BAC Information

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BAC

Clone NameB6Ng01-130L20
Chromosome6 (Build37)
Map Location 141,754,284 - 141,755,391
singlet/doubletsinglet
Overlap geneSlco1a4
Upstream geneLOC664875, Pde3a, Slco1c1, Slco1b2, EG435927
Downstream geneLOC100042750, EG664913, Slco1a1, EG625716, Slco1a6, Slco1a5, Iapp, BC027061, Recql, Golt1b, B230216G23Rik, Gys2, Ldhb, Kcnj8, Abcc9, 5330439B14Rik, Cmas, Gm766
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130L20.bB6Ng01-130L20.g
ACCDH931976DH931977
length1,099981
definitionDH931976|Mus musculus domesticus DNA, BAC clone: B6Ng01-130L20, 5' end.DH931977|Mus musculus domesticus DNA, BAC clone: B6Ng01-130L20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagttttatagcaaaagtcagtattacaactttcaaattttttc
atttattaattgatttttggtggggcatgcacaattaaaataaaaaggca
tagggcaacttgcaagagtttgttcttttctcctgccatgttgatcccag
ggatcacaacaaccttgtcaggctgaggggcaaacagttctttccattga
accttctagctggtccctcttgaaagcttttactctacggttattattaa
tgttaatagtcatgtgctctatggctcgttaatagaatgaacactgagcc
gtcaaagttctatgaatatgagaattagtcttctcagaatatctgatact
acatctagacaagtgatttttattactttatcagtttactctaccttgtg
gttgaactcagggcctcacatgtattaggcaatcacatatccaccgagat
acagcccatctcgacaaggagcctttaaaaggactagttttctcccattc
ttgattttaaggaagagtttcatgaccagctgtgaattgctagggaaaaa
agttccaatcatttttgctacatgatttttaacaacctgattaaagtttt
caatgatgcaaaagaaatgaccaactgtgtgacaggagtaatgaaagaag
ggactgaaaacaggagatggccactgtggagagtctaaccttggaagtct
tgactagagtaaagcagagagagttagcactcctaagtacataacaacag
atgtagagatctttcacacacagaggataaaacaaattatttcagtgtgg
cttaacaaagttgcctattttgagctctaaatacctccagcatcaaaata
taaatgaaaaacatttaaatagtctttctgcaatagaaaagtttcaagct
tatttgaagatatgtgggaaacatccatttcccttgagttaaagagaaca
tactttttgaaatgaggcagctttaatgttaggtgggggtttgctacaga
agttttcctgggaaatcttaaggtgcttcatcacctttctggaaatgcta
tcagtaatatttttttatcatggagtaaggtattgaggccttaagaata
gaattcatgtgtaattctgataggtctgtctttatatgttacttgacctt
tttcccttactgcttttaatattctttgttttgtgcatttggtgttttga
ttattatgtgatggaaggaatttcttttttggtccagactcttttgagtt
ctgctgtcttcttgtatattcatgggcatctctttctttaggttggggaa
gttttcctctataattttgttgaagatatttactgtccctttaagctgga
aatcttccttctcatctatacttattatccttaggtttgatcttctcatt
gggccctagatttcctggatgtttttggtttaggatctttttgcatttca
tattttctttgattgtcaatgttttctatggtatcttctgaagctgagat
tccctcttctatctcttctattctgttgttgatgcttgcatctatgactc
ctgatctctttcctagattttctatctccatagttgtctccctttgtgat
ttctttaagggagttatttatgccctttttatagtcctccatcatcatca
tgagaagtgactttggatccacatcttgctcttctggtgtaatggtgtat
tcaggatttgctatggtgggagagttgggttctgatgatgccacatatcc
ttgctttctgtggcttctgtttttatgattgcctcccaacatctgattat
ctcaagtgccccctgccctcaatatatctgatttggagtctgtccttcct
gtaatcctgggttgagacagaattcctcagagtccagctttctctgttga
tcctgtgatttcagcatcctgtgatcctgagattctgggtgtgtcagagt
tcttggctgtcaagctcctctgagaccccagatcctgtgtgctcagctcc
tgggatcttggatcctaagatcctagacatgttaagagccataagtggta
cctctctggggaccgtgatgctgtctctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_141754284_141755391
seq2: B6Ng01-130L20.b_48_1146

seq1  GAATTCCAGTTTTATAGCAAAAGTCAGTATTACAACTTTCAAATTTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTTTATAGCAAAAGTCAGTATTACAACTTTCAAATTTTTTC  50

seq1  ATTTATTAATTGATTTTTGGTGGGGCATGCACAATTAAAATAAAAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAATTGATTTTTGGTGGGGCATGCACAATTAAAATAAAAAGGCA  100

