BAC Information

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BAC

Clone NameB6Ng01-134K06
Chromosome6 (Build37)
Map Location 84,608,419 - 84,755,306
singlet/doubletdoublet
Overlap geneExoc6b
Upstream geneCd207, Vax2os2, Vax2os1, Vax2, Atp6v1b1, 1700124L16Rik, Ankrd53, Tex261, LOC665004, Nagk, Paip2b, LOC384450, LOC622683, LOC380687, LOC665098, LOC676366, Zfml, Dysf, LOC665114, 4930504D19Rik, Cyp26b1
Downstream geneLOC665129, Npm3-ps1, EG545861, EG623016, Spr, LOC665086, LOC665089, Emx1, Sfxn5, Rab11fip5, Noto, Smyd5, 1700040I03Rik, Cct7, Fbxo41, Egr4, Alms1, LOC100043497, EG665134, LOC100043493, Cml3, LOC623273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134K06.bB6Ng01-134K06.g
ACCDH934888DH934889
length1,1331,007
definitionDH934888|Mus musculus domesticus DNA, BAC clone: B6Ng01-134K06, 5' end.DH934889|Mus musculus domesticus DNA, BAC clone: B6Ng01-134K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,754,165 - 84,755,306)(84,608,419 - 84,609,421)
sequence
gaattcagaagttatgtcacgcttgcttgttacctagaaccctgttccca
cagctgtgtgaaccatctttgtctgcaaatgtttgttacatctgtctcag
ttcttattagcagaaagggttctgaactcttcttcaggttcctttagttt
ctttaggatgctgttttattttctccagccattttatgttccctgttagt
tttactggttatacttctgtagacaatgtttttctttcttgttactttta
tgtctttatatttctttctcatattctggataattctccagcactctctc
cctcttagcccgctctattgtatctgatccattggaatgctttattttct
ttattgtttatttggggtttttttttgtttgtttgtttcttttgttttta
atgtaagtgctcactctgaagcccaggccagcctggagcttctttgtagc
ccagacttttttcaaacctatactggtcttcctgtctcggccttggggta
gcttgaaccagcatcccagtgctgtcaccatttattttcagtatcagcaa
caatatctggaagctgccgtcttccttgccgtggtttattatttcactat
gatgtatgtatcttttatgttaccatataaacatgtatttattgtccctt
taaaaatgtttctttttaatctcaggtttctgtactccttattttctttg
caaagatatttttcccctcctaagcagttgtttatttaagcagatttaat
ttttgattttttgctgatctttaatgggagcaacctcacacccaatgtaa
actcccacttctcagatgaagcatcaccacagatactttaccctcagtgt
tggttctgtcccggtgtctcaccagtctaggaccagtctgtactcagagt
gtagcttagggattcctgtactgtatagccatcatgattccaacaccaaa
ctgatacttgcaatcaatttcctcttagtaagccaattttcctctaccac
cagctgtatgtaggaggacaagatccatggtcacctgtggtctgatcacc
tttcaggaaaacacagcttgtcaggctcctatttctaggcctaagactga
taaatgttaatggctatgcagcggttgacaatt
gaattcagctgataaattatttgcttgacctgagttcagtcttcagagtt
gctctttaaaaagcagggtttagcatgtgacatgtgcttgtaattctagt
gctggaagagactggctggtcttggggatcagctggctagccaatttagc
ctgcttggtcagttacagaccactaaaagatactgtcttaaagggctggg
gacttaactcagcagttgagaacttgctttgtgtgtgaaaggctgaattt
catttccagcaccaccacaaaaaacaaaccaaccaaccaacaaacaaaca
acaaccactacaacaaaaacagtaagaaaaactctgggctcagtggcctg
taatgtcagtgtttgagaggtagaagcaggaagatcaggagttcaaaggt
atccttggctacataaaattacaagctatctcaactatattaatgtttac
tgactattatatatgtcagatagtgggttattctttgactttaaaagtca
ttttcagattgcttttggcaagatagccatttttactatattgatcctgc
caatccatgagcatgggagatctttccatcttctgagatcttctttgatt
tctttcttcagagacttgaagttcttatcatacagatctttcacttcctt
agagtcacaccaaggtattttatattatttgtgactattgagaagggtgt
tgtttccctaatttctttctcagcctgtttattctttgtgtagagaaagg
ccattgacttgtttgagttaattttatatccagctacttcactgaagctg
tttatcaggtttaggagttctctggtggaatttttagggtcacttatata
tactatcatatcatctgcaaaaagtgatattttgacttcttccttccaat
ttgtatccccttgatctcctttgtgtctaatgctctggctaggacttcag
tactatatgaataggtaggagaaagtgggcagcctgtctagtccctgatt
tagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_84754165_84755306
seq2: B6Ng01-134K06.b_48_1180 (reverse)

