BAC Information

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BAC

Clone NameB6Ng01-134I07
Chromosome6 (Build37)14 (Build37)
Map Location 18,835,769 - 18,835,968114,256,631 - 114,257,706
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134I07.bB6Ng01-134I07.g
ACCDH934794DH934795
length9571,072
definitionDH934794|Mus musculus domesticus DNA, BAC clone: B6Ng01-134I07, 5' end.DH934795|Mus musculus domesticus DNA, BAC clone: B6Ng01-134I07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,769 - 18,835,968)(114,256,631 - 114,257,706)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttactgacggtgtcttttgccttgcagaaaatttggaatttca
catattaaagcaatcatccatcctgaccaagtaggttttattccagggat
gcagggatggtttaatatacgaaaatccatcaatgtaatccattatataa
acaaactcaaagacaaaaaccacatgatcatctcgatagatgcagaaaaa
gcatttgacaagatccaacacccattcatgataaaagttttggaaagatc
aggaattcaaggcccatacctaaacatgataaaagcaatctacagcaaac
cagtaaccaacatcaaagtaaatggagagaagctggaagcaataccacta
aaatcagggactagacaaggctgcccactttctccctaccttttcaacat
agtacttgaagtattagccagagcaattcgacaacaaaaggagatcaagg
ggatacaaattggaaaagaggaagtcaaaatatcactttttgcagatgat
atgatagtatatataagtgaccctaaaaattctaccagagaactcctaaa
cctgataaacagcttctgtgaagtagctggatataaaattaactcaaaca
agtcaatggcctttctctatacaaagaataaacaggctgagaaagaaatt
agggaaacaacacctttctcaatagtcacaaataatataaaatatcttgg
catgactctaactaagaagtgaaagatctgtatgataagaacttcaagtc
tctgaagaaagaaattaaagagatctcagaagatggaaagatctctcatg
ctcatgg
gaattctgaaaaggataggcaatacacagccaggaagttaaacagctaat
gcatgatgggtaagctccaaggaactaggaacagggaaaacatttaaaat
ataatccacactaagcatgagttttaggaaggctgtccttaaggacacac
atcatagataaatcttcttgcattggcatatgtgagggtgacatttatga
acatgatgaaaaagttccccatattctggagggaaaggattaaaagaaac
gaaataataatataaagtctttaaatagtgctttacaaatctaaatatat
agacctagtgtatcaataggaacagtgaagggtagaagtgatgtaaatag
aaactgtggtcatcttatatgctcaggtctgaatttgctgcaatatatat
atatatatatatatatatatatatatatatatgcacacatatacaggaag
tagtgagtagctgttcagtattaagtgcttttaaaatgtatttggaataa
cagtcacaatgttgcctgaaattctaaaagtaaaatgcacatagggcttg
gaagagtcacataaggatatccctgcacactcatctttaaattgcgtatg
cagctctctgagctctgcatagagaagaaattgtctccggcttaaaccac
ctgaggatgcaattcaccatgtgtgagtgggtctgtgcccacgggaggtc
tcaggagacactgctttgtgtatgaagtttatgaattgcttttcttacct
cctgtagtcttgcaaggggatgccttctacagaagacatattaagtagtc
tccaagttccctaagtaatttttaaagtaaaatgaataaagtcaaatata
acctttaaaagatttgaacatgaatttttcattctatttagttacttaag
ccattaactataataggaagcatgctttaagtgagttttatttgttagtc
tgttatttgatcaccagggattgaaatataaatttatttttatttaagtt
ttaggaatatagaactttgagcttttattctagaagtatttaaggttatt
acatgaatgcttattaagggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835769_18835968
seq2: B6Ng01-134I07.b_45_244 (reverse)

seq1  TGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAA  50
      ||||| |||||| |||||||||||||||||||||||||| ||||||||||
seq2  TGAAATTCCAAATTTTCTGCAAGGCAAAAGACACCGTCAGTAAGACAAAA  50

seq1  AGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAG  100

seq1  GGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAA  150

seq1  AATCAAATAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTC  200
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  200

seq1: chr14_114256631_114257706
seq2: B6Ng01-134I07.g_67_1138

seq1  GAATTCTGAAAAGGATAGGCAATACACAGCCAGGAAGTTAAACAGCTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAAAGGATAGGCAATACACAGCCAGGAAGTTAAACAGCTAAT  50

seq1  GCATGATGGGTAAGCTCCAAGGAACTAGGAACAGGGAAAACATTTAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATGGGTAAGCTCCAAGGAACTAGGAACAGGGAAAACATTTAAAAT  100

