BAC Information

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BAC

Clone NameB6Ng01-130L19
Chromosome6 (Build37)
Map Location 110,316,775 - 110,317,781
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043720
Downstream geneGrm7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130L19.bB6Ng01-130L19.g
ACCDH931974DH931975
length7811,005
definitionDH931974|Mus musculus domesticus DNA, BAC clone: B6Ng01-130L19, 5' end.DH931975|Mus musculus domesticus DNA, BAC clone: B6Ng01-130L19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaacagaggaatctcaaatggctgtgaagcacctaaagaaatg
ttcaaactcctcagtgatcagagaaatgcaaatcaaaacaaccctgagat
tctgccttataccaatcagaatggctaagatcaaaacctcaggtgacagc
acatgttggtgaggatatggaaaaagaggaacactcctccactgctggtg
aaattgcaaaatggtataaccactctggaaatcaggctggagcttcatca
gaaaattagaagtagatctacctgaaaacccagcaataccactcttggga
atatacctcaaagatatctcaccatgccacaggggcacatgtttcactat
gttcatggaggccttatttgtgatagctaggagctggagacaaccctgat
gcccatgacagaagaatggatagagaaaaagtggttcatttacacaatgg
aatactgtactcagctactaagaaccaggacatcctgacttttgcaggca
aatggatagaactatagaatatcatcctgagtgaggtaactcagacacaa
aacgacatgcgtggtatgtacccactaataagtggatattagaaaataaa
acaaacaaaaaacacaaaaacaaaaaacaaacaaacaaacaaaaaaacac
agaatatccaagatatagtccacagaactcaaaatggtcaagctgaagag
cccaaatgagtcagtcccacttgggagggagaagaaagcaaatacaagca
gggagggagggagggaaatgggagggaatgt

gaattctttaaacttgtggggcagtggaacatgccaggaaacttggtaag
attgagtgggttcagaaactccagtacttttagatctgaggataataggc
atttcacctactcttgaccaggtgcctatcatgagacaatggcacctcat
ggaggggaacttgacaatcaatcacataggggcagtgtcgcaaagcccct
ccacatgcagataagtcatccctaacatttcagactaagccaatagaaag
cacctgcttgtagaacccaacacactccaaaatgtagataagaccatgcc
ccaaggaataaaggcatgtgagttaaatcatcaaagatcatctaagagtg
tccgtcaaataagagctgtaatgctttgggagaagaaatttctctcccaa
aactttcacacacccctgggaactgtttgagactaatgaggtcacttcct
caccttggctcagaagccctatgccagactggctctcactagttttgatc
aggagcagagagcatttgccacttcaatgtgactccactctctgtttcag
agagtataacttcttggctactctggccaggccagagacccactgatctc
cacagatagtatccagtacacagactggcctaaactgacagtcaaggata
ccaaatgtggccaagaggttataatttcttctaattgttatttttaaagt
gtgttttttgtttgttttgttttgctttgctttttgtgtttgatactatg
acaaaacaattaagagaaacaacttaaattgagaaagttgggtctcatga
tttttcaagcccatgattccatttctctgttgtttctgggccttatagca
gagaacatgagggagacacagacacttacctaattgtgttcaggagaaga
aagatatggggacatgaataaaaggacattttggaagcttgagccctatg
acttgtttctttaatggagttcgacttctaaatgttccctagaatttcta
tcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_110316775_110317781
seq2: B6Ng01-130L19.g_68_1072 (reverse)

seq1  TCTGATAGAAA-TCTAGGAAACATTTAGAAGTCGAACTCAATTAAAGAAA  49
      ||||||||||| |||||| |||||||||||||||||||| ||||||||||
seq2  TCTGATAGAAATTCTAGGGAACATTTAGAAGTCGAACTCCATTAAAGAAA  50

seq1  CAAGTCATAGGGCTCAAGCTTCCAAAATGTCCTTTTATTCATGTCCCCAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCATAGGGCTCAAGCTTCCAAAATGTCCTTTTATTCATGTCCCCAT  100