seq1  AATTGTCTAACAGCTGCATAGCAAATTTTAACATTAATACAGTTCTAGGG  50
      ||||||| ||| |||||||||| |   |||||||| || ||| |||  ||
seq2  AATTGTC-AACCGCTGCATAGCCA---TTAACATTTAT-CAG-TCTTAGG  44

seq1  CCTAGATAATAAGGAGCCTGACAAGCTGTGTTTTCACTGAAAGGTGATCA  100
      |||||| ||| |||||||||||||||||||||||| ||||||||||||||
seq2  CCTAGA-AAT-AGGAGCCTGACAAGCTGTGTTTTC-CTGAAAGGTGATCA  91

seq1  GGACACAGGTGA-CATGGATCTTTGTCTCCTACATACAGCTGGTGGTAGA  149
      |  ||||||||| ||||||||||   ||||||||||||||||||||||||
seq2  GACCACAGGTGACCATGGATCTTGTCCTCCTACATACAGCTGGTGGTAGA  141

seq1  GGAAAATTGGCTTACTAAGAGGAAATTGATTGCAAGTATCAGTTTGGTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATTGGCTTACTAAGAGGAAATTGATTGCAAGTATCAGTTTGGTGT  191

seq1  TGGAATTCATGATGGCTATACAGTACAGGAATCCCTAAGCTACACTCTGA  249
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAA-TCATGATGGCTATACAGTACAGGAATCCCTAAGCTACACTCTGA  240

seq1  GTACAGACTGGTCCTAGACTGGTGAGACACCGGGACAGAACCAACACTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGACTGGTCCTAGACTGGTGAGACACCGGGACAGAACCAACACTGA  290

seq1  GGGTAAAGTATCTGTGGTGATGCTTCATCTGAGAAGTGGGAGTTTACATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAGTATCTGTGGTGATGCTTCATCTGAGAAGTGGGAGTTTACATT  340

seq1  GGGTGTGAGGTTGCTCCCATTAAAGATCAGCAAAAAATCAAAAATTAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGAGGTTGCTCCCATTAAAGATCAGCAAAAAATCAAAAATTAAAT  390

seq1  CTGCTTAAATAAACAACTGCTTAGGAGGGGAAAAATATCTTTGCAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAAATAAACAACTGCTTAGGAGGGGAAAAATATCTTTGCAAAGAA  440

seq1  AATAAGGAGTACAGAAACCTGAGATTAAAAAGAAACATTTTTAAAGGGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGAGTACAGAAACCTGAGATTAAAAAGAAACATTTTTAAAGGGAC  490

seq1  AATAAATACATGTTTATATGGTAACATAAAAGATACATACATCATAGTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATACATGTTTATATGGTAACATAAAAGATACATACATCATAGTGA  540

seq1  AATAATAAACCACGGCAAGGAAGACGGCAGCTTCCAGATATTGTTGCTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAACCACGGCAAGGAAGACGGCAGCTTCCAGATATTGTTGCTGA  590

seq1  TACTGAAAATAAATGGTGACAGCACTGGGATGCTGGTTCAAGCTACCCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAAATAAATGGTGACAGCACTGGGATGCTGGTTCAAGCTACCCCA  640

seq1  AGGCCGAGACAGGAAGACCAGTATAGGTTTGAAAAAAGTCTGGGCTACAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCGAGACAGGAAGACCAGTATAGGTTTGAAAAAAGTCTGGGCTACAA  690

seq1  AGAAGCTCCAGGCTGGCCTGGGCTTCAGAGTGAGCACTTACATTAAAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTCCAGGCTGGCCTGGGCTTCAGAGTGAGCACTTACATTAAAAAC  740

seq1  AAAAGAAACAAACAAACAAAAAAAAACCCCAAATAAACAATAAAGAAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAACAAACAAACAAAAAAAAACCCCAAATAAACAATAAAGAAAAT  790

seq1  AAAGCATTCCAATGGATCAGATACAATAGAGCGGGCTAAGAGGGAGAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTCCAATGGATCAGATACAATAGAGCGGGCTAAGAGGGAGAGAG  840

seq1  TGCTGGAGAATTATCCAGAATATGAGAAAGAAATATAAAGACATAAAAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGAATTATCCAGAATATGAGAAAGAAATATAAAGACATAAAAGT  890

seq1  AACAAGAAAGAAAAACATTGTCTACAGAAGTATAACCAGTAAAACTAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAAAGAAAAACATTGTCTACAGAAGTATAACCAGTAAAACTAACA  940

seq1  GGGAACATAAAATGGCTGGAGAAAATAAAACAGCATCCTAAAGAAACTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACATAAAATGGCTGGAGAAAATAAAACAGCATCCTAAAGAAACTAA  990

seq1  AGGAACCTGAAGAAGAGTTCAGAACCCTTTCTGCTAATAAGAACTGAGAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCTGAAGAAGAGTTCAGAACCCTTTCTGCTAATAAGAACTGAGAC  1040