seq1  ATAATCCACACTAAGCATGAGTTTTAGGAAGGCTGTCCTTAAGGACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCACACTAAGCATGAGTTTTAGGAAGGCTGTCCTTAAGGACACAC  150

seq1  ATCATAGATAAATCTTCTTGCATTGGCATATGTGAGGGTGACATTTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGATAAATCTTCTTGCATTGGCATATGTGAGGGTGACATTTATGA  200

seq1  ACATGATGAAAAAGTTCCCCATATTCTGGAGGGAAAGGATTAAAAGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATGAAAAAGTTCCCCATATTCTGGAGGGAAAGGATTAAAAGAAAC  250

seq1  GAAATAATAATATAAAGTCTTTAAATAGTGCTTTACAAATCTAAATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATAATATAAAGTCTTTAAATAGTGCTTTACAAATCTAAATATAT  300

seq1  AGACCTAGTGTATCAATAGGAACAGTGAAGGGTAGAAGTGATGTAAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTAGTGTATCAATAGGAACAGTGAAGGGTAGAAGTGATGTAAATAG  350

seq1  AAACTGTGGTCATCTTATATGCTCAGGTCTGAATTTGCTGCAATATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGGTCATCTTATATGCTCAGGTCTGAATTTGCTGCAATATATAT  400

seq1  ATATATATATATATATATATATATATATATATGCACACATATACAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATGCACACATATACAGGAAG  450

seq1  TAGTGAGTAGCTGTTCAGTATTAAGTGCTTTTAAAATGTATTTGGAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGTAGCTGTTCAGTATTAAGTGCTTTTAAAATGTATTTGGAATAA  500

seq1  CAGTCACAATGTTGCCTGAAATTCTAAAAGTAAAATGCACATAGGGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACAATGTTGCCTGAAATTCTAAAAGTAAAATGCACATAGGGCTTG  550

seq1  GAAGAGTCACATAAGGATATCCCTGCACACTCATCTTTAAATTGCGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTCACATAAGGATATCCCTGCACACTCATCTTTAAATTGCGTATG  600

seq1  CAGCTCTCTGAGCTCTGCATAGAGAAGAAATTGTCTCCGGCTTAAACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTCTGAGCTCTGCATAGAGAAGAAATTGTCTCCGGCTTAAACCAC  650

seq1  CTGAGGATGCAATTCACCATGTGTGAGTGGGTCTGTGCCCACGGGAGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGATGCAATTCACCATGTGTGAGTGGGTCTGTGCCCACGGGAGGTC  700

seq1  TCAGGAGACACTGC-TTGTGTATGAAGTTTATGAATTGCTTTTCTTACCT  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCAGGAGACACTGCTTTGTGTATGAAGTTTATGAATTGCTTTTCTTACCT  750

seq1  CCTGTAGTCTTGCAAGGGGATGCCTTCTACAGAAGACATATTAAGTAGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGTCTTGCAAGGGGATGCCTTCTACAGAAGACATATTAAGTAGTC  800

seq1  TCCAAGTTCCCTAAGTAATTTTTAAAAGTAAAATGAATAAAGTCAAATAT  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCCAAGTTCCCTAAGTAATTTTT-AAAGTAAAATGAATAAAGTCAAATAT  849

seq1  AACCTTTAAAAGATTTGAACATGAATTTTTCATTCTATTTAGTTACTTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTAAAAGATTTGAACATGAATTTTTCATTCTATTTAGTTACTTAA  899

seq1  GCCATTAACTATTAATAAGAAAGCATGCTTTAAGTGAGTTTTATTTGTTA  949
      ||||||||||| |||| || ||||||||||||||||||||||||||||||
seq2  GCCATTAACTA-TAAT-AGGAAGCATGCTTTAAGTGAGTTTTATTTGTTA  947

seq1  GTCTGTATATTTGATCA-CAGGGATTAGAAATATAAATTTATTTTTATTA  998
      |||||| |||||||||| |||||||| |||||||||||||||||||||| 
seq2  GTCTGT-TATTTGATCACCAGGGATT-GAAATATAAATTTATTTTTATTT  995

seq1  AAGTTTTAGGAATATAGAAATTTGAGCTTTAATTCATAGAAGTATTTAAG  1048
      ||||||||||||||||||| |||||||||| |||| ||||||||||||||
seq2  AAGTTTTAGGAATATAGAACTTTGAGCTTTTATTC-TAGAAGTATTTAAG  1044

seq1  TTTATTACATGAATGCTTATTAGGGGAA  1076
       ||||||||||||||||||||| |||||
seq2  GTTATTACATGAATGCTTATTAAGGGAA  1072