BAC Information

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BAC

Clone NameB6Ng01-132I15
Chromosome6 (Build37)
Map Location 138,926,134 - 139,094,771
singlet/doubletdoublet
Overlap genenone
Upstream gene9830102E05Rik, Mgst1, Lmo3, Igbp1b, EG668196
Downstream geneEG632971, LOC100043898, Pik3c2g, Plcz1, Capza3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132I15.bB6Ng01-132I15.g
ACCDH933316DH933317
length1,189923
definitionDH933316|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I15, 5' end.DH933317|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,093,571 - 139,094,771)(138,926,134 - 138,927,057)
sequence
gaattcccttcaccttgaacgttatatctcaactatagtttggccaccag
ggacacaggaagcaccccctaaccagagatggcactacttgcctcccaga
agaccagctctaacccatgtcacagatctctacctgcctccaaggaggct
ggctctagtcagagacacccaggacagttaacaccagagaaaagcagatg
gtaagagacaagcatcagaacccagttcttccaccacagcaggtcctgga
ttcactaacacacccaaaatacctgaaaaacaagattctgacttaaaagc
tcatgtcctgaagatgatagagatgataggcctttaaagagattatagat
gcctcctttaaagaaatacaggaaaacacaggcaaacagatataagccct
taaagaggaaaaaataaatcccttaaagaaataccggaaaatacaatcaa
gcagatgaaggaattgaacaaaatagtccaagatctaaaaatggaaatag
aaacaataaagaaattaaaaatggtgaaaaccctggagatgggcaactta
ggaaagagatcaggaactatagatgaaagcaccaccaacaaaatacatga
gacagaagagagaatctcgggtgtagaagataccatatgagatatcgaca
tatcagtcaaagaaaatacaaaggataaaaggcttctaacccaaaatata
cagaaaattcaggacaccatgaaaaatatcaaaccaaagattaatatgga
tagaagagggtgaagactcccagctcaaagttctagtttcaaaatatgga
agacatactattttagtttagattgacgacaatgtctggttcttctctag
gttactctcttatggcagaaagcagagttcttgcgcattctgttgttact
tttagacctgccaccaggaaccagagcacaatggccaaggacattagttc
ttttgccaacacgagatctgacaagagtagtctactgaatctttcacgta
gcacagggctaccccgtgcatccttcctcggtagccccagagactcagca
gaccttgtctgatcttgttttatgtcacagttgaaaagaaatatcctgtt
ggatagcttgccttaactacctctactccatatagtttcttgatttctta
aatgataaaacgcccaggaattatttttaggtgtagact
gaattcaccacagaggaatattaaaaggttgagaaacacttaaagaaatg
ttcaaaggccttagtgattagggaaatggaaatcagaataaccctgagac
tccaccttacaacaatcagaatggctaagatcaaaacctcaggtgacagc
acatgttggccgggatgtgcagaaagaggaacactgctccattgcttgtg
ggattgcaaactgatacaatcactctggaaatcaatctggagattcatca
gaaaattggaaatagatctacctcaggagtggtatagctggatcttcagg
taggaaaaacgggaagaagctgaggaacagggtttctaggtatttttaat
tcattcaaatgacattaaaactttcaacaaatgggtaaataatatcttgc
ttgtaatgttgggtgtaaggtttttatctttattttagttgaattcgact
aacatattacaagaaagggtggagataaagtgaaaagaactcaagataaa
taaataaaatacttttaaaaatattatgttcatgagtttctgaatgtttt
aatgaaatcaactcattttgtaatatattttagatttctttaaaagagtt
tatatatctatagtaagatcaattttaatcttaacagtattacttttgaa
catcagaaattagtgtccactacttcaagtaagattcaacatttaaggta
atacttttgtctgtttgtttgttttttgggtttttttgatttttcatttt
gttttttttaaattaggtatttatttttattttacatttccaatgctatc
ccaaaagtctccaaaaccgctccctcaaccactcccccaaccacccactc
ccacttggcgctggcgttccctttactgaggcagacaaggttgcattacc
aatggcctctctttccctgatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_139093571_139094771
seq2: B6Ng01-132I15.b_49_1237 (reverse)

seq1  AGTCTACCTATAAAAATAA-TCCTGTGCTGTTTTATCATTTTAAGGAATA  49
      |||||||   ||||||||| ||||| || ||||||||| |||||| ||| 
seq2  AGTCTACACCTAAAAATAATTCCTGGGC-GTTTTATCA-TTTAAGAAAT-  47

seq1  CAAGAAACTATATGGGAAGTAGAGGTAGTTAAAGCAAGCTATCCAACAGG  99
      |||||||||||||||  ||||||||||||||| |||||||||||||||||
seq2  CAAGAAACTATATGG--AGTAGAGGTAGTTAAGGCAAGCTATCCAACAGG  95