seq1  AGATGTAACAAACATTTGCAGACAAAGATGGTTCACACAGCTGTGGGAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAACAAACATTTGCAGACAAAGATGGTTCACACAGCTGTGGGAAC  1090

seq1  AGGGTTCTAGGTAACAAGCAAGCGTGACATAACTTCTGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTCTAGGTAACAAGCAAGCGTGACATAACTTCTGAATTC  1133

seq1: chr6_84608419_84609421
seq2: B6Ng01-134K06.g_67_1061

seq1  GAATTCAGCTGATAAATTATTTGCTTGACCTGAGTTCAGTCTTCAGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGATAAATTATTTGCTTGACCTGAGTTCAGTCTTCAGAGTT  50

seq1  GCTCTTTAAAAAGCAGGGTTTAGCATGTGACATGTGCTTGTAATTCTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTAAAAAGCAGGGTTTAGCATGTGACATGTGCTTGTAATTCTAGT  100

seq1  GCTGGAAGAGACTGGCTGGTCTTGGGGATCAGCTGGCTAGCCAATTTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAGAGACTGGCTGGTCTTGGGGATCAGCTGGCTAGCCAATTTAGC  150

seq1  CTGCTTGGTCAGTTACAGACCACTAAAAGATACTGTCTTAAAGGGCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGGTCAGTTACAGACCACTAAAAGATACTGTCTTAAAGGGCTGGG  200

seq1  GACTTAACTCAGCAGTTGAGAACTTGCTTTGTGTGTGAAAGGCTGAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAACTCAGCAGTTGAGAACTTGCTTTGTGTGTGAAAGGCTGAATTT  250

seq1  CATTTCCAGCACCACCACAAAAAACAAACCAACCAACCAACAAACAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCAGCACCACCACAAAAAACAAACCAACCAACCAACAAACAAACA  300

seq1  ACAACCACTACAACAAAAACAGTAAGAAAAACTCTGGGCTCAGTGGCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACTACAACAAAAACAGTAAGAAAAACTCTGGGCTCAGTGGCCTG  350

seq1  TAATGTCAGTGTTTGAGAGGTAGAAGCAGGAAGATCAGGAGTTCAAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCAGTGTTTGAGAGGTAGAAGCAGGAAGATCAGGAGTTCAAAGGT  400

seq1  ATCCTTGGCTACATAAAATTACAAGCTATCTCAACTATATTAATGTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGGCTACATAAAATTACAAGCTATCTCAACTATATTAATGTTTAC  450

seq1  TGACTATTATATATGTCAGATAGTGGGTTATTCTTTGACTTTAAAAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATTATATATGTCAGATAGTGGGTTATTCTTTGACTTTAAAAGTCA  500

seq1  TTTTCAGATTGCTTTTGGCAAGATAGCCATTTTTACTATATTGATCCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGATTGCTTTTGGCAAGATAGCCATTTTTACTATATTGATCCTGC  550

seq1  CAATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTGATT  600

seq1  TCTTTCTTCAGAGACTTGAAGTTCTTATCATACAGATCTTTCACTTCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTCAGAGACTTGAAGTTCTTATCATACAGATCTTTCACTTCCTT  650

seq1  AGAGTCACACCAAGGTATTTTATATTATTTGTGACTATTGAGAAGGGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCACACCAAGGTATTTTATATTATTTGTGACTATTGAGAAGGGTGT  700

seq1  TGTTTCCCTAATTTCTTTCTCAGCCTGTTTATTCTTTGTGTAGAGAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCCTAATTTCTTTCTCAGCCTGTTTATTCTTTGTGTAGAGAAAGG  750

seq1  CCATTGACTTGTTTGAGTTAATTTTATATCCAGCTACTTCACTGAAGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGACTTGTTTGAGTTAATTTTATATCCAGCTACTTCACTGAAGCTG  800

seq1  TTTATCAGGTTTAGGAGTTCTCTGGTGGAATTTTTAGGGTCACTTATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGGTTTAGGAGTTCTCTGGTGGAATTTTTAGGGTCACTTATATA  850

seq1  TACTATCATATCATCTGCAAAAAGTGATATTTTGACTTCTTCCTTTCCAA  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TACTATCATATCATCTGCAAAAAGTGATATTTTGACTTCTTCC-TTCCAA  899

seq1  TTTGTATCCCCTTGATCTCCTTTTGTTGTCTAATTGCTCTGGCTAGGACT  950
      |||||||||||||||||||||||   ||||||| ||||||||||||||||
seq2  TTTGTATCCCCTTGATCTCCTTT--GTGTCTAA-TGCTCTGGCTAGGACT  946

seq1  TCAAGTACTATATTGAATAGGTAGGGAGAAAGTGGGCAGCCTTGTCTAGT  1000
      || ||||||||| |||||||||| ||||||||||||||||| ||||||||
seq2  TC-AGTACTATA-TGAATAGGTA-GGAGAAAGTGGGCAGCC-TGTCTAGT  992

seq1  CCC  1003
      |||
seq2  CCC  995