BAC Information

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BAC

Clone NameB6Ng01-132I02
Chromosome6 (Build37)
Map Location 68,915,871 - 68,916,931
singlet/doubletsinglet
Overlap geneIgk
Upstream geneIgkv1-122, EG667435, EG434025, Igkv9-119, Igkv14-118-2, Igkv14-118-1, EG384405, Igkv11-118, Igkv1-117, EG434026, EG628206, Igkv11-114, Igkv2-113, LOC232047, EG381776, Igkv14-111, Igkv1-110, Igkv2-109, Igkv1-108, Igkv2-107, Igkv11-106, Igkv2-105, LOC384408, Gm1067, Igkv15-103, Igkv15-102, Igkv20-101-2, Igkv15-101-1, Igkv15-101, Igkv14-100, Igkv1-99, Igkv12-98, Igkv15-97, Igkv10-96, Igkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459, Igkv13-85, Igkv13-84, Igkv4-83
Downstream geneIgkv13-82, Gm460, Igkv13-80-1, Igkv4-80, Gm194, EG628498, Igkv4-78, EG667621, Igkv13-76, Igkv4-75, Igkv13-74-1, LOC236047, Igkv13-73-1, EG628516, Gm1499, Igkv13-71-1, Igkv4-71, Gm1502, EG628541, Gm1419, Igkv12-67, Igkv12-66, Igkv4-65, Igkv13-64, EG628571, Igkv13-62-1, EG636752, Igkv13-61-1, Igkv4-61, EG667683, Igkv4-60, Gm1077, Igkv13-57-2, Gm1418, Igkv13-57-1, Gm189, Igkv13-56-1, Igkv4-56, Igkv13-55-1, Gm1524, Igkv13-54-1, Igkv4-54, Gm1420, Igkv4-51, Gm1069, Igkv12-49, Igkv5-48, ENSMUSG00000029975, Igkv12-46, Igkv5-45, Igkv12-44, Igkv5-43, Igkv12-42, Igkv12-41, Igkv5-40-1, Igkv12-40, Gm1409, Igkv12-38, Gm1410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132I02.bB6Ng01-132I02.g
ACCDH933290DH933291
length1,092768
definitionDH933290|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I02, 5' end.DH933291|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctgtcaaggtctataaatattgaatctgtagattagttttgg
taagttggccatttttactatgttaatcctactcaactatgagcatggga
gatatttctatccttggatgtcttcaattcctttttgcagatacctgaag
tcttgtcatgcaattctatcctttgcttggatagagttacaccaaagacc
tttcattgcttgtggttgttgtaaagggtgttctgtaagcttattgtata
ttgagaacccttttttcttaaattagggaaatagtctttttgattttgat
gaagatattttctggacctttaagctgggaatattcttttttttttaacc
tttctttatattattctttggttttgtctttacctgatgtcccagatttc
ctggatctcttgtgatagatatggctacaatttggcatttcctttgaccg
atatatcagtttgttatattgtatcttctacggctgagattctctattcc
attctcttttattctgttggtaattcttttgtacttattttctgttctct
ttcataggcagtggatgtatcatatttcattctcaccactagcagcctgg
agatccaagtcatgatatatattacacagatttgtagctcaatttccatt
taggttccccaacatctggagtgaagacacttccctgaagctataccttg
actcttgtgttccttctccaacaaggctgacttgtctgcctgcagtggga
aagggcatgccaaatccttcagagactggttgcaagaaagtaggatgata
ctcaagtttgcccaccctctcagaggaatagcaagttgtggaggtaggat
tctgtgagaggtgtacttgaagagtggacaatttggggatataaatatag
atagatagatagatagatagatagatgatagatgatagatagacgacgac
gatacttcacatagttgtagcaatgtgagctggattcacagttgcttttc
tcttctcaactgtaacagaatgtctaagttgagccagacatgaagacagt
gaaagttttagccaagagcaagacgactctgcacacaataaa
gaattcaatctctataaacctaaataaccgaattaaaacatgggttacag
agctaaatagaaaagtcacaacagaagactcttgaatggctgagaagcac
ttaaagaaatgttcaaagacattactcatcagagaaatacaaatcaaaac
aactctgagattccacccctcaccaatcagaatggctatgaaacccacgt
tacatcaaaagctggtgaggatctagagaaagagggacacttctccattt
cttataagattgcaaactgctgtaactactttggaaatcaatctggcaat
tcttcagaaaattggatatagttctatctgaagacccaggtataccattc
ttggccatatacccaaaagattccccactaaaacacaaggacatgtgttt
caccaggttctaagaagccttatttgtaataaccagaagctggaaacaaa
acagatgttcctcaaccaactatagatacagaaaattagctatttttata
caatggaatactgttcagctattaaaaatgaggacatcatgaattgtgca
ggcaaatgaatagaactagaaaatattatcttaagtgaggtaacccagat
acaaaaaaccacacatggtatgtacttactgatatgtggatattagacca
cttatacttcctacagatggtaagaagtgtagcaaacagaactgctcaag
tgaggaggtttcaactccactaagagggaaggaaatattcatgtaatgtg
gagggagggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_68915871_68916931
seq2: B6Ng01-132I02.b_104_1137 (reverse)

