BAC Information

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BAC

Clone NameB6Ng01-135O19
Chromosome6 (Build37)
Map Location 84,259,926 - 84,400,246
singlet/doubletdoublet
Overlap genenone
Upstream geneMthfd2, Mobk1b, Bola3, D230004J03Rik, Dguok, Actg2, Stambp, LOC664956, Clec4f, Cd207, Vax2os2, Vax2os1, Vax2, Atp6v1b1, 1700124L16Rik, Ankrd53, Tex261, LOC665004, Nagk, Paip2b, LOC384450, LOC622683, LOC380687, LOC665098, LOC676366, Zfml, Dysf, LOC665114
Downstream gene4930504D19Rik, Cyp26b1, Exoc6b, LOC665129, Npm3-ps1, EG545861, EG623016, Spr, LOC665086, LOC665089, Emx1, Sfxn5, Rab11fip5, Noto, Smyd5, 1700040I03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135O19.bB6Ng01-135O19.g
ACCDH935842DH935843
length703535
definitionDH935842|Mus musculus domesticus DNA, BAC clone: B6Ng01-135O19, 5' end.DH935843|Mus musculus domesticus DNA, BAC clone: B6Ng01-135O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,259,926 - 84,260,628)(84,399,706 - 84,400,246)
sequence
gaattcatatcacttgggagataactgggctcagaggccaggaaagaaga
gaagatgaactcagagataagacaaatagtgtggatagacagggaggagt
tcagtttgtgagctgacaggagcttccttgggcttcactctgtctggttg
taggtcaagcacctaccttgcaggatgctccacgagaagttaacatattc
attcattcattcattcattcattcattcattcattcacttactcatccat
ccatccatccatccatccatccatccatccacccacccatccattcttta
gtatctctgtcttttgtgtgttatgctgtttaattcccttgagcaacgta
agatgaatctggggcacagcagagaacacatagcccaaggctgaggtctt
caaggaggactcaggcattttcatataagatatgacagtgttcacaagac
cttcttgattccatgaactctccacagggtttgaggaagtggtattctgt
tcctttgaagcagagaggggcagggggcagggggcagggtctaccagtct
ctgcttcctagcccagttcccatggctctgacctggtagagaaggggtat
gcattggaggtactctgttggggccatcctggttagtgctagagcccaga
gaactcacaacacttctaggggcaatcagtttgggaggggagtgggaacg
ggg
ttaaaacttgatagaaaagtcaattaattgtctaatctccaaatattaag
aataagaatttttgtagtatagtctcagtaataaacagatacattggctt
aatagtaccagaagaaagacacattcttggcaaaggaaacaggcgtggtg
ccttctaactctgctggaaatgggaatgggtgcaatctttctgaagggcc
attttggcacaaattattttcctaagaaattgcatgtccaggaatttgtt
caaaaattcattgttagctatagaagcctttaagagcttgtatactgcct
aaatgactcccgcggggaactggaatgatgagacacagtaccataaaatt
acatgcagccaataaagtattattatagaaatataaagattagcatcaca
ctgaataaagtgaaagggaacgttagtgaagcttacatatgtatttcttt
aaaacacatataccaatttaaagtgtaattcaactattgttatttcaatt
gtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_84259926_84260628
seq2: B6Ng01-135O19.b_48_750

seq1  GAATTCATATCACTTGGGAGATAACTGGGCTCAGAGGCCAGGAAAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATCACTTGGGAGATAACTGGGCTCAGAGGCCAGGAAAGAAGA  50

seq1  GAAGATGAACTCAGAGATAAGACAAATAGTGTGGATAGACAGGGAGGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGAACTCAGAGATAAGACAAATAGTGTGGATAGACAGGGAGGAGT  100

seq1  TCAGTTTGTGAGCTGACAGGAGCTTCCTTGGGCTTCACTCTGTCTGGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTGTGAGCTGACAGGAGCTTCCTTGGGCTTCACTCTGTCTGGTTG  150

seq1  TAGGTCAAGCACCTACCTTGCAGGATGCTCCACGAGAAGTTAACATATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCAAGCACCTACCTTGCAGGATGCTCCACGAGAAGTTAACATATTC  200

seq1  ATTCATTCATTCATTCATTCATTCATTCATTCATTCACTTACTCATCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCATTCATTCATTCATTCATTCATTCATTCACTTACTCATCCAT  250

