MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-130J12
Chromosome	6 (Build37)
Map Location	103,589,309 - 103,590,379
singlet/doublet	singlet
Overlap gene	Chl1
Upstream gene	LOC666141
Downstream gene	LOC100043345, Cntn6
Link	Open Mouse BAC browser

Click to get alignment info.

name	Chl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12661 MGI:1098266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666141 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666141
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100043345 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043345
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Cntn6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53870 MGI:1858223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347544 GeneID:12661 MGI:1098266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule with homology to L1CAM transcript_id : NM_007697.2

name	Cntn6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50233919 GeneID:53870 MGI:1858223
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin 6 transcript_id : NM_017383.3

name	Chl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347545 GeneID:12661 MGI:1098266
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007610 - behavior [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0031175 - neurite development [Evidence IDA]; GO:0001764 - neuron migration [Evidence IMP] codon_start : 1 note : close homolog of L1 product : cell adhesion molecule with homology to L1CAM protein_id : NP_031723.2

name	Cntn6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980846 CCDS:CCDS20394.1 GeneID:53870 MGI:1858223
definition	GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007219 - Notch signaling pathway [Evidence IEA] codon_start : 1 note : neural recognition molecule NB-3 product : contactin 6 protein_id : NP_059079.2

name	LOC666141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666141
definition	number : 2 pseudo : _no_value

name	LOC666141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666141
definition	number : 1 pseudo : _no_value

name	LOC100043345 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043345
definition	number : 2 pseudo : _no_value

name	LOC100043345 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043345
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:211163
definition	standard_name : RH127853

name	(CDS detail)
type	STS
link
xref	UniSTS:266902
definition	standard_name : DBX

name	(CDS detail)
type	STS
link
xref	UniSTS:125746
definition	standard_name : U42386

name	(CDS detail)
type	STS
link
xref	UniSTS:130799
definition	standard_name : D6Mit250

name	(CDS detail)
type	STS
link
xref	UniSTS:123646
definition	standard_name : 24.MMHAP4FRH9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:159550
definition	standard_name : AI465420

name	(CDS detail)
type	STS
link
xref	UniSTS:130966
definition	standard_name : D6Mit64

name	(CDS detail)
type	STS
link
xref	UniSTS:125213
definition	standard_name : MHAa54c9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123332
definition	standard_name : 17.MMHAP15FRF8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130649
definition	standard_name : D6Mit106

name	(CDS detail)
type	STS
link
xref	UniSTS:123494
definition	standard_name : 20.MMHAP85FLG2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130911
definition	standard_name : D6Mit36

name	(CDS detail)
type	STS
link
xref	UniSTS:123769
definition	standard_name : 27.MHAa93g3.seq

