MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-137J11
Chromosome	6 (Build37)
Map Location	89,565,841 - 89,566,363
singlet/doublet	singlet
Overlap gene	none
Upstream gene	4933428M03Rik, Mgll, Abtb1, Podxl2, LOC100043146, Mcm2, Gpr175, 4933427D06Rik, Gm1965, LOC100043153, LOC100043159, EG624483, EG624491, LOC665547, EG624537, Gm839, 4930512J16Rik, Plxna1, Chchd6
Downstream gene	Txnrd3, V1r-ps1, V1rb7, V1rb9, V1r-ps2, V1r-ps3, V1ra6, V1ra5, V1rb4, V1r-ps4, V1ra2, V1rb8, V1ra4, V1ra3, V1rb2, V1rb1, V1ra1, LOC625050, V1ra7, V1ra8, V1rb3, LOC100043191, V1r-ps5, V1ra9, BC048671, Chst13, Uroc1, Zxdc, Ccdc37, Klf15, Aldh1l1, Slc41a3
Link	Open Mouse BAC browser

no map image available.

Click to get alignment info.

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-137J11.b	B6Ng01-137J11.g
ACC	DH937073	DH937074
length	1,221	522
definition	DH937073\|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J11, 5' end.	DH937074\|Mus musculus domesticus DNA, BAC clone: B6Ng01-137J11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgtttagctctgagccccattttttaagggggttatttgatt ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga tccacttagatttgaccttagtacaaggagataagtatggatcgattccc attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat gctgtctttcttccactggatggttttggctcccttgtcgaagattaagt gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt tatccttgagaagagtttttgctatcctcggttttttgttattccagatg aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt aatggggattgcattgaatctgtagattgcttttggcaagatagccattt ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt ctgagatcttctttaattctttcttcagggacttgaagtttttatcatac agatcttcacttccttcgtagagtcacgcgagatattttatattatttgt ggctattgagaagggtgttgtttccctaatttctttctcagcctgttatt ctttgtgagagaaggccattgacctgtttgagttaattaatcagctactt cacgaagctgttatcagttaggaagtctgtgggatttaggtcctaataac attcatccactgcaaaaggaaattgacttcctttccatggtatccttgat cctcgtggctatgcctggctaatactccagacatagtgccaagggtaggg taattaagtggtgttgctcgt	gaattcagggagcttttcagagggtatataaatgctggggccctataggt gggggtcactggttgttggttcaatgggattggttgcaatttgttagtag ttgtgctaaaagaagaaacaagaagaaataaattagattcaaggatctct ccccacccccttcctctagcctttttctccaatctaatgataggggctaa aatgagggggtgggggtgttaaaaggtggaaaaaaagaacaacctactga gctgctaaaaccacctacattctccccaagaaactgcttcctgtaatgac aaattcccctcactgcccgagagcaatgatccccataaatcttgggccac atgtgccttgcctaagctgaatgcctgcactttccaggccagctgtcata caagtgtttaacaatgaagacacacgaacgagttgcgttggagacttttc ctaaggggttgtccgggctggtacaacataacttccctcacattagagca tgcccctctttcctcacccgct
quality values	Open. Hide. 61 61 27 28 61 61 61 61 39 43 35 34 35 29 24 35 50 50 43 52 55 52 52 18 16 20 13 19 25 25 59 59 24 35 24 29 52 43 59 59 45 45 52 49 45 49 43 52 49 52 52 49 52 43 43 59 43 59 39 52 52 49 43 45 43 37 36 39 36 52 35 33 49 35 36 39 41 43 43 41 41 45 39 35 43 36 27 49 36 59 49 52 52 32 39 24 36 39 49 59 59 49 49 39 41 41 45 52 39 45 43 39 27 52 59 45 45 39 52 36 43 49 45 43 59 39 34 39 32 36 36 59 59 59 38 27 26 36 43 52 39 41 52 49 38 59 59 45 44 50 52 52 52 52 49 41 39 49 52 43 39 30 18 35 35 29 31 37 41 31 32 37 36 43 49 41 36 39 36 44 39 32 25 18 59 59 44 52 49 45 39 39 36 59 33 36 41 43 45 39 43 52 39 43 45 31 36 38 39 28 43 39 36 44 36 45 44 52 59 59 59 52 59 52 59 59 59 52 52 45 59 39 39 43 39 45 43 45 45 45 59 45 52 49 59 43 49 52 52 49 52 49 59 45 45 52 43 41 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 52 49 59 52 59 59 59 59 59 43 52 52 61 41 52 52 59 52 52 59 59 59 52 59 59 59 59 59 59 61 61 61 59 59 59 59 52 59 45 43 43 37 41 37 36 36 59 43 59 59 59 59 59 61 52 59 59 52 52 59 59 52 59 59 59 52 52 52 59 59 52 59 59 59 61 59 59 52 59 59 59 59 49 61 59 59 59 52 59 59 59 59 59 59 52 52 59 59 52 52 43 59 52 36 59 43 43 49 35 37 35 41 43 50 55 55 55 49 55 52 55 55 55 55 55 49 52 52 49 49 55 52 49 52 52 55 52 61 55 52 52 52 41 52 52 52 49 52 39 52 52 43 