seq1  CCATCCATCCATCCATCCATCCATCCATCCACCCACCCATCCATTCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATCCATCCATCCATCCATCCATCCACCCACCCATCCATTCTTTA  300

seq1  GTATCTCTGTCTTTTGTGTGTTATGCTGTTTAATTCCCTTGAGCAACGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTCTGTCTTTTGTGTGTTATGCTGTTTAATTCCCTTGAGCAACGTA  350

seq1  AGATGAATCTGGGGCACAGCAGAGAACACATAGCCCAAGGCTGAGGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATCTGGGGCACAGCAGAGAACACATAGCCCAAGGCTGAGGTCTT  400

seq1  CAAGGAGGACTCAGGCATTTTCATATAAGATATGACAGTGTTCACAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGGACTCAGGCATTTTCATATAAGATATGACAGTGTTCACAAGAC  450

seq1  CTTCTTGATTCCATGAACTCTCCACAGGGTTTGAGGAAGTGGTATTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGATTCCATGAACTCTCCACAGGGTTTGAGGAAGTGGTATTCTGT  500

seq1  TCCTTTGAAGCAGAGAGGGGCAGGGGGCAGGGGGCAGGGTCTACCAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGAAGCAGAGAGGGGCAGGGGGCAGGGGGCAGGGTCTACCAGTCT  550

seq1  CTGCTTCCTAGCCCAGTTCCCATGGCTCTGACCTGGTAGAGAAGGGGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCTAGCCCAGTTCCCATGGCTCTGACCTGGTAGAGAAGGGGTAT  600

seq1  GCATTGGAGGTACTCTGTTGGGGCCATCCTGGTTAGTGCTAGAGCCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGAGGTACTCTGTTGGGGCCATCCTGGTTAGTGCTAGAGCCCAGA  650

seq1  GAACTCACAACACTTCTAGGGGCAATCAGTTTGGGAGGGGAGTGGGAACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCACAACACTTCTAGGGGCAATCAGTTTGGGAGGGGAGTGGGAACG  700

seq1  GGG  703
      |||
seq2  GGG  703

seq1: chr6_84399706_84400246
seq2: B6Ng01-135O19.g_69_609 (reverse)

seq1  TACACACACACACACACACACACACATACACACACAATTGAAATAACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACACACACACACACACACATACACACACAATTGAAATAACAAT  50

seq1  AGTTGAATTACACTTTAAATTGGTATATGTGTTTTAAAGAAATACATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAATTACACTTTAAATTGGTATATGTGTTTTAAAGAAATACATATG  100

seq1  TAAGCTTCACTAACGTTCCCTTTCACTTTATTCAGTGTGATGCTAATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTCACTAACGTTCCCTTTCACTTTATTCAGTGTGATGCTAATCTT  150

seq1  TATATTTCTATAATAATACTTTATTGGCTGCATGTAATTTTATGGTACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCTATAATAATACTTTATTGGCTGCATGTAATTTTATGGTACTG  200

seq1  TGTCTCATCATTCCAGTTCCCCGCGGGAGTCATTTAGGCAGTATACAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATCATTCCAGTTCCCCGCGGGAGTCATTTAGGCAGTATACAAGC  250

seq1  TCTTAAAGGCTTCTATAGCTAACAATGAATTTTTGAACAAATTCCTGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAGGCTTCTATAGCTAACAATGAATTTTTGAACAAATTCCTGGAC  300

seq1  ATGCAATTTCTTAGGAAAATAATTTGTGCCAAAATGGCCCTTCAGAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATTTCTTAGGAAAATAATTTGTGCCAAAATGGCCCTTCAGAAAGA  350

seq1  TTGCACCCATTCCCATTTCCAGCAGAGTTAGAAGGCACCACGCCTGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACCCATTCCCATTTCCAGCAGAGTTAGAAGGCACCACGCCTGTTTC  400

seq1  CTTTGCCAAGAATGTGTCTTTCTTCTGGTACTATTAAGCCAATGTATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCAAGAATGTGTCTTTCTTCTGGTACTATTAAGCCAATGTATCTG  450

seq1  TTTATTACTGAGACTATACTACAAAAATTCTTATTCTTAATATTTGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTACTGAGACTATACTACAAAAATTCTTATTCTTAATATTTGGAGA  500

seq1  TTAGACAATTAATTGACTTTTCTATCAAGTTTTAAGAATTC  541
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAATTAATTGACTTTTCTATCAAGTTTTAAGAATTC  541