clone name	MSMg01-050B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290I17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-109H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154P02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-209C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354P03
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-308I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330H13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-130J12.b	B6Ng01-130J12.g
ACC	DH931868	DH931869
length	1,099	1,067
definition	DH931868\|Mus musculus domesticus DNA, BAC clone: B6Ng01-130J12, 5' end.	DH931869\|Mus musculus domesticus DNA, BAC clone: B6Ng01-130J12, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcctaggggtcgaggggaagcaagcaatttgagtgcccacattcat ctctgtttcctggctatgtttgcgacatgaccagccaatttatgcttttg ccaacaagccttcttgctgtggtggactgtaaaatcacttaaaccacgag gcaaaatatgtccttatgttgttaaggtgccttctgccagatatttaatg acagaagtgacaaaggtaactagtataagaatcttgctcaatttaacagt gttgattcttcagatccatgaacatagggttgtttttttttttaatttat ttatttttctgtcttctctataattctagcagcaattgaggtttttatta ttgatgtttcccttccttggttatatgtattgctaagatatgttttagct gttatgagggattgttggttttttctttcacaaagtccattactgtcacg taaatgtgatattctacaacactgatctttgtaggctgaagctttactaa gatcagttctcacacctttttaatagaatgttgaggtttttctatatggg caatcatattctctaaaaacatgggtaatttaactccttttcactttcgc aaatccttacctcttgctcttgctcttgttaatactttcaattgtataaa aagttctaaaagttttggtccttgccacagtcctggtcttataagaaaca cttaccagtccaatgtgatattagctatactatctttcccatgttattta ttgtgtgtgtatgtatgtatatgtgtgactgtatatgcacacactcttgc acatacatgcctgtgatatggcacatgggaggaagtcagagaacaaccta tgtgagttgattctcttgtcatgtggatcccagaaagagaactgtgattg gtaggttggcagcaagcattctttactctctgatccagctcaacagctga tttttcacaaacagcatttagtatttgaggtatattcctagtatacctgt tatatggaggaattttatcataagaagatgtggagtttaccaaattttac catacttacaaaaatattggttgtattgttgttgtagtggacatgttgg	gaattcaattgctaacactgcaaaaccaaaagatattaagaggtaactga gcctgttcatctcagtttcttttgctgtggctatgacgataaaaatactc tgacaacttaaaaggtcagtacagtctatatcatgactgagaaatcaagg cagcaagagcttcgagagccaggtcacattgccttcaatctagaaacaga catgagtgtaagcctgtggctgttctttttcctttgcaacatacagagtc cacaatcctagccagggattagtgccatccactcagatgggctttctcac cccaactaccacactagagataacgtccccaaagaatagccataggcata gctcctagggaattctagattctgtcaagttgacaacactagacatcact tgtatcttccctatacatgactaatggcatttaaagtgctaaatagacaa ataaataaatacacccaaatccaaacaaacaaaaaattccaaacaaaagc aaggaacacacacacacacacacacacacacacacacacacacacacaca tctgagttctacacattagcataaagattcaaaacactctgtctagttta aaattgaaatctctaaagaaaatattaacatttttccctttgaattttcc tttcctttcttcgtatacacacacacacacacacacacacacacatttat atatctcataatatatatgtatgtatacatgcatatatatatgtatatat gatgatttagggcatactcattgtcagcagctcctttttgtacattgaca ttgagcaactttacaatgaccttgaagcacaggttctcttttaataacaa ttttctcagaagatattaattagaaaacatttttattttatgattatatt tttgccagattaatttgtccatctgaaaaaatgggaatcttgaaaaccag ttaccttgctaagaacatttacaagtatgataccttaaggaaatatcact gatgattgaccgctctttccttgtgaaatgactaaatgtatcaacataat tgcataagaaattgctt
quality values	Open. Hide. 57 41 24 36 57 57 61 61 42 61 61 61 43 61 61 61 61 61 61 61 61 61 61 61 61 61 14 19 37 10 14 29 29 31 22 43 52 61 47 61 61 61 61 61 61 55 55 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 55 44 28 44 44 59 59 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 59 59 59 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 43 61 55 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 55 61 55 61 55 55 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 55 61 61 55 61 61 61 61 61 52 61 53 61 61 61 61 61 61 47 53 61 50 61 53 61 61 47 61 45 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 50 53 61 61 61 61 50 61 61 50 61 47 61 61 61 61 52 61 53 61 61 61 53 42 47 61 61 61 52 45 53 53 61 61 61 61 61 50 61 52 47 61 53 53 53 61 61 53 53 53 52 57 57 50 53 50 45 57 57 38 50 53 53 38 53 57 47 57 47 50 35 57 47 57 57 43 53 52 50 57 57 57 57 38 43 45 40 45 42 57 53 53 35 40 57 57 47 47 47 38 43 46 32 53 47 47 47 26 42 47 32 50 38 53 45 46 57 34 45 33 32 39 45 50 51 29 37 31 27 40 34 43 52 53 42 42 32 28 27 43 32 30 19 45 42 52 24 53 40 31 42 42 40 52 28 52 50 45 33 34 45 42 50 24 47 32 23 32 23 57 37 33 16 21 10 7 12 17 57 28 53 31 53 41 18 43 34 57 45 37 19 38 45 57 35 52 24 41 30 53 42 50 38 29 22 22 8 16 30 30 45 57 27 52 42 24 22 27 36 23 34 17 45 16 32 50 28 10 38 50 30 21 38 30 42 36 38 35 40 48 23 27 30 44 20 40 34 15 34 29 28 35 28 28 27 38 28 20 57 34 25 7 30 40 40 12 30 21 24 9 52 8 57 21 20 33 36 33 34 34 42 33 18 14 17 37 19 35 40 32 22 17 33 25 37 31 23 20 25 16 32 21 30 52 24 41 8 29 25 16 52 33 30 31 44 57 44 12 26 8 25 29 10 21 33 24 33 37 14 32 40 18 8 33 27 28 33 40 30 30 18 31 7 21 11 20 13 18 9 10 20 18 32 51 24 20 34 28 28 12 19 18 19 36 13 23 25 20 18 11 30 28 34 9 18 21 20 28 30 23 29 22 46 41 44 30 27 12 15 10 5 5 21 29 35 34 35 27 51 33 23 14 15 22 29 51 46 18 31 20 51 8 16 9 10 27 24 28 33 17 23 13 14 16 23 17 23 25 21 48 15 27 12 5 12 16 27 14 14 5 5 21 23 8 23 29 20 46 21 11 6 20 7 5 7 11 29 6 15 5 18 30 8 7 10 22 43 43 36 12 32 17 11 30 29 14 10 39 22 9 8 27 9 13 10 9 9 10 5 14 10 10 9 7 5 12 11 9 8 7 5 5 12 8 14 17 22 5 13 18 6 11 10 12 8 7 4 5 10 7 9 9 11 11 14 10 10 9 6 5	Open. Hide. 55 47 52 55 52 29 17 21 32 39 23 20 36 33 33 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 61 59 61 61 61 59 61 61 59 59 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 50 61 61 61 52 61 53 61 53 61 42 47 61 61 61 61 53 57 57 57 53 47 47 57 53 57 57 57 57 57 45 57 57 57 45 57 53 57 53 42 38 57 57 53 53 57 53 53 45 50 47 53 52 47 53 57 57 47 35 57 57 53 52 53 53 53 53 53 45 53 57 57 53 57 53 53 53 47 53 52 53 50 53 47 53 50 53 47 53 50 53 52 53 52 52 45 47 47 53 50 53 50 53 45 57 57 57 50 57 53 57 53 52 47 57 47 52 37 57 53 53 53 57 30 38 52 53 45 45 50 30 53 30 53 52 53 38 53 42 40 29 46 46 33 37 23 52 39 28 53 53 36 50 33 52 37 53 50 46 34 50 23 24 30 24 23 19 31 23 20 11 9 10 23 20 57 36 40 48 31 38 33 38 52 46 21 37 57 57 47 34 33 24 34 33 38 36 36 30 57 57 57 39 39 57 53 27 53 35 32 26 18 27 57 57 37 37 26 17 57 15 26 37 33 57 30 30 31 12 29 32 31 34 40 27 53 31 53 30 53 27 46 30 45 29 46 30 47 21 46 20 30 27 40 22 37 14 46 21 37 28 44 27 31 51 48 29 30 30 28 30 44 48 39 32 31 21 33 51 29 29 29 29 29 29 27 48 17 22 14 34 15 19 22 27 44 19 21 25 24 28 29 24 29 32 29 25 29 27 28 33 14 28 29 29 28 14 14 25 29 12 29 28 28 43 33 24 25 43 24 14 8 16 15 29 35 32 14 30 20 36 18 19 7 15 29 19 20 29 28 25 19 10 46 39 51 19 29 16 22 28 15 29 30 33 27 21 15 21 31 28 20 15 29 14 26 28 31 51 27 23 15 10 11 12 29 25 19 20 29 11 23 29 17 10 14 11 8 12 6 11 11 5 10 13 20 22 46 46 29 14 8 29 8 7 9 8 18 11 34 36 14 39 12 18 16 22 33 34 6 29 6 9 16 11 8 6 11 19 8 7 19 25 38 18 17 14 26 26 51 29 7 10 25 51 31 14 6 14 20 34 8 8 13 10 5 11 38 38 38 12 13 14 30 14 14 12 8 24 10 12 7 33 6 15 8 15 30 15 16 20 19 26 33 44 39 44 39 12 9 28 34 22 12 17 5 9 9 13 8 7 42 37 26 17 26 22 19 18 16 13 26 35 7 6 8 14 22 14 17 11 31 18 13 13 33 42 29 10 12 9 29 16 6 10 12 12 8 3 3 8 18 26 7 19 12 9 6 12 30 29 12 17 9 9 5 6 7 24 15 6 11 9 12 10 29 16 11 5 10 11 5 8 6 18 4 3 3 12 6 7 6 8 11 25 16 4 11 16 20 9 17 30 14 5 5 4 5 5 4 3 7 7 15 7 13 7 4 10 7 5 5 5 10 22 10 25 15 5 5 9 9 5 17 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_103589309_103590379
seq2: B6Ng01-130J12.g_69_1135 (reverse)

