BAC Information

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BAC

Clone NameB6Ng01-130G24
Chromosome6 (Build37)
Map Location 116,788,454 - 116,789,511
singlet/doubletsinglet
Overlap genenone
Upstream geneMbd4, Ift122, Rho, H1foo, Plxnd1, Tmcc1, LOC100043425, EG666634, EG666648, D6Wsu116e, Anubl1, March8, Alox5, LOC100043432, Olfr211, Olfr212, Olfr213, EG434080, Olfr214, Olfr215, Zfp422, Rassf4, 8430408G22Rik, C230095G01Rik
Downstream geneLOC100043439, Cxcl12, LOC213422, EG640142, LOC100043777, LOC621462, EG640370, EG621705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130G24.bB6Ng01-130G24.g
ACCDH931751DH931752
length1,064932
definitionDH931751|Mus musculus domesticus DNA, BAC clone: B6Ng01-130G24, 5' end.DH931752|Mus musculus domesticus DNA, BAC clone: B6Ng01-130G24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggcctcaaattcagaaatcttcctgtc
tctgcctccctagtgctgggattaaaggcgagcgccaccacgatgttttt
gctatttgtttttttttcttctgagatgctgttcttttatttgcttttaa
gtactttcacaattgcttactggaggatttttatgttggctaagagataa
ctctacatcttgatccaaaggcagcagaaggagacggggccacattgggg
cgtagcttgagcatttgagaccttaaaattctcacagtgacacacttcct
ctgccaaggccacacctactccaacaaggccatatctcctaataatgcca
cattctatggacctatggatacggggaagaaccagtgcagtgtgtccagg
gtgtctcagagagaagcgagtgcctgacatggacggggtcagacctatct
ttccaacacccacgatctcttctcattttttgactgtctttttttttttt
tttattcacattgaagtcctcttagtctgaatgtgttttttgatccccag
gcacctaggatactgtctggaagctctgggttctgacctaattttgcctt
ttagccggtatcttcagacagcattccatcctcacctggacagatgtttt
gcttactactgtgcagcgatgtgcccgctgacactttggagaatctggga
ggaggtggggacacaccattgatgtgtgccaaaggtgaaatcccagactt
ccttttttacttaggagtgaaaggagcagtctcattatactttttgaaag
agtgacaatagagacttcccatctagctcttgctgttggggaggaaaggt
ggattgtggctttcttctgtggtcttcctactagagtttatatctactgt
ccaaaatatgtcttgtaaatagctccatttctgtcccctagactagccaa
aatgagaatgttgtaatcactggactatcttgggactttgacgcttccaa
tggataacccagaaattattatcattaaagtaggctttagccttagctga
ctacctacggctag
gaattcaaaagaacaatgtaagaaattcaaagacataaatatactccaaa
aagtacaaaacagagctgaatgaaatgagggagtcaaacagatatataaa
agtagaagcagaattgctaaaggaagcccaaacaaaagatgttggaaagg
aaaataccaataagtcaaagcaaaaagcaaaaggtccctcagtggaaaac
ctctcctgcagaatgagggagggaaactcacaagggagtggaagtggctc
agcacttggtgcaaaaaaaagaaagaaggagagaaagtaaagggggctgg
agagatggatcagtgggtgaaagcacctactgctcttccagaggtcctgg
tttcaagtcccagcgatcacatgatggctcacaactatctgtaatgggtt
tcaatgccctcttctggtgtgacagaagacaactacagtgtactcatata
cataaaataaatctttaaaaagtagaaagtgggaaggcttggtgaggaca
acaggaaaagacctaagcttcatattttgggaagatattaaaggatatta
aagagatattaaaaggagagagagagagagagagagagagagagagagag
agagatcacttataaatgcaggtctatcagaataacacctgaataatacc
tgattattttgacagaaaacattgaaagccagaagggccagggaaaaatg
tatttcaagtttctgaaagacaggtgtcaacccagaatataataccttga
aaaactattaagtttgaaggtgaagttaaaagtaacaagacaaaacacac
taaaggaatttttgagaactaagccagctctgccgagggtattgggaagg
aattatttttagtcttgaaagccaagtataacccacccaagaggtcatga
atgaataaccaaaatgttcagtaagttaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_116788454_116789511
seq2: B6Ng01-130G24.b_46_1109

