BAC Information

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BAC

Clone NameB6Ng01-135F20
Chromosome6 (Build37)
Map Location 138,623,839 - 138,624,998
singlet/doubletsinglet
Overlap genenone
Upstream geneStrap, Dera, 9830102E05Rik, Mgst1, Lmo3, Igbp1b
Downstream geneEG668196, EG632971, LOC100043898
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135F20.bB6Ng01-135F20.g
ACCDH935420DH935421
length1,145591
definitionDH935420|Mus musculus domesticus DNA, BAC clone: B6Ng01-135F20, 5' end.DH935421|Mus musculus domesticus DNA, BAC clone: B6Ng01-135F20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgggctactttctcacaagccctaaatattattttaattttt
aattttcatagatcatatagatctactctcattaatttttgcatacatta
agctgatttattttaaagaattagaatacatttgaaatcatagtcactag
cttcttaatacttaaagtcttgcacactagaaattatttaacctatagca
taataaacagtatacaaaccttcttgctacacagcactcttccttattat
atttttctataggcacaaccttggcctatagaaacccatgtcaagggaaa
aaatacgaaaaaaaaaatacagttaactctctaaaatacacaactatata
ctgattgttagtttggccaggagggtgacatttaaaaagtctggctactg
cagagttattaagaattggtgtgtgttaccattttgcaaaacatcctcat
gtcaatcacaaaaccaaccagaatattcttagctcagttttcacatagga
ttgaactacaagggactcgtctaaatacctgagaagtcttcactgtgtgt
attgaagaaagactggcatcgttgcaattttttttaaagggtagcttttg
taggattaaacagcagctagaaagctttgatgtgccagtctcatagaaga
tgcctacagtttgttataaaaatgttcccttttatattttacagacaatt
acattgaaatcatcttgcagttcattgtgtgtacgtaagtagacatatac
tagcaactatttagtcattgataaatctgagattaggctcacatttctag
atggctaatgaaattaggttagtggtcttttgtctttgttgttttatttt
aaacaagggtttaggcaatgtaagatgtgttaaatatattaaccccacgg
aggctcttgctttatcaaatggattcctccctttcaccccacccttcttc
ccgttcatccctactgactctctttacttctttcttcccttatctcctca
ctctgttccctgcatgaagtgcaacactttgaaaaatacttgtgtatctt
atctcatctttctttctcgaagccctttttcattacatttgactagttca
tgggatcgttatttgtcaaagaagtctcaatatatctgacaatat

gaattctcaaaagaggagactcaaatggctgagaaacactcccacccatc
tcaaaaaaatttaacccacaattgtctcagtctaaaggaaatgcaagaac
aaagagagtggagcagacaccaaaggaacggccatccagagactggggat
taattccatctgaagataccaaaccccaacaccatttattgctgatgcca
agaggtacttgctgacaggagcctgatatggctgtcccttgagactctct
ggcaggacctgactaatacagatacggatgctggcagccaaccatcagac
tgagcaggggaaccccaatagaagagttaggggaaggattgaaggagcta
aaggggattgcaaccccataggaagaacaacaaatcaagtaactgtaccc
ctcagagcttctagggactaaactaccaaccaaagagtccacagagagag
acccatggctccagctccttatgtagcaaagggatgccttatctggcatc
aatggaaggggaggcccttggttctatggaggctcaatgccccagacttg
gaggatgctagggtggtgaggtggaagtgagtaggtggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_138623839_138624998
seq2: B6Ng01-135F20.b_45_1189 (reverse)

seq1  ATATAGTCAGGTATATTGAGACTTCTGTGACAAATAACGATCCCCATGAA  50
      |||| ||||| ||||||||||||||| |||||||||||||| ||||||||
seq2  ATATTGTCAGATATATTGAGACTTCTTTGACAAATAACGAT-CCCATGAA  49

seq1  ACTTAGTCAAAATGTAATAGAAAAGAGCTTCGAGAAAGAAAAGATAGAAG  100
         ||||| |||||||||  ||||| |||||||||||| ||||||   ||
seq2  --CTAGTC-AAATGTAATGAAAAAGGGCTTCGAGAAAG-AAAGAT--GAG  93

seq1  ATAAGATAACAACAAGGTATGTTTCAAAGTGTTGCACTTCAATGCAGGGG  150
      ||||||||   |||| |||| ||||||||||||||||||| ||||| |||
seq2  ATAAGATA--CACAA-GTATTTTTCAAAGTGTTGCACTTC-ATGCA-GGG  138

seq1  AACAGAGTGAGGGAGATAAGGGAAGAAAGAAGTAAAGAGAGTCAGTAGGG  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGTGA-GGAGATAAGGGAAGAAAGAAGTAAAGAGAGTCAGTAGGG  187

seq1  ATGGAACGGGAAGAAGGGTGGGGTGAAAGGGGAGGAATCCATTTGATAAA  250
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AT-GAACGGGAAGAAGGGTGGGGTGAAA-GGGAGGAATCCATTTGATAAA  235

seq1  GCAAGAGCCTCCGTGGGGTTAATATATTTAACACATCTTACATTGCCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGCCTCCGTGGGGTTAATATATTTAACACATCTTACATTGCCTAA  285

seq1  ACCCTTGTTTAAAATAAAACAACAAAGACAAAAGACCACTAACCTAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGTTTAAAATAAAACAACAAAGACAAAAGACCACTAACCTAATTT  335

seq1  CATTAGCCATCTAGAAATGTGAGCCTAATCTCAGATTTATCAATGACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCCATCTAGAAATGTGAGCCTAATCTCAGATTTATCAATGACTAA  385

seq1  ATAGTTGCTAGTATATGTCTACTTACGTACACACAATGAACTGCAAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGCTAGTATATGTCTACTTACGTACACACAATGAACTGCAAGATG  435

seq1  ATTTCAATGTAATTGTCTGTAAAATATAAAAGGGAACATTTTTATAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATGTAATTGTCTGTAAAATATAAAAGGGAACATTTTTATAACAA  485

seq1  ACTGTAGGCATCTTCTATGAGACTGGCACATCAAAGCTTTCTAGCTGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGGCATCTTCTATGAGACTGGCACATCAAAGCTTTCTAGCTGCTG  535

seq1  TTTAATCCTACAAAAGCTACCCTTTAAAAAAAATTGCAACGATGCCAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCTACAAAAGCTACCCTTTAAAAAAAATTGCAACGATGCCAGTC  585

seq1  TTTCTTCAATACACACAGTGAAGACTTCTCAGGTATTTAGACGAGTCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCAATACACACAGTGAAGACTTCTCAGGTATTTAGACGAGTCCCT  635

seq1  TGTAGTTCAATCCTATGTGAAAACTGAGCTAAGAATATTCTGGTTGGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCAATCCTATGTGAAAACTGAGCTAAGAATATTCTGGTTGGTTT  685

seq1  TGTGATTGACATGAGGATGTTTTGCAAAATGGTAACACACACCAATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGACATGAGGATGTTTTGCAAAATGGTAACACACACCAATTCTT  735

seq1  AATAACTCTGCAGTAGCCAGACTTTTTAAATGTCACCCTCCTGGCCAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTCTGCAGTAGCCAGACTTTTTAAATGTCACCCTCCTGGCCAAAC  785

seq1  TAACAATCAGTATATAGTTGTGTATTTTAGAGAGTTAACTGTATTTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATCAGTATATAGTTGTGTATTTTAGAGAGTTAACTGTATTTTTTT  835

seq1  TTTCGTATTTTTTCCCTTGACATGGGTTTCTATAGGCCAAGGTTGTGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTATTTTTTCCCTTGACATGGGTTTCTATAGGCCAAGGTTGTGCCT  885

seq1  ATAGAAAAATATAATAAGGAAGAGTGCTGTGTAGCAAGAAGGTTTGTATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAATATAATAAGGAAGAGTGCTGTGTAGCAAGAAGGTTTGTATA  935

seq1  CTGTTTATTATGCTATAGGTTAAATAATTTCTAGTGTGCAAGACTTTAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTATTATGCTATAGGTTAAATAATTTCTAGTGTGCAAGACTTTAAG  985

seq1  TATTAAGAAGCTAGTGACTATGATTTCAAATGTATTCTAATTCTTTAAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGAAGCTAGTGACTATGATTTCAAATGTATTCTAATTCTTTAAAA  1035

seq1  TAAATCAGCTTAATGTATGCAAAAATTAATGAGAGTAGATCTATATGATC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAGCTTAATGTATGCAAAAATTAATGAGAGTAGATCTATATGATC  1085

seq1  TATGAAAATTAAAAATTAAAATAATATTTAGGGCTTGTGAGAAAGTAGCC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAATTAAAAATTAAAATAATATTTAGGGCTTGTGAGAAAGTAGCC  1135

seq1  CAGAGAATTC  1160
      ||||||||||
seq2  CAGAGAATTC  1145


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