seq1  AAGCAATATTCTTATGCAATTTATTGTTGATTACATTTAGTCATTTCACA  50
      ||||||| |||||||||||||   |||||| |||||||||||||||||||
seq2  AAGCAAT-TTCTTATGCAATT--ATGTTGA-TACATTTAGTCATTTCACA  46

seq1  AGGAAAATGAGCTGTCAATCATCAGTGATATTTCTTTAAGTTATCATACT  100
      ||||||  |||| ||||||||||||||||||||| ||||| |||||||||
seq2  AGGAAA--GAGCGGTCAATCATCAGTGATATTTCCTTAAGGTATCATACT  94

seq1  TGTAAATGTTCTTAAGCAAGGGTAACTGGTTTTC-AGATTCCCATTTTTT  149
      ||||||||||||| ||||| |||||||||||||| |||||||||||||||
seq2  TGTAAATGTTCTT-AGCAA-GGTAACTGGTTTTCAAGATTCCCATTTTTT  142

seq1  CAGATGGACAATTAAATCTGGC-AAAATATATTCATAAAAT-AAAATGTT  197
      ||||||||||| | |||||||| |||||||| ||||||||| ||||||||
seq2  CAGATGGACAAATTAATCTGGCAAAAATATAATCATAAAATAAAAATGTT  192

seq1  TTCTAATTAATATCTTCTGAGGAAATTG-TAATAAAAGAGAACCTTGTGC  246
      ||||||||||||||||||||| |||||| || |||||||||||| |||||
seq2  TTCTAATTAATATCTTCTGAGAAAATTGTTATTAAAAGAGAACC-TGTGC  241

seq1  TTCAAGGTCATTGTAAAGTTGCTCAATGTCAATGTAC-AAAAGGAGCTGC  295
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTCAAGGTCATTGTAAAGTTGCTCAATGTCAATGTACAAAAAGGAGCTGC  291

seq1  TGACAATGAGTATGCCCTAAATCATCATATATACATATATATATGCATGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATGAGTATGCCCTAAATCATCATATATACATATATATATGCATGT  341

seq1  ATACATACATATATATTATGAGATATATAAATGTGTGTGTGTGTGTGTGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACATATATATTATGAGATATATAAATGTGTGTGTGTGTGTGTGT  391

seq1  GTGTGTGTGTATACGAAGAAAGGAAAGGAAAATTCAAAGGGAAAAATGTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTATACGAAGAAAGGAAAGGAAAATTCAAAGGGAAAAATGTT  441

seq1  AATATTTTCTTTAGAGATTTCAATTTTAAACTAGACAGAGTGTTTTGAAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTCTTTAGAGATTTCAATTTTAAACTAGACAGAGTGTTTTGAAT  491

seq1  CTTTATGCTAATGTGTAGAACTCAGATGTGTGTGTGTGTGTGTGTGTGTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGCTAATGTGTAGAACTCAGATGTGTGTGTGTGTGTGTGTGTGTG  541

seq1  TGTGTGTGTGTGTGTGTGTGTTCCTTGCTTTTGTTTGGAATTTTTTGTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTTCCTTGCTTTTGTTTGGAATTTTTTGTTT  591

seq1  GTTTGGATTTGGGTGTATTTATTTATTTGTCTATTTAGCACTTTAAATGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGATTTGGGTGTATTTATTTATTTGTCTATTTAGCACTTTAAATGC  641

seq1  CATTAGTCATGTATAGGGAAGATACAAGTGATGTCTAGTGTTGTCAACTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTCATGTATAGGGAAGATACAAGTGATGTCTAGTGTTGTCAACTT  691

seq1  GACAGAATCTAGAATTCCCTAGGAGCTATGCCTATGGCTATTCTTTGGGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAATCTAGAATTCCCTAGGAGCTATGCCTATGGCTATTCTTTGGGG  741

seq1  ACGTTATCTCTAGTGTGGTAGTTGGGGTGAGAAAGCCCATCTGAGTGGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTATCTCTAGTGTGGTAGTTGGGGTGAGAAAGCCCATCTGAGTGGAT  791

seq1  GGCACTAATCCCTGGCTAGGATTGTGGACTCTGTATGTTGCAAAGGAAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTAATCCCTGGCTAGGATTGTGGACTCTGTATGTTGCAAAGGAAAA  841

seq1  AGAACAGCCACAGGCTTACACTCATGTCTGTTTCTAGATTGAAGGCAATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGCCACAGGCTTACACTCATGTCTGTTTCTAGATTGAAGGCAATG  891

seq1  TGACCTGGCTCTCGAAGCTCTTGCTGCCTTGATTTCTCAGTCATGATATA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGGCTCTCGAAGCTCTTGCTGCCTTGATTTCTCAGTCATGATATA  941

seq1  GACTGTACTGACCTTTTAAGTTGTCAGAGTATTTTTATCGTCATAGCCAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTACTGACCTTTTAAGTTGTCAGAGTATTTTTATCGTCATAGCCAC  991

seq1  AGCAAAAGAAACTGAGATGAACAGGCTCAGTTACCTCTTAATATCTTTTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGAAACTGAGATGAACAGGCTCAGTTACCTCTTAATATCTTTTG  1041

seq1  GTTTTGCAGTGTTAGCAATTGAATTC  1071
      ||||||||||||||||||||||||||
seq2  GTTTTGCAGTGTTAGCAATTGAATTC  1067

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information