seq1  ATCTTTCTTCTTCCTGAACACAATTAGGTAAGTGTCTGTGTTCTCCCTCA  149
      |||||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  ATCTTTCTTC-TCCTGAACACAATTAGGTAAGTGTCTGTG-TCTCCCTCA  148

seq1  TGTTCTCTGCTATAAGGCCCAGAAACAACAGAGAAATGGAATCATGGGCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTGCTATAAGGCCCAGAAACAACAGAGAAATGGAATCATGGGCT  198

seq1  TGAAAAATCATGAGACCCAAACTTTCTCAATTTAAGTTGTTTCTCTTAAT  249
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGAAAAATCATGAGACCC-AACTTTCTCAATTTAAGTTGTTTCTCTTAAT  247

seq1  TGTTTTGTCATAGTATCAAACACAAAAAGCAAAGCAAAACAAAACAAACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTCATAGTATCAAACACAAAAAGCAAAGCAAAACAAAACAAACA  297

seq1  AAAAACACACTTTAAAAATAACAATTAGAAGAAATTATAACCTCTTGGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACACTTTAAAAATAACAATTAGAAGAAATTATAACCTCTTGGCC  347

seq1  ACATTTGGTATCCTTGACTGTCAGTTTAGGCCAGTCTGTGTACTGGATAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGGTATCCTTGACTGTCAGTTTAGGCCAGTCTGTGTACTGGATAC  397

seq1  TATCTGTGGAGATCAGTGGGTCTCTGGCCTGGCCAGAGTAGCCAAGAAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTGGAGATCAGTGGGTCTCTGGCCTGGCCAGAGTAGCCAAGAAGT  447

seq1  TATACTCTCTGAAACAGAGAGTGGAGTCACATTGAAGTGGCAAATGCTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTCTCTGAAACAGAGAGTGGAGTCACATTGAAGTGGCAAATGCTCT  497

seq1  CTGCTCCTGATCAAAACTAGTGAGAGCCAGTCTGGCATAGGGCTTCTGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTGATCAAAACTAGTGAGAGCCAGTCTGGCATAGGGCTTCTGAG  547

seq1  CCAAGGTGAGGAAGTGACCTCATTAGTCTCAAACAGTTCCCAGGGGTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTGAGGAAGTGACCTCATTAGTCTCAAACAGTTCCCAGGGGTGTG  597

seq1  TGAAAGTTTTGGGAGAGAAATTTCTTCTCCCAAAGCATTACAGCTCTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTTTTGGGAGAGAAATTTCTTCTCCCAAAGCATTACAGCTCTTAT  647

seq1  TTGACGGACACTCTTAGATGATCTTTGATGATTTAACTCACATGCCTTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACGGACACTCTTAGATGATCTTTGATGATTTAACTCACATGCCTTTA  697

seq1  TTCCTTGGGGCATGGTCTTATCTACATTTTGGAGTGTGTTGGGTTCTACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGGGGCATGGTCTTATCTACATTTTGGAGTGTGTTGGGTTCTACA  747

seq1  AGCAGGTGCTTTCTATTGGCTTAGTCTGAAATGTTAGGGATGACTTATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTGCTTTCTATTGGCTTAGTCTGAAATGTTAGGGATGACTTATCT  797

seq1  GCATGTGGAGGGGCTTTGCGACACTGCCCCTATGTGATTGATTGTCAAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGGAGGGGCTTTGCGACACTGCCCCTATGTGATTGATTGTCAAGT  847

seq1  TCCCCTCCATGAGGTGCCATTGTCTCATGATAGGCACCTGGTCAAGAGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCATGAGGTGCCATTGTCTCATGATAGGCACCTGGTCAAGAGTA  897

seq1  GGTGAAATGCCTATTATCCTCAGATCTAAAAGTACTGGAGTTTCTGAACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAATGCCTATTATCCTCAGATCTAAAAGTACTGGAGTTTCTGAACC  947

seq1  CACTCAATCTTACCAAGTTTCCTGGCATGTTCCACTGCCCCACAAGTTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAATCTTACCAAGTTTCCTGGCATGTTCCACTGCCCCACAAGTTTA  997

seq1  AAGAATTC  1007
      ||||||||
seq2  AAGAATTC  1005


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