BAC Information

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BAC

Clone NameB6Ng01-134F02
Chromosome6 (Build37)
Map Location 18,835,448 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134F02.bB6Ng01-134F02.g
ACCDH934645DH934646
length984648
definitionDH934645|Mus musculus domesticus DNA, BAC clone: B6Ng01-134F02, 5' end.DH934646|Mus musculus domesticus DNA, BAC clone: B6Ng01-134F02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccacttagatttgaccttagtacaaggagataagtatggatctattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcctt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaattctttcttcagagatttgaagttttttatcata
cagatcttcacctccttagtagagtcacgccagattttttatatatttgt
gactattgagaaggtgtgtttcctaatttctttc

gaattcctcatgacaaaaggaaatggagggacaaagagtgcagaaattga
aagaaaagccatccacaaactgccccacctagatatccatcccatctgct
gacaacaaatccagacactaatgcagatgccaagaaatgcttactgacag
gagccctgtatagctgtccccggagaggctctgccagagatggaccaata
caaatgcagtctgtatacagccaaacattggattgaatgtggggacagca
ctggggaagttagtacaaggactttaggagctgaaggcattttaaacctt
ataggaagaacaatatcaaccaagcagactgccccaaagctcccagggac
taaaccagcaacaaaagtgtacacacagggtagcctttgctctagctgaa
tgtgtagcagaggattgccttatatggcatcactgcaggggatccccttg
gtcctgtggaggcttgatgacccaggataggggaatattagaccactgag
ggaggaaagggtaggcaggtgtgagaacaccctcatagagccatatggga
gggaggagggagatagggatattgcagaggggaaactagaaaggggggat
aacatttaaactaaataaataaataaaccaatattagaggtggagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-134F02.b_44_565 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||| ||||||||||||||||| |||
seq2  GGTTGTTATCGTGTAGAAGAATGCGAATAGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAAGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| |||||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522


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