seq1  TAGGGCAACTTGCAAGAGTTTGTTCTTTTCTCCTGCCATGTTGATCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCAACTTGCAAGAGTTTGTTCTTTTCTCCTGCCATGTTGATCCCAG  150

seq1  GGATCACAACAACCTTGTCAGGCTGAGGGGCAAACAGTTCTTTCCATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCACAACAACCTTGTCAGGCTGAGGGGCAAACAGTTCTTTCCATTGA  200

seq1  ACCTTCTAGCTGGTCCCTCTTGAAAGCTTTTACTCTACGGTTATTATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTAGCTGGTCCCTCTTGAAAGCTTTTACTCTACGGTTATTATTAA  250

seq1  TGTTAATAGTCATGTGCTCTATGGCTCGTTAATAGAATGAACACTGAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATAGTCATGTGCTCTATGGCTCGTTAATAGAATGAACACTGAGCC  300

seq1  GTCAAAGTTCTATGAATATGAGAATTAGTCTTCTCAGAATATCTGATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGTTCTATGAATATGAGAATTAGTCTTCTCAGAATATCTGATACT  350

seq1  ACATCTAGACAAGTGATTTTTATTACTTTATCAGTTTACTCTACCTTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAGACAAGTGATTTTTATTACTTTATCAGTTTACTCTACCTTGTG  400

seq1  GTTGAACTCAGGGCCTCACATGTATTAGGCAATCACATATCCACCGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAACTCAGGGCCTCACATGTATTAGGCAATCACATATCCACCGAGAT  450

seq1  ACAGCCCATCTCGACAAGGAGCCTTTAAAAGGACTAGTTTTCTCCCATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCATCTCGACAAGGAGCCTTTAAAAGGACTAGTTTTCTCCCATTC  500

seq1  TTGATTTTAAGGAAGAGTTTCATGACCAGCTGTGAATTGCTAGGGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTAAGGAAGAGTTTCATGACCAGCTGTGAATTGCTAGGGAAAAA  550

seq1  AGTTCCAATCATTTTTGCTACATGATTTTTAACAACCTGATTAAAGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAATCATTTTTGCTACATGATTTTTAACAACCTGATTAAAGTTTT  600

seq1  CAATGATGCAAAAGAAATGACCAACTGTGTGACAGGAGTAATGAAAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGCAAAAGAAATGACCAACTGTGTGACAGGAGTAATGAAAGAAG  650

seq1  GGACTGAAAACAGGAGATGGCCACTGTGGAGAGTCTAACCTTGGAAGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAAAACAGGAGATGGCCACTGTGGAGAGTCTAACCTTGGAAGTCT  700

seq1  TGACTAGAGTAAAGCAGAGAGAGTTAGCACTCCTAAGTACATAACAACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGAGTAAAGCAGAGAGAGTTAGCACTCCTAAGTACATAACAACAG  750

seq1  ATGTAGAGATCTTTCACACACAGAGGATAAAACAAATTATTTCAGTGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAGATCTTTCACACACAGAGGATAAAACAAATTATTTCAGTGTGG  800

seq1  CTTAACAAAGTTGCCTATTTTGAGCTCTAAATACCTCCAGCATCAAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAAAGTTGCCTATTTTGAGCTCTAAATACCTCCAGCATCAAAATA  850

seq1  TAAATGAAAAACATTTAAATAGTCTTTCTGCAATAGAAAAGTTTCAAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAAAACATTTAAATAGTCTTTCTGCAATAGAAAAGTTTCAAGCT  900

seq1  TATTTGAAGATATGTGGGAAACATCCATTTCCCTTGAGTTAAAAGAGAAC  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATTTGAAGATATGTGGGAAACATCCATTTCCCTTGAGTT-AAAGAGAAC  949

seq1  ATACTTTTTGAAAATGAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCT  1000
      |||||||||| ||||| |||||||||||||||||  ||||||||||||||
seq2  ATACTTTTTG-AAATG-AGGCAGCTTTAATGTTA--GGTGGGGGTTTGCT  995

seq1  ACAGAAGTTTTCCCTGGGAAAATCTTAA-GTGCTACACCAACCTTCTGGA  1049
      ||||||||||| |||||| ||||||||| ||||| || || | |||||||
seq2  ACAGAAGTTTT-CCTGGG-AAATCTTAAGGTGCTTCATCACCTTTCTGGA  1043

seq1  AATGCTATCAGTAAATATTTTTTATCAT-GAGTAAAGTAATTTTGAAGGC  1098
      ||||||||||||||   ||||||||||| |||||| |||   ||| ||||
seq2  AATGCTATCAGTAATATTTTTTTATCATGGAGTAAGGTA---TTG-AGGC  1089

seq1  CTTAAGAATA  1108
      ||||||||||
seq2  CTTAAGAATA  1099