAGGGTCCCCCTTCGATGAA  1196
      |||| ||||||||||||||| |||  |   ||  ||||||||||||
seq2  CTCC-TTATTCCTACACTCA-AGCGCCCTAGT--CCCTTCGATGAA  1176

seq1: chr6_134542260_134543089
seq2: B6Ng01-128A01.g_67_898 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACACGGTACATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACGGTACATAAA  50

seq1  CATACATGCAGGCAAACATCCATGGACATAAAAAC-AAAATAAAATGAGT  99
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CATACATGCAGGCAAACATCCATGGACATAAAAACAAAAATAAAATGAGT  100

seq1  ATTTTAAAAAGAAAGAGG-AAAAAGTTATTGGCAAGCTCACCAACATCCA  148
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  ATTTTAAAAAGAAAGAGGAAAAAAGTTTTTGGCAAGCTCACCAACATCCA  150

seq1  GGATTTATTATCATAGCCTGATCATACGCTGTATGGAGATTACGAGTGGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTATTATCATAGCCTGATCATACGCTGTATGGAGATTACGAGTGGT  200

seq1  GGGGGCTCTTGTGTTTGTTGGTGGCCGTGAAAACCTTTTTTCTTTTTGTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTCTTGTGTTTGTTGGTGGCCGTGAAAACCTTTTTTCTTTTTGTT  250

seq1  TAAGTAGACTTCTGAAAAGCATTTCTATTCCAAGTTTCATACAGAGAAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGACTTCTGAAAAGCATTTCTATTCCAAGTTTCATACAGAGAAAC  300

seq1  TTAATTTATCCTTGCCCCTCCCCCCCTGCGGAATTAAAAATAGCATTCAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTATCCTTGCCCCTCCCCCCCTGCGGAATTAAAAATAGCATTCAC  350

seq1  GATGTACCTCGTGCCAATTTCCCTTAGGATGCCTGCAGATGTTAACACAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTACCTCGTGCCAATTTCCCTTAGGATGCCTGCAGATGTTAACACAC  400

seq1  ACTTCAAAGTTCAAAAAGGAACCTGATTTTCACGCAGGAGTGGGTGGAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAGTTCAAAAAGGAACCTGATTTTCACGCAGGAGTGGGTGGAGA  450

seq1  ATGGAAGTCCCTTGATCCAAAGTAACAATGTAGTTGGATACCAGCGTTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGTCCCTTGATCCAAAGTAACAATGTAGTTGGATACCAGCGTTGC  500

seq1  TTCCTCTAGTGAGAATGTCTTTCCTAATGAGTATGGGGGGGTTGTTTTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTAGTGAGAATGTCTTTCCTAATGAGTATGGGGGGGTTGTTTTCT  550

seq1  TGTTGTTTCTTTCTTTGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTCTTTCTTTGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  600

seq1  TGTGTGTGTGTGTGTGTGAACATTTGAATGTCCAGTAGACGTATGGGCCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGAACATTTGAATGTCCAGTAGACGTATGGGCCT  650

seq1  TAATTTCTTTATAACCAAAGTGACTACTTCCCTGAACTCAGGCAAACAGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTTTATAACCAAAGTGACTACTTCCCTGAACTCAGGCAAACAGG  700

seq1  CCATTTAGCAAGCTATATTTGACATAAGAACAAGTTGAGCAGGGCTAGAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAGCAAGCTATATTTGACATAAGAACAAGTTGAGCAGGGCTAGAG  750

seq1  ACGGCTCTTTTCCTGGTCTTCCAGAGGACCTGATTTAGGTCCCAGCATGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTCTTTTCCTGGTCTTCCAGAGGACCTGATTTAGGTCCCAGCATGC  800

seq1  ACGTTCCGGGGCTTACAACTGCCCATGAATTC  830
      ||||||||||||||||||||||||||||||||
seq2  ACGTTCCGGGGCTTACAACTGCCCATGAATTC  832