seq1  AATATTTC-TCTCAACTGGTGACATAAAACAAGATTCAGACAGGGTCTTG  148
       ||||||| | |||||| |||||||||||||||| ||||||| |||| ||
seq2  -ATATTTCTTTTCAACT-GTGACATAAAACAAGA-TCAGACAAGGTC-TG  141

seq1  CTGGGGTTCTCTTGGGGCTACCGAGGGAAGGATGCACGGGGTAGCCCTGT  198
      ||| |  |||| |||||||||||| |||||||||||||||||||||||||
seq2  CTGAG--TCTC-TGGGGCTACCGA-GGAAGGATGCACGGGGTAGCCCTGT  187

seq1  GCTACGTGAAAGATTCAGTAGACTACTCTTGTTCAGATCTCGTGTTGGCA  248
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCTACGTGAAAGATTCAGTAGACTACTCTTG-TCAGATCTCGTGTTGGCA  236

seq1  AAAGAACTAATGTCCTTGGCCATTGTGCTCTGGTTCCTGGTGGCAGGTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTAATGTCCTTGGCCATTGTGCTCTGGTTCCTGGTGGCAGGTCT  286

seq1  AAAAGTAACAACAGAATGCGCAAGAACTCTGCTTTCTGCCATAAGAGAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAACAACAGAATGCGCAAGAACTCTGCTTTCTGCCATAAGAGAGT  336

seq1  AACCTAGAGAAGAACCAGACATTGTCGTCAATCTAAACTAAAATAGTATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGAGAAGAACCAGACATTGTCGTCAATCTAAACTAAAATAGTATG  386

seq1  TCTTCCATATTTTGAAACTAGAACTTTGAGCTGGGAGTCTTCACCCTCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATATTTTGAAACTAGAACTTTGAGCTGGGAGTCTTCACCCTCTT  436

seq1  CTATCCATATTAATCTTTGGTTTGATATTTTTCATGGTGTCCTGAATTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCATATTAATCTTTGGTTTGATATTTTTCATGGTGTCCTGAATTTT  486

seq1  CTGTATATTTTGGGTTAGAAGCCTTTTATCCTTTGTATTTTCTTTGACTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATATTTTGGGTTAGAAGCCTTTTATCCTTTGTATTTTCTTTGACTG  536

seq1  ATATGTCGATATCTCATATGGTATCTTCTACACCCGAGATTCTCTCTTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCGATATCTCATATGGTATCTTCTACACCCGAGATTCTCTCTTCT  586

seq1  GTCTCATGTATTTTGTTGGTGGTGCTTTCATCTATAGTTCCTGATCTCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATGTATTTTGTTGGTGGTGCTTTCATCTATAGTTCCTGATCTCTT  636

seq1  TCCTAAGTTGCCCATCTCCAGGGTTTTCACCATTTTTAATTTCTTTATTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGTTGCCCATCTCCAGGGTTTTCACCATTTTTAATTTCTTTATTG  686

seq1  TTTCTATTTCCATTTTTAGATCTTGGACTATTTTGTTCAATTCCTTCATC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTCCATTTTTAGATCTTGGACTATTTTGTTCAATTCCTTCATC  736

seq1  TGCTTGATTGTATTTTCCGGTATTTCTTTAAGGGATTTATTTTTTCCTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGATTGTATTTTCCGGTATTTCTTTAAGGGATTTATTTTTTCCTCT  786

seq1  TTAAGGGCTTATATCTGTTTGCCTGTGTTTTCCTGTATTTCTTTAAAGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGCTTATATCTGTTTGCCTGTGTTTTCCTGTATTTCTTTAAAGGA  836

seq1  GGCATCTATAATCTCTTTAAAGGCCTATCATCTCTATCATCTTCAGGACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTATAATCTCTTTAAAGGCCTATCATCTCTATCATCTTCAGGACA  886

seq1  TGAGCTTTTAAGTCAGAATCTTGTTTTTCAGGTATTTTGGGTGTGTTAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTTTAAGTCAGAATCTTGTTTTTCAGGTATTTTGGGTGTGTTAGT  936

seq1  GAATCCAGGACCTGCTGTGGTGGAAGAACTGGGTTCTGATGCTTGTCTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAGGACCTGCTGTGGTGGAAGAACTGGGTTCTGATGCTTGTCTCT  986

seq1  TACCATCTGCTTTTCTCTGGTGTTAACTGTCCTGGGTGTCTCTGACTAGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCTGCTTTTCTCTGGTGTTAACTGTCCTGGGTGTCTCTGACTAGA  1036

seq1  GCCAGCCTCCTTGGAGGCAGGTAGAGATCTGTGACATGGGTTAGAGCTGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTCCTTGGAGGCAGGTAGAGATCTGTGACATGGGTTAGAGCTGG  1086

seq1  TCTTCTGGGAGGCAAGTAGTGCCATCTCTGGTTAGGGGGTGCTTCCTGTG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGGAGGCAAGTAGTGCCATCTCTGGTTAGGGGGTGCTTCCTGTG  1136

