BAC Information

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BAC

Clone NameB6Ng01-137A02
Chromosome6 (Build37)9 (Build37)
Map Location 18,835,448 - 18,835,96823,836,308 - 23,837,388
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137A02.bB6Ng01-137A02.g
ACCDH936633DH936634
length1,0171,066
definitionDH936633|Mus musculus domesticus DNA, BAC clone: B6Ng01-137A02, 5' end.DH936634|Mus musculus domesticus DNA, BAC clone: B6Ng01-137A02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(23,836,308 - 23,837,388)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagactttgaagtttttatcat
acagatctttcacttccttagttagagtcacgccgagatattttatatta
tttgtgactattgagaaggtgttgtttccctaatttctttctcagctgtt
tatctttgtgtagagaa
gaattcattgtcaggctagcactttcttccacactcagagttctaaccta
attatagagtgatggctaatctacatttccacctctaattgaaggtgtgt
ttgtaaacttcagaactggagtttcaattgtaagtcctagaatttatttc
aaaactccactgtggctatatctggtataggaagattggaatccaaaact
tgatatatattccaataggttggaataacctatccttgttgcgaagcact
cccagaagagcccaactacctctgaaaacaaagggcaagaacttcattta
gaaataaatgagggaaagatggatggacttattggaagagacatatcacc
agtgataaaacccaattaacctcctgtcttagccactatcccattgttct
gtagagacaccatgatcacagcaactcttataaaagaaaacatttaattg
aggctagcttacagtttcagaggtttcatttgctattattatgatgggtt
gcatgaagacatgcaggcagacatggtactagagaaagatctgagtgttt
tatgtccagatccatagacaacaggaagagagaaacactggcttgagctc
tcaaaaccctaaatcccagtcaccatgacagatttcctcccacaaggcca
accctcctaatcctttcaaaaaatggcactccctgataaccaagcattca
aacctatggagatcattctctctcaaacaaccatatctccccttttctct
tcctcctcatcttcctccttattctgtcttctttccttgcaccttcttta
tcttttttctttctctccattctcacagatgattcaatttaattcacaat
aaaagataattttcattgctcctcaaaacttgctgaacaccgagattact
ctcttatctacagtgtaggaaaaacacaatacagagtgtcatctacatgc
agaattctggatccattaagtaacttgtagttggaagcagatctatggtg
gtaaagtgcagacttggcaatatttcccagtcatgtatgaccacccactt
acatctttatatgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-137A02.b_41_562 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||||||||||| |||
seq2  GGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| |||||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGACACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAACAACCCCATTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr9_23836308_23837388
seq2: B6Ng01-137A02.g_68_1133

seq1  GAATTCATTGTCAGGCTAGCACTTTCTTCCACACTCAGAGTTCTAACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTCAGGCTAGCACTTTCTTCCACACTCAGAGTTCTAACCTA  50

seq1  ATTATAGAGTGATGGCTAATCTACATTTCCACCTCTAATTGAAGGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGAGTGATGGCTAATCTACATTTCCACCTCTAATTGAAGGTGTGT  100

seq1  TTGTAAACTTCAGAACTGGAGTTTCAATTGTAAGTCCTAGAATTTATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAACTTCAGAACTGGAGTTTCAATTGTAAGTCCTAGAATTTATTTC  150

seq1  AAAACTCCACTGTGGCTATATCTGGTATAGGAAGATTGGAATCCAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCCACTGTGGCTATATCTGGTATAGGAAGATTGGAATCCAAAACT  200

seq1  TGATATATATTCCAATAGGTTGGAATAACCTATCCTTGTTGCGAAGCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATATTCCAATAGGTTGGAATAACCTATCCTTGTTGCGAAGCACT  250

seq1  CCCAGAAGAGCCCAACTACCTCTGAAAACAAAGGGCAAGAACTTCATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAGAGCCCAACTACCTCTGAAAACAAAGGGCAAGAACTTCATTTA  300

seq1  GAAATAAATGAGGGAAAGATGGATGGACTTATTGGAAGAGACATATCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAATGAGGGAAAGATGGATGGACTTATTGGAAGAGACATATCACC  350

seq1  AGTGATAAAACCCAATTAACCTCCTGTCTTAGCCACTATCCCATTGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAAAACCCAATTAACCTCCTGTCTTAGCCACTATCCCATTGTTCT  400

seq1  GTAGAGACACCATGATCACAGCAACTCTTATAAAAGAAAACATTTAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGACACCATGATCACAGCAACTCTTATAAAAGAAAACATTTAATTG  450

seq1  AGGCTAGCTTACAGTTTCAGAGGTTTCATTTGCTATTATTATGATGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGCTTACAGTTTCAGAGGTTTCATTTGCTATTATTATGATGGGTT  500

seq1  GCATGAAGACATGCAGGCAGACATGGTACTAGAGAAAGATCTGAGTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAGACATGCAGGCAGACATGGTACTAGAGAAAGATCTGAGTGTTT  550

seq1  TATGTCCAGATCCATAGACAACAGGAAGAGAGAAACACTGGCTTGAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCAGATCCATAGACAACAGGAAGAGAGAAACACTGGCTTGAGCTC  600

seq1  TCAAAACCCTAAATCCCAGTCACCATGACAGATTTCCTCCCACAAGGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACCCTAAATCCCAGTCACCATGACAGATTTCCTCCCACAAGGCCA  650

seq1  ACCCTCCTAATCCTTTCAAAAAATGGCACTCCCTGATAACCAAGCATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCTAATCCTTTCAAAAAATGGCACTCCCTGATAACCAAGCATTCA  700

seq1  AACCTATGGAGATCATTCTCTCTCAAACAACCATATCTCCCCTTTTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATGGAGATCATTCTCTCTCAAACAACCATATCTCCCCTTTTCTCT  750

seq1  TCCTCCTCATCTTCCTCCTTATTCTGTCTTCTTTCCTTGCACCTTCTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCATCTTCCTCCTTATTCTGTCTTCTTTCCTTGCACCTTCTTTA  800

seq1  TCTTTTTTCTTTCTCTCCATTCTCACAGATGATTCAA-TTAATTCACAAT  849
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTTTTTTCTTTCTCTCCATTCTCACAGATGATTCAATTTAATTCACAAT  850

seq1  AAAAGATAATTTTCATTGCTCCCCAAAACTTTGCTGAACACCGAGATTAC  899
      |||||||||||||||||||||| |||||| ||||||||||||||||||||
seq2  AAAAGATAATTTTCATTGCTCCTCAAAAC-TTGCTGAACACCGAGATTAC  899

seq1  TCTCTTATCTACAGTGTAGGACAAACACAATACAGAGTGTCATCTACATG  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTCTTATCTACAGTGTAGGAAAAACACAATACAGAGTGTCATCTACATG  949

seq1  CAG-ATTCTGGGATCCATTAAGTAACTTGTAGTTGGAAGCAGAATCTTAT  998
      ||| ||||| |||||||||||||||||||||||||||||||| ||| |||
seq2  CAGAATTCT-GGATCCATTAAGTAACTTGTAGTTGGAAGCAG-ATC-TAT  996

seq1  GGTGGGTAAAAGTGCAGACTTGGCACATTAATTTACCCCAGTCAATGTTA  1048
      |||||   ||||||||||||||||| ||  ||||  ||||||| ||| ||
seq2  GGTGG--TAAAGTGCAGACTTGGCA-AT--ATTT--CCCAGTC-ATG-TA  1037

seq1  TGACCACCCAACTTACCATCTTTATAATTGCAG  1081
      ||||||||| ||||| ||||||||||  |||||
seq2  TGACCACCC-ACTTA-CATCTTTATA--TGCAG  1066