52 52 52 49 39 52 41 55 55 49 50 50 55 61 50 55 55 55 55 50 55 55 61 55 55 55 49 55 50 50 50 50 49 50 50 47 43 50 50 55 50 55 55 61 55 36 50 50 55 55 55 49 50 50 50 61 55 55 61 50 61 32 61 53 45 47 43 50 50 50 50 50 53 53 47 47 43 50 47 43 61 50 61 52 61 52 61 53 52 50 45 50 50 37 52 53 50 50 53 53 50 35 50 50 38 53 50 50 50 61 61 36 34 39 42 34 27 39 53 47 61 52 50 53 61 42 47 61 28 61 50 53 53 53 50 50 47 52 50 53 43 50 52 47 39 40 30 36 43 39 34 40 50 47 47 45 50 53 53 53 53 50 53 53 53 53 47 47 47 47 57 53 53 53 53 53 50 53 42 36 52 47 53 47 50 53 42 57 45 53 53 38 53 45 35 53 50 53 52 57 47 26 53 50 43 39 50 50 28 43 38 29 32 37 22 47 23 18 39 42 43 47 53 42 39 38 47 47 47 53 53 38 47 47 38 53 45 47 34 32 42 45 52 45 45 30 52 52 52 45 53 35 43 22 53 53 53 53 47 35 25 45 52 38 38 34 27 18 38 50 28 46 57 44 40 52 37 37 29 14 37 47 30 50 39 37 36 37 37 40 41 42 30 47 30 42 41 37 32 27 47 44 46 53 24 32 39 20 26 53 52 37 52 34 48 37 42 44 34 53 53 44 40 27 35 53 45 38 37 29 19 29 37 30 26 46 30 34 19 21 33 37 30 44 33 41 31 33 11 37 40 30 36 57 57 40 53 43 36 31 30 36 41 37 41 31 37 31 23 36 53 53 48 29 28 32 14 29 19 45 18 28 33 47 26 30 23 23 43 27 31 12 39 36 22 32 23 30 39 39 16 30 23 27 34 45 32 48 28 21 12 29 29 47 29 25 23 13 29 29 24 34 17 13 21 35 30 18 8 11 5 17 20 27 47 29 29 29 23 29 22 29 30 30 22 23 35 29 11 16 30 21 25 19 12 29 20 15 22 12 29 46 46 43 30 24 27 28 18 25 23 29 19 21 7 7 28 30 30 28 15 28 29 34 28 29 7 30 19 11 39 22 16 33 22 11 13 17 27 17 46 17 21 11 34 23 28 19 46 26 26 29 18 27 21 22 29 29 51 6 6 5 20 25 25 20 10 12 28 29 24 17 23 31 16 46 31 6 25 23 26 32 23 38 7 16 38 27 18 29 12 14 34 17 28 19 51 19 23 19 22 23 8 14 22 19 6 5 8 16 20 15 18 10 28 25 4 4 9 7 5 20 7 23 24 5 7 15 24 20 15 18 25 11 14 8 29 11 12 34 15 7 16 5 7 10 25 8 26 4 4 5 7 27 10 11 7 5 13 20 10 17 21 8 26 14 14 25 13 10 6 18 14 25 10 17 7 6 30 17 14 15 8 12 6 7 4 9 4 5 7 21 5 26 5 23 19 24 4 5 13 11 4 5 4 4 3 9 5 4 2 3 4 4 4 5 4 5 4 4 7 6 4 17 20 19 21 26 12 4 3 5 3 3 4 13 7 10 14 6 5 4 3 4 3 3 6 4 6 14 4 6 9 6 7 18 16 7 8 11 18 9 5 1 4 1 4 13 4 4 3 1 10 5 5 4 5 3 13 12 7 7 13 14 4 8 4 10 6 4 12 3 4 3 5 8 4 3 2 3 1 1 4 3 4 3 6 10 9 19 3 6 6 7 8 7 3 5 6 7 9 10 9 4 2 2 2 2 3 5 4 3 9	Open. Hide. 61 47 61 49 36 32 15 12 29 16 19 13 18 22 30 35 45 45 35 29 59 30 52 41 39 43 45 36 45 36 52 49 43 59 52 44 49 49 52 44 39 49 49 45 43 49 44 37 59 44 37 36 44 52 45 43 39 39 39 52 55 35 33 36 59 43 43 44 30 29 41 36 27 36 45 59 52 37 40 38 39 49 43 39 43 39 39 28 39 45 45 43 43 39 39 38 23 31 36 23 36 36 39 31 39 43 49 39 37 43 50 29 52 43 28 59 49 39 43 34 44 30 59 45 34 59 41 45 39 36 35 33 39 39 30 23 59 52 49 39 27 30 31 49 43 52 41 49 49 45 49 52 59 59 52 59 59 59 59 52 36 39 43 39 44 44 38 45 36 36 39 39 32 29 36 36 32 35 39 43 32 36 36 36 29 27 27 27 49 39 36 31 34 59 52 59 43 37 31 33 29 32 35 52 52 36 59 59 59 59 52 61 59 59 59 44 23 44 22 24 19 23 13 13 13 29 13 31 17 13 18 18 13 13 23 22 18 27 43 10 27 28 13 18 13 27 27 12 19 13 23 14 13 12 13 18 11 18 16 13 12 19 15 15 26 26 15 19 12 15 12 18 12 13 13 13 13 15 13 15 20 18 19 19 18 27 23 27 16 13 13 13 22 9 11 13 24 19 25 18 12 19 19 13 27 39 19 33 23 19 20 25 13 18 38 23 18 13 14 23 29 30 13 36 19 13 13 13 12 12 13 31 19 13 15 19 20 16 19 14 18 12 11 19 12 11 19 20 25 12 19 13 15 29 12 10 12 12 11 11 11 12 8 5 11 10 12 10 8 18 13 13 16 10 14 14 13 24 9 20 13 24 18 27 27 23 13 20 9 19 11 13 11 11 11 10 18 12 10 10 10 23 10 6 12 13 12 19 15 13 13 19 13 13 24 36 27 13 27 52 39 33 28 13 13 18 19 13 11 11 16 12 23 23 15 13 11 11 23 27 13 27 24 28 31 13 19 17 13 12 13 12 12 11 23 22 15 14 13 13 12 12 23 13 27 12 12 12 15 27 10 27 31 23 14 13 12 28 12 35 13 27 28 19 23 11 12 13 24 19 13 11 14 8 12 11 24 13 13 10 15 12 9 10 10 10 11 10 10 15 11 11 12 19 11 23 15 13 13 11 15 22

Alignment Information

BAC End 1	BAC End 2
	seq1: chr6_89565841_89566363 seq2: B6Ng01-137J11.g_66_587 (reverse) seq1 AGCGGGTGAGGAAAGAGGGGCATGCTCAGATGTGGTGGAAGTTCTCTTGT 50 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\| \|\|\|\|\|\|\| \| \|\|\|\| seq2 AGCGGGTGAGGAAAGAGGGGCATGCTCTAATGTGAGGGAAGTTATGTTGT 50 seq1 ACCCTTGCAGCCATCACCACGGTAAATGTCAGCAATGTAACTCTTTCCTG 100 \|\|\| \| \| \|\| \| \|\| \| \|\|\| \|\|\| \|\|\| \| \|\|\|\|\| \|\|\| \|\| seq2 ACCAGCCCGGACAACCCCTTAGGAAAAGTCTCCAACGCAACTCGTTCGTG 100 seq1 TGTCTGCATTGTTAAACACATCTGGGACAGCTGGCCTGGAAAGTGCAGGC 150 \|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\| \| \| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TGTCTTCATTGTTAAACACTTGTATGACAGCTGGCCTGGAAAGTGCAGGC 150 seq1 ATTCAGCTTGTACATCTGGACATGTGGCCCAAGATTTATGGGGