BAC Information

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BAC

Clone NameB6Ng01-137J07
Chromosome3 (Build37)6 (Build37)
Map Location 15,185,900 - 15,186,6587,226,463 - 7,226,592
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985
Downstream geneLOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3, LOC100040034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137J07.bB6Ng01-137J07.g
ACCDH937065DH937066
length760958
definitionDH937065|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J07, 5' end.DH937066|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(15,185,900 - 15,186,658)(7,226,463 - 7,226,592)
sequence
gaattcaggaaggagtgaaagtttgaggtctagagagcactggtatttga
gggggaaatttagaagatggtataggcatcacaagagaagggccaggaaa
gcaaaactgaagagcacattgtgaaaaaccagggggtcgggggaggggat
aaatgtccaaggtaagggacacccaatagtgccagcaaagtacaaataaa
acagcagctgtaaggaatccagttgaccttgggcctacaaggtagctgaa
ggtgtgcacaatgagttaggagttaggtcaggtcttaagtgcattggaaa
gggcagaagactgattcaggttggccatgagtggacaggagggagaatgt
ggccagcgagagcctgaaaacctctcttaggtactaggcagcaaagaaaa
ttgtacagaccaagatgaggatagcagacaggttgttttgttttgttttc
tttccacttttggaagtgagaagtataagaaagacacaaagaagtctctg
tgggcaggaaacagccatcggggaaaggaaggatgacggagctttacctc
ggcattggtagtgatgagaagcactgagtagagtttaagtcaagtgtggg
gagggtctgcatcccttctgaagaggaccaggagaggaagaaggctaagc
tgctaacataggccaaagagcaaggagaagtcgagtttcccttcttggga
tgcttaatgttccaattaagtaaaaaggtgaggtcagataacagaaggct
tggaaaaaca
gaattctaggtttctgggctaatatccacttatcagtgagtgcatatcaa
gtgacttcttttgtgattgggttacatcactcaggatgatatcctccaga
tacatccatttttctaagaatttcataaattcattgtttttaatagctga
gaactttctaaaaatggaagcaaaaacaatgaagaaaacccaaagggaga
gaactctggagatagaaaccctaggaaagaaatcaggaaccatagatgtg
agcatcagcaacagaatacaagagattgaagatagaatctcagatgcaga
agattccatagaaaacatggacacaacaatccaagaaaatacaaaatgca
aaaagttcctaactcaaaacatccagggattccaggacataatggaagag
caaatctggagtagatgagaaagaagatttttcaacttaaagggccagca
gatatcttcaacaaaattataaaagaaagcttcccatacctaaagaaagg
gatgttcatgaacatacaagaagcctacagaactccaaatagactggagc
agaaaagaaattcctcccgacacataataatcagaacaacaaatgcacta
aataaagacagaatactcaaagcagtaagggaaaaagtcaagtaacatat
aaaggcaggcctattagattttatcctaaaacaaaaaggatataccttct
tctcagcacctcatggtacctcctacaaaactgaccatataattggtcac
aaaacaggcctcaacagatacaaattattgaaattatcccatgcatccta
tcagatcaccacggactaaggctaatcttcaataacagcataaatgttag
aaagccaacattctatgtggaaactgaacacactctaccgaatggatatc
ttggtcaaggaagaaataaaaaaagaaatgaaagaccttttagagtttaa
tgaaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15185900_15186658
seq2: B6Ng01-137J07.b_46_805

seq1  GAATTCAGGAAGGAGTGAAAGTTTGAGGTCTAGAGAGCACTGGTATTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAGGAGTGAAAGTTTGAGGTCTAGAGAGCACTGGTATTTGA  50

seq1  GGGGGAAATTTAGAAGATGGTATAGGCATCACAAGAGAAGGGCCAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAATTTAGAAGATGGTATAGGCATCACAAGAGAAGGGCCAGGAAA  100

seq1  GCAAAACTGAAGAGCACATTGTGAAAAACCAGGGGGTCGGGGGAGGGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACTGAAGAGCACATTGTGAAAAACCAGGGGGTCGGGGGAGGGGAT  150

seq1  AAATGTCCAAGGTAAGGGACACCCAATAGTGCCAGCAAAGTACAAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCAAGGTAAGGGACACCCAATAGTGCCAGCAAAGTACAAATAAA  200

seq1  ACAGCAGCTGTAAGGAATCCAGTTGACCTTGGGCCTACAAGGTAGCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCTGTAAGGAATCCAGTTGACCTTGGGCCTACAAGGTAGCTGAA  250

seq1  GGTGTGCACAATGAGTTAGGAGTTAGGTCAGGTCTTAAGTGCATTGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCACAATGAGTTAGGAGTTAGGTCAGGTCTTAAGTGCATTGGAAA  300

seq1  GGGCAGAAGACTGATTCAGGTTGGCCATGAGTGGACAGGAGGGAGAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAAGACTGATTCAGGTTGGCCATGAGTGGACAGGAGGGAGAATGT  350

seq1  GGCCAGCGAGAGCCTGAAAACCTCTCTTAGGTACTAGGCAGCAAAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCGAGAGCCTGAAAACCTCTCTTAGGTACTAGGCAGCAAAGAAAA  400

seq1  TTGTACAGACCAAGATGAGGATAGCAGACAGGTTGTTTTGTTTTGTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAGACCAAGATGAGGATAGCAGACAGGTTGTTTTGTTTTGTTTTC  450

seq1  TTTCCACTTTTGGAAGTGAGAAGTATAAGAAAGACACAAAGAAGTCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACTTTTGGAAGTGAGAAGTATAAGAAAGACACAAAGAAGTCTCTG  500

seq1  TGGGCAGGAAACAGCCATCGGGGAAAGGAAGGATGACGGAGCTTTACCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGGAAACAGCCATCGGGGAAAGGAAGGATGACGGAGCTTTACCTC  550

seq1  GGCATTGGTAGTGATGAGAAGCACTGAGTAGAGTTTAAGTCAAGTGTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGGTAGTGATGAGAAGCACTGAGTAGAGTTTAAGTCAAGTGTGGG  600

seq1  GAGGGTCTGCATCCCTTCTGAAGAGGACCAGGAGAGGAAGAAGGCTAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCTGCATCCCTTCTGAAGAGGACCAGGAGAGGAAGAAGGCTAAGC  650

seq1  TGCTAACATAGGCCAAAGAGCAAGGAGAAGTCGAGTTTCCCTTCTTGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAACATAGGCCAAAGAGCAAGGAGAAGTCGAGTTTCCCTTCTTGGGA  700

seq1  TGCTTAATGTTCCAATTAAGT-AAAAGGTGAGGTCAGATAACAGAAGGCT  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGCTTAATGTTCCAATTAAGTAAAAAGGTGAGGTCAGATAACAGAAGGCT  750

seq1  TGGAAAAACA  759
      ||||||||||
seq2  TGGAAAAACA  760

seq1: chr6_7226463_7226592
seq2: B6Ng01-137J07.g_87_217 (reverse)

seq1  CTCAACTATTAAAAACAATGAATTCATGAAATTCTTTGGCAAATGGATGT  50
      |||| ||||||||||||||||||| ||||||||||| |  ||||||||||
seq2  CTCAGCTATTAAAAACAATGAATTTATGAAATTCTTAGAAAAATGGATGT  50

seq1  ATCTGGAGGATATCATCCTGAGTGAGGTAACCCAATCACAAAA-AAGTCA  99
      ||||||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  ATCTGGAGGATATCATCCTGAGTGATGTAACCCAATCACAAAAGAAGTCA  100

seq1  CCTGATATGCACTCACTGATAAGTGGATATT  130
      | |||||||||||||||||||||||||||||
seq2  CTTGATATGCACTCACTGATAAGTGGATATT  131