seq1  TTTATTGTGGTGCAGAGCTCCTGTCTGTGCTCCTTTGGCTAAAACTTTCC  50
      |||||||| |||||||| ||  |||| |||||  |||||||||||||| |
seq2  TTTATTGT-GTGCAGAG-TC--GTCT-TGCTC--TTGGCTAAAACTTT-C  42

seq1  ACTGTCCTTCAATGTCTGGCTTCAACTGAGACATTCTGTGTACAGTTTGA  100
      ||||| |||| ||||||||| |||||| ||||||||||| ||||| ||||
seq2  ACTGT-CTTC-ATGTCTGGC-TCAACTTAGACATTCTGT-TACAG-TTGA  87

seq1  GGAAGGAGGAAAAGCAACTGTGAAATCCAAGCTCCACATTGCTACAACTA  150
       ||||   |||||||||||||| ||||| |||| ||||||||||||||||
seq2  -GAAG--AGAAAAGCAACTGTG-AATCC-AGCT-CACATTGCTACAACTA  131

seq1  TGTGAAGTTTATCTGTCTGTCTGTCTATCTATCTATCTATCTATCTATCT  200
      |||||||  |||| ||| ||| ||||||||||| ||||||| ||||||||
seq2  TGTGAAG--TATC-GTC-GTC-GTCTATCTATC-ATCTATC-ATCTATCT  174

seq1  ATCTATCTATCTATCTATCTATTATTTATATTCCCAAATTGTCCACTCTT  250
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTA-TATTTATATCCCCAAATTGTCCACTCTT  223

seq1  CAAGTACACCTCTCACAGAATCCTACCTCCACAACTTGCTATTCCTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACACCTCTCACAGAATCCTACCTCCACAACTTGCTATTCCTCTGA  273

seq1  GAGGGTGGGCAAACTTGAGTATCATCCTACTTTCTTGCAACCAGTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGGGCAAACTTGAGTATCATCCTACTTTCTTGCAACCAGTCTCTG  323

seq1  AAGGATTTGGCATGCCCTTTCCCACTGCAGGCAGACAAGTCAGCCTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTTGGCATGCCCTTTCCCACTGCAGGCAGACAAGTCAGCCTTGTT  373

seq1  GGAGAAGGAACACAAGAGTCAAGGTATAGCTTCAGGGAAGTGTCTTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGGAACACAAGAGTCAAGGTATAGCTTCAGGGAAGTGTCTTCACT  423

seq1  CCAGATGTTGGGGAACCTAAATGGAAATTGAGCTACAAATCTGTGTAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGTTGGGGAACCTAAATGGAAATTGAGCTACAAATCTGTGTAATA  473

seq1  TATATCATGACTTGGATCTCCAGGCTGCTAGTGGTGAGAATGAAATATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCATGACTTGGATCTCCAGGCTGCTAGTGGTGAGAATGAAATATGA  523

seq1  TACATCCACTGCCTATGAAAGAGAACAGAAAATAAGTACAAAAGAATTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCACTGCCTATGAAAGAGAACAGAAAATAAGTACAAAAGAATTAC  573

seq1  CAACAGAATAAAAGAGAATGGAATAGAGAATCTCAGCCGTAGAAGATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAATAAAAGAGAATGGAATAGAGAATCTCAGCCGTAGAAGATACA  623

seq1  ATATAACAAACTGATATATCGGTCAAAGGAAATGCCAAATTGTAGCCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACAAACTGATATATCGGTCAAAGGAAATGCCAAATTGTAGCCATA  673

seq1  TCTATCACAAGAGATCCAGGAAATCTGGGACATCAGGTAAAGACAAAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCACAAGAGATCCAGGAAATCTGGGACATCAGGTAAAGACAAAACC  723

seq1  AAAGAATAATATAAAGAAAGGTTAAAAAAAAAAGAATATTCCCAGCTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAATATAAAGAAAGGTTAAAAAAAAAAGAATATTCCCAGCTTAA  773

seq1  AGGTCCAGAAAATATCTTCATCAAAATCAAAAAGACTATTTCCCTAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAGAAAATATCTTCATCAAAATCAAAAAGACTATTTCCCTAATTT  823

seq1  AAGAAAAAAGGGTTCTCAATATACAATAAGCTTACAGAACACCCTTTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAAGGGTTCTCAATATACAATAAGCTTACAGAACACCCTTTACA  873

seq1  ACAACCACAAGCAATGAAAGGTCTTTGGTGTAACTCTATCCAAGCAAAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACAAGCAATGAAAGGTCTTTGGTGTAACTCTATCCAAGCAAAGG  923

seq1  ATAGAATTGCATGACAAGACTTCAGGTATCTGCAAAAAGGAATTGAAGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATTGCATGACAAGACTTCAGGTATCTGCAAAAAGGAATTGAAGAC  973

seq1  ATCCAAGGATAGAAATATCTCCCATGCTCATAGTTGAGTAGGATTAACAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGGATAGAAATATCTCCCATGCTCATAGTTGAGTAGGATTAACAT  1023

seq1  AGTAAAAATGG  1061
      |||||||||||
seq2  AGTAAAAATGG  1034