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCAAATTCAGAAATCTTCCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCAAATTCAGAAATCTTCCTGTC  50

seq1  TCTGCCTCCCTAGTGCTGGGATTAAAGGCGAGCGCCACCACGATGTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCTAGTGCTGGGATTAAAGGCGAGCGCCACCACGATGTTTTT  100

seq1  GCTATTTGTTTTTTTTTCTTCTGAGATGCTGTTCTTTTATTTGCTTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTGTTTTTTTTTCTTCTGAGATGCTGTTCTTTTATTTGCTTTTAA  150

seq1  GTACTTTCACAATTGCTTACTGGAGGATTTTTATGTTGGCTAAGAGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTCACAATTGCTTACTGGAGGATTTTTATGTTGGCTAAGAGATAA  200

seq1  CTCTACATCTTGATCCAAAGGCAGCAGAAGGAGACGGGGCCACATTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACATCTTGATCCAAAGGCAGCAGAAGGAGACGGGGCCACATTGGGG  250

seq1  CGTAGCTTGAGCATTTGAGACCTTAAAATTCTCACAGTGACACACTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGCTTGAGCATTTGAGACCTTAAAATTCTCACAGTGACACACTTCCT  300

seq1  CTGCCAAGGCCACACCTACTCCAACAAGGCCATATCTCCTAATAATGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAAGGCCACACCTACTCCAACAAGGCCATATCTCCTAATAATGCCA  350

seq1  CATTCTATGGACCTATGGATACGGGGAAGAACCAGTGCAGTGTGTCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATGGACCTATGGATACGGGGAAGAACCAGTGCAGTGTGTCCAGG  400

seq1  GTGTCTCAGAGAGAAGCGAGTGCCTGACATGGACGGGGTCAGACCTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCAGAGAGAAGCGAGTGCCTGACATGGACGGGGTCAGACCTATCT  450

seq1  TTCCAACACCCACGATCTCTTCTCATTTTTTGACTGTCTTTTTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACACCCACGATCTCTTCTCATTTTTTGACTGTCTTTTTTTTTTTT  500

seq1  TTTATTCACATTGAAGTCCTCTTAGTCTGAATGTGTTTTTTGATCCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCACATTGAAGTCCTCTTAGTCTGAATGTGTTTTTTGATCCCCAG  550

seq1  GCACCTAGGATACTGTCTGGAAGCTCTGGGTTCTGACCTAATTTTGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTAGGATACTGTCTGGAAGCTCTGGGTTCTGACCTAATTTTGCCTT  600

seq1  TTAGCCGGTATCTTCAGACAGCATTCCATCCTCACCTGGACAGATG-TTT  649
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTAGCCGGTATCTTCAGACAGCATTCCATCCTCACCTGGACAGATGTTTT  650

seq1  GCTTACTACTGTGCAGCGATGTGCCCGCTGACACTTTGGAGAATCTGGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTACTGTGCAGCGATGTGCCCGCTGACACTTTGGAGAATCTGGGA  700

seq1  GGAGGTGGGGACACACCATTGATGTGTGCCAAAGGTGAAATCCCAGACTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGGGGACACACCATTGATGTGTGCCAAAGGTGAAATCCCAGACTT  750

seq1  CCTTTTTCACTTAGGAGTGAAAGGAGCAGTCTCATTATAC-TCTTGAAAG  798
      ||||||| |||||||||||||||||||||||||||||||| | |||||||
seq2  CCTTTTTTACTTAGGAGTGAAAGGAGCAGTCTCATTATACTTTTTGAAAG  800

seq1  AGTGACAATAGAGACTTCCCATCTAGCCCTTGCTGTT-GGGAGG-AAGGT  846
      ||||||||||||||||||||||||||| ||||||||| |||||| |||||
seq2  AGTGACAATAGAGACTTCCCATCTAGCTCTTGCTGTTGGGGAGGAAAGGT  850

seq1  GGA-TGTGGCTTTCTTCTGTGGTCTT-CTACTAGAGTTTAATATCTACTG  894
      ||| |||||||||||||||||||||| |||||||||||| ||||||||||
seq2  GGATTGTGGCTTTCTTCTGTGGTCTTCCTACTAGAGTTT-ATATCTACTG  899

seq1  TCCAAAATATGTCTTGTAAATAGCTCCATTTCTGTCCCCTAGACTAGCGA  944
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCCAAAATATGTCTTGTAAATAGCTCCATTTCTGTCCCCTAGACTAGCCA  949

seq1  AAATGAG-ATGTTGT-ATCACTGGACTATCTT-GGAC-TTGACAGCTCCC  990
      ||||||| ||||||| |||||||||||||||| |||| ||||| ||| ||
seq2  AAATGAGAATGTTGTAATCACTGGACTATCTTGGGACTTTGAC-GCTTCC  998

seq1  AAATGATAACACAGAAATTTATTATCATTTAATGTA-GCTTAAGCCTTAG  1039
      ||  |||||| |||||| ||||||||| |||| ||| |||| ||||||||
seq2  AATGGATAACCCAGAAA-TTATTATCA-TTAAAGTAGGCTTTAGCCTTAG  1046

seq1  CTGACTACCTACAGGCTAG  1058
      |||||||||||| ||||||
seq2  CTGACTACCTAC-GGCTAG  1064