seq1  TCCCTGGTGGCCAAACTATAGTTGAGATATAACGTTCAAGGTGAAGGGAA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGTGGCCAAACTATAGTTGAGATATAACGTTCAAGGTGAAGGGAA  1186

seq1  TTC  1201
      |||
seq2  TTC  1189

seq1: chr6_138926134_138927057
seq2: B6Ng01-132I15.g_66_988

seq1  GAATTCACCACAGAGGAATATTAAAAGGTTGAGAAACACTTAAAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCACAGAGGAATATTAAAAGGTTGAGAAACACTTAAAGAAATG  50

seq1  TTCAAAGGCCTTAGTGATTAGGGAAATGGAAATCAGAATAACCCTGAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGCCTTAGTGATTAGGGAAATGGAAATCAGAATAACCCTGAGAC  100

seq1  TCCACCTTACAACAATCAGAATGGCTAAGATCAAAACCTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTTACAACAATCAGAATGGCTAAGATCAAAACCTCAGGTGACAGC  150

seq1  ACATGTTGGCCGGGATGTGCAGAAAGAGGAACACTGCTCCATTGCTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTGGCCGGGATGTGCAGAAAGAGGAACACTGCTCCATTGCTTGTG  200

seq1  GGATTGCAAACTGATACAATCACTCTGGAAATCAATCTGGAGATTCATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAAACTGATACAATCACTCTGGAAATCAATCTGGAGATTCATCA  250

seq1  GAAAATTGGAAATAGATCTACCTCAGGAGTGGTATAGCTGGATCTTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGGAAATAGATCTACCTCAGGAGTGGTATAGCTGGATCTTCAGG  300

seq1  TAGGAAAAACGGGAAGAAGCTGAGGAACAGGGTTTCTAGGTATTTTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAAACGGGAAGAAGCTGAGGAACAGGGTTTCTAGGTATTTTTAAT  350

seq1  TCATTCAAATGACATTAAAACTTTCAACAAATGGGTAAATAATATCTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAAATGACATTAAAACTTTCAACAAATGGGTAAATAATATCTTGC  400

seq1  TTGTAATGTTGGGTGTAAGGTTTTTATCTTTATTTTAGTTGAATTCGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATGTTGGGTGTAAGGTTTTTATCTTTATTTTAGTTGAATTCGACT  450

seq1  AACATATTACAAGAAAGGGTGGAGATAAAGTGAAAAGAACTCAAGATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTACAAGAAAGGGTGGAGATAAAGTGAAAAGAACTCAAGATAAA  500

seq1  TAAATAAAATACTTTTAAAAATATTATGTTCATGAGTTTCTGAATGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAATACTTTTAAAAATATTATGTTCATGAGTTTCTGAATGTTTT  550

seq1  AATGAAATCAACTCATTTTGTAATATATTTTAGATTTCTTTAAAAGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATCAACTCATTTTGTAATATATTTTAGATTTCTTTAAAAGAGTT  600

seq1  TATATATCTATAGTAAGATCAATTTTAATCTTAACAGTATTAC-TTTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATATATCTATAGTAAGATCAATTTTAATCTTAACAGTATTACTTTTGAA  650

seq1  CATCAGAAATTAGTGTCCACTACTTCAAGTAAGATTCAACATTTAAGGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAAATTAGTGTCCACTACTTCAAGTAAGATTCAACATTTAAGGTA  700

seq1  ATACTTTTGTCTGTTTGTTTGTTTTTTGGGTTTTTTTGATTTTTCATTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTGTCTGTTTGTTTGTTTTTTGGGTTTTTTTGATTTTTCATTTT  750

seq1  GTTTTTTTTTAAATTAGGTATTTATTTT--ATTTACATTTCCAATGCTAT  797
      | ||||||||||||||||||||||||||   |||||||||||||||||||
seq2  G-TTTTTTTTAAATTAGGTATTTATTTTTATTTTACATTTCCAATGCTAT  799

seq1  CCCAAAAGTCTCC-AAACCGCTCCCTCAACCACTCCCCCACCCACCCACT  846
      ||||||||||||| |||||||||||||||||||||||||| |||||||||
seq2  CCCAAAAGTCTCCAAAACCGCTCCCTCAACCACTCCCCCAACCACCCACT  849

seq1  CCCACTTGGCGCTGGCGTTCCCCTGTACTGAGGCAGACAAAGTTTGCAAT  896
      ||||||||||||||||||| |||| ||||||||||||| ||| ||||| |
seq2  CCCACTTGGCGCTGGCGTT-CCCTTTACTGAGGCAGAC-AAGGTTGCATT  897

seq1  ACCAATGGGCCTCTCTTTCCACTGATGG  924
      |||||| ||||||||||||| |||||||
seq2  ACCAAT-GGCCTCTCTTTCC-CTGATGG  923