BAC Information

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BAC

Clone NameB6Ng01-137H10
Chromosome6 (Build37)
Map Location 116,945,286 - 117,075,918
singlet/doubletdoublet
Overlap genenone
Upstream geneTmcc1, LOC100043425, EG666634, EG666648, D6Wsu116e, Anubl1, March8, Alox5, LOC100043432, Olfr211, Olfr212, Olfr213, EG434080, Olfr214, Olfr215, Zfp422, Rassf4, 8430408G22Rik, C230095G01Rik, LOC100043439
Downstream geneCxcl12, LOC213422, EG640142, LOC100043777, LOC621462, EG640370, EG621705, LOC100043779, Zfp637, Zfp239, 4933440N22Rik, Hnrpf, Fxyd4, LOC232338, Rasgef1a, Galnact2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137H10.bB6Ng01-137H10.g
ACCDH936975DH936976
length1,1311,212
definitionDH936975|Mus musculus domesticus DNA, BAC clone: B6Ng01-137H10, 5' end.DH936976|Mus musculus domesticus DNA, BAC clone: B6Ng01-137H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,074,777 - 117,075,918)(116,945,286 - 116,946,503)
sequence
gaattcctggcctctgcaattcttcctgaaaggctccctttcctctacag
ccagagagcccatcccaaagcatagcaagggcctccactttctagaagag
aacacacacttagcttactcttattagaccttagcagctctcaagagaga
aatgagaccccatacatgccatttcctttatggacagagaaggagctgtg
tataatctatatcctgcaaagaccctggttggaagctggctgaaactccc
tagcctactcttatggcttctggtgcaagttgtttagggtgcccactctg
ccatcagcatcttggacttccacatccttcctctccagcatctttccttt
ctcagtgaagaacccacccatcttaagcactaattcaagcaactcatcta
agcaaaagactaagtcccttcctcacccaacttgctaaaccctgaagttc
agttaactcacttcctagcgcctccctgtctagatctggatctgcctcct
gacctatcttcacttctgtgttgccaagctgcctcttaatgtcttccctc
tccactagtgttcaccctgtctgacttcaggaagaaccactggagacagt
cattctaagcatctgaccaggtaggcccaccgtacagctgctactataca
agtatccttcataagtccatggcctgcaaccaatgcgcccctccccagca
ggggccctgccccatggagctgcactgaccccttcatgtctctcagccac
cactgtgaaataaggctagtcagaggtggcaggtgtggcctccaagggat
cttcctggcagtccggcctcatgggtggtctgataaattgcttctggctg
ctgttcggaccaactgcacccaaccaactgatgattctaaaaagggattt
ccagggtatggatctcattagctatgcataggacccaggaggccccaaca
tgggtcattacttggaactgggtactagttgctggtggcctgggaacctg
gttcaggtgacttagctctaagaggctagagtctaactcagaaaccctga
ctgtgttcctttctgaccataaaggagggtgtggacacactacagcttga
gcatggagagggatcagaagagatagaattt
gaattcactggaacacacacacacatacacaacatgattacacacacaca
cacacaccaatgaaagtacaaagtggagacattgggatagatgacccgcg
tacagctgagcactcacagttacatatacccagcctctgaccagttagct
atgagtctctgtgctaaccattatggaattggtctgacccaagttatgag
caacacaaatctaggattgcaaacacaactatttaacaggcagtttggca
gcaagataatttaacccagcaacaggccgttctccctcagtggcctatga
tctcccatcttttggctgataagcaagtccaggcatgaagttctcctgtg
aggaaattcctcgtaaactacagaaagagactgatattccctataaccac
cacaccactatgtatctagtgagctgtgtagccaggcaggttagtaccgc
agcctgcagagcgggaagctggatacacacattaatgtccccatcccaca
ccccctgcagcctgcatagaaccctctggcactaagtaaactagccagca
ggaaaagcatttcttgtgcaggttgaggttgatttctctacgtcctgcat
ccaaagagagtggcattgtcagcatcagggctgaccttctagttttgggg
agcacccaaaaggatcagcaatggccagtgtttggggccccctcaccaat
gctaacccagccacactcctctcttcttcccattccactgccctcattaa
aacctttaagcccaaaaagtcctccccattctcttttaggctattccccc
ctgtccctctggttatttttcctgagtttgaagaacataagtttcgatat
aactttttatgaagcttccatttttggttaatactcttgcccctacctca
tttcctgccccccaccctcttccaagtgcgacttttctgttctcagtatt
cctctcccctaccatttacctgaatattactgtctctcttccatactata
ttccttcccatggtctatttccagtttccagccagcattcaagggtattc
cgatttaacactcaaaccgtatgattgaacttagaccgcaaaaggagaga
gatggtggtgaatctgctcttcctgggtgtgggtgacctcacccgtgtag
aaatatttcagaacctcatttcttgcaaggtttttgtgtggccctctggg
taccaaggcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_117074777_117075918
seq2: B6Ng01-137H10.b_50_1180 (reverse)

seq1  AAATTCTATCTC-TCTGGATCCTCT-CATGCCTCAGGCCTGTAGTTGTGT  48
      |||||||||||| ||||   ||||| |||| |||| | |||||| |||||
seq2  AAATTCTATCTCTTCTGATCCCTCTCCATG-CTCAAG-CTGTAG-TGTGT  47

seq1  CCACATCCCTCCCTATAATGGTCAGAAAGAGAACACCAAGTCAGTGTTTC  98
      ||||| ||||||   | |||||||||||| ||||||  |||||| |||||
seq2  CCACA-CCCTCC--TTTATGGTCAGAAAG-GAACAC--AGTCAGGGTTTC  91

seq1  TGAGTAAGACTTCTAAGCTTCTTAGAGCTAAGTCACCTGGACAAGGTCCC  148
      ||||| |||| ||| ||| |||||||||||||||||||| || |||| ||
seq2  TGAGTTAGAC-TCT-AGCCTCTTAGAGCTAAGTCACCTGAACCAGGTTCC  139

seq1  AAGGCCA-CAGCAACTAGTACCCAGTTCCAAGTAATGACCCATGTTGGGG  197
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCACCAGCAACTAGTACCCAGTTCCAAGTAATGACCCATGTTGGGG  189

seq1  CCTCCTGGGTCCTATTGCATAGCTAATGAGATCCATACCCTGGAAAATCC  247
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  CCTCCTGGGTCCTA-TGCATAGCTAATGAGATCCATACCCTGG-AAATCC  237

seq1  CTTTTTAGAATCATCAGTTGGTTGGGTGCAGTTGGTCCGAACAGCAGCCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAGAATCATCAGTTGGTTGGGTGCAGTTGGTCCGAACAGCAGCCA  287

seq1  GGAGCAATTTATCAGACCACCCATGAGGCCGGACCTGCCAGGAAGATCCC  347
      | ||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAAGCAATTTATCAGACCACCCATGAGGCCGGA-CTGCCAGGAAGATCCC  336

seq1  TTGGAGGCCACACCTGCCACCTCTGACTAGCCTTATTTCACAGTGGTGGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGCCACACCTGCCACCTCTGACTAGCCTTATTTCACAGTGGTGGC  386

seq1  TGAGAGACATGAAGGGGTCAGTGCAGCTCCATGGGGCAGGGCCCCTGCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGACATGAAGGGGTCAGTGCAGCTCCATGGGGCAGGGCCCCTGCTG  436

seq1  GGGAGGGGCGCATTGGTTGCAGGCCATGGACTTATGAAGGATACTTGTAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGGCGCATTGGTTGCAGGCCATGGACTTATGAAGGATACTTGTAT  486

seq1  AGTAGCAGCTGTACGGTGGGCCTACCTGGTCAGATGCTTAGAATGACTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCAGCTGTACGGTGGGCCTACCTGGTCAGATGCTTAGAATGACTGT  536

seq1  CTCCAGTGGTTCTTCCTGAAGTCAGACAGGGTGAACACTAGTGGAGAGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTGGTTCTTCCTGAAGTCAGACAGGGTGAACACTAGTGGAGAGGG  586

seq1  AAGACATTAAGAGGCAGCTTGGCAACACAGAAGTGAAGATAGGTCAGGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTAAGAGGCAGCTTGGCAACACAGAAGTGAAGATAGGTCAGGAG  636

seq1  GCAGATCCAGATCTAGACAGGGAGGCGCTAGGAAGTGAGTTAACTGAACT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATCCAGATCTAGACAGGGAGGCGCTAGGAAGTGAGTTAACTGAACT  686

seq1  TCAGGGTTTAGCAAGTTGGGTGAGGAAGGGACTTAGTCTTTTGCTTAGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTTTAGCAAGTTGGGTGAGGAAGGGACTTAGTCTTTTGCTTAGAT  736

seq1  GAGTTGCTTGAATTAGTGCTTAAGATGGGTGGGTTCTTCACTGAGAAAGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCTTGAATTAGTGCTTAAGATGGGTGGGTTCTTCACTGAGAAAGG  786

seq1  AAAGATGCTGGAGAGGAAGGATGTGGAAGTCCAAGATGCTGATGGCAGAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGCTGGAGAGGAAGGATGTGGAAGTCCAAGATGCTGATGGCAGAG  836

seq1  TGGGCACCCTAAACAACTTGCACCAGAAGCCATAAGAGTAGGCTAGGGAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACCCTAAACAACTTGCACCAGAAGCCATAAGAGTAGGCTAGGGAG  886

seq1  TTTCAGCCAGCTTCCAACCAGGGTCTTTGCAGGATATAGATTATACACAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCCAGCTTCCAACCAGGGTCTTTGCAGGATATAGATTATACACAG  936

seq1  CTCCTTCTCTGTCCATAAAGGAAATGGCATGTATGGGGTCTCATTTCTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTCTGTCCATAAAGGAAATGGCATGTATGGGGTCTCATTTCTCT  986

seq1  CTTGAGAGCTGCTAAGGTCTAATAAGAGTAAGCTAAGTGTGTGTTCTCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAGCTGCTAAGGTCTAATAAGAGTAAGCTAAGTGTGTGTTCTCTT  1036

seq1  CTAGAAAGTGGAGGCCCTTGCTATGCTTTGGGATGGGCTCTCTGGCTGTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAGTGGAGGCCCTTGCTATGCTTTGGGATGGGCTCTCTGGCTGTA  1086

seq1  GAGGAAAGGGAGCCTTTCAGGAAGAATTGCAGAGGCCAGGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGGGAGCCTTTCAGGAAGAATTGCAGAGGCCAGGAATTC  1131

seq1: chr6_116945286_116946503
seq2: B6Ng01-137H10.g_68_1279

seq1  GAATTCACTGGAACACACACACACATACACAACATGATTACACACACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGAACACACACACACATACACAACATGATTACACACACACA  50

seq1  CACACACCAATGAAAGTACAAAGTGGAGACATTGGGATAGATGACCCGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCAATGAAAGTACAAAGTGGAGACATTGGGATAGATGACCCGCG  100

seq1  TACAGCTGAGCACTCACAGTTACATATACCCAGCCTCTGACCAGTTAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTGAGCACTCACAGTTACATATACCCAGCCTCTGACCAGTTAGCT  150

seq1  ATGAGTCTCTGTGCTAACCATTATGGAATTGGTCTGACCCAAGTTATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCTCTGTGCTAACCATTATGGAATTGGTCTGACCCAAGTTATGAG  200

seq1  CAACACAAATCTAGGATTGCAAACACAACTATTTAACAGGCAGTTTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAAATCTAGGATTGCAAACACAACTATTTAACAGGCAGTTTGGCA  250

seq1  GCAAGATAATTTAACCCAGCAACAGGCCGTTCTCCCTCAGTGGCCTATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATAATTTAACCCAGCAACAGGCCGTTCTCCCTCAGTGGCCTATGA  300

seq1  TCTCCCATCTTTTGGCTGATAAGCAAGTCCAGGCATGAAGTTCTCCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCATCTTTTGGCTGATAAGCAAGTCCAGGCATGAAGTTCTCCTGTG  350

seq1  AGGAAATTCCTCGTAAACTACAGAAAGAGACTGATATTCCCTATAACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATTCCTCGTAAACTACAGAAAGAGACTGATATTCCCTATAACCAC  400

seq1  CACACCACTATGTATCTAGTGAGCTGTGTAGCCAGGCAGGTTAGTACCGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCACTATGTATCTAGTGAGCTGTGTAGCCAGGCAGGTTAGTACCGC  450

seq1  AGCCTGCAGAGCGGGAAGCTGGATACACACATTAATGTCCCCATCCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCAGAGCGGGAAGCTGGATACACACATTAATGTCCCCATCCCACA  500

seq1  CCCCCTGCAGCCTGCATAGAACCCTCTGGCACTAAGTAAACTAGCCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTGCAGCCTGCATAGAACCCTCTGGCACTAAGTAAACTAGCCAGCA  550

seq1  GGAAAAGCATTTCTTGTGCAGGTTGAGGTTGATTTCTCTACGTCCTGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGCATTTCTTGTGCAGGTTGAGGTTGATTTCTCTACGTCCTGCAT  600

seq1  CCAAAGAGAGTGGCATTGTCAGCATCAGGGCTGACCTTCTAGTTTTGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAGAGTGGCATTGTCAGCATCAGGGCTGACCTTCTAGTTTTGGGG  650

seq1  AGCACCCAAAAGGATCAGCAATGGCCAGTGTTTGGGGCCCCCTCACCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCAAAAGGATCAGCAATGGCCAGTGTTTGGGGCCCCCTCACCAAT  700

seq1  GCTAACCCAGCCACACTCCTCTCTTCTTCCCATTCCACTGCCCTCATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACCCAGCCACACTCCTCTCTTCTTCCCATTCCACTGCCCTCATTAA  750

seq1  AACCTTTAAGCCCAAAAAGTCCTTCCCCATTCTCTTTTAGGCTATTCCCC  800
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AACCTTTAAGCCCAAAAAGTCC-TCCCCATTCTCTTTTAGGCTATTCCCC  799

seq1  CCTGTCCCCTCTGGTTAATTTTTCCTGAGTTTGAAGAACATAAGTTTCGA  850
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTGT-CCCTCTGGTT-ATTTTTCCTGAGTTTGAAGAACATAAGTTTCGA  847

seq1  TATAACTTTTTATGAAGCTTCCA-TTTTGGTTAATACTCTTGCCCCTACC  899
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TATAACTTTTTATGAAGCTTCCATTTTTGGTTAATACTCTTGCCCCTACC  897

seq1  TCATTTCCTGCCCCCCACCCTCTTCCAAGTGCGAACTTTTCTGTTCCCAG  949
      ||||||||||||||||||||||||||||||||| |||||||||||| |||
seq2  TCATTTCCTGCCCCCCACCCTCTTCCAAGTGCG-ACTTTTCTGTTCTCAG  946

seq1  TATTCCTCTCCACTACCAATTTACCTGAATATTACTGTCTCTCTTCCATT  999
      ||||||||||| ||||| |||||||||||||||||||||||||||||| |
seq2  TATTCCTCTCCCCTACC-ATTTACCTGAATATTACTGTCTCTCTTCCA-T  994

seq1  ACTATATT-CTTCCCAT-GTCTAATTTCCAGTTTCCAGTCAGCATCCAA-  1046
      |||||||| |||||||| |||| ||||||||||||||| |||||| ||| 
seq2  ACTATATTCCTTCCCATGGTCT-ATTTCCAGTTTCCAGCCAGCATTCAAG  1043

seq1  GGTATTCCAGATTAAACACACAAAACAGTAGATTTGAACCTAGACGCCAA  1096
      |||||||| |||| ||||| | |||| |||   |||||| ||||| |  |
seq2  GGTATTCC-GATTTAACACTC-AAACCGTATGATTGAACTTAGAC-CGCA  1090

seq1  AAAGGAGAGAGAATGTGTGAAATCTG-TCTTTCTGGGTGTTGGTGACCTC  1145
      ||||||||||||  |||   |||||| |||| |||||||| |||||||||
seq2  AAAGGAGAGAGATGGTGGTGAATCTGCTCTTCCTGGGTGTGGGTGACCTC  1140

seq1  ACCC-TGTAGAATATTTTCCAAGAACATCCATTTCCCTGCAAGGTTTGT-  1193
      |||| |||||||   ||||  ||||| | ||||| | |||||||||| | 
seq2  ACCCGTGTAGAAATATTTC--AGAACCT-CATTT-CTTGCAAGGTTTTTG  1186

seq1  TGTGGGCCTCT--GTGCCAGAGGCTTC  1218
      ||||| |||||  || ||| |||||||
seq2  TGTGGCCCTCTGGGTACCA-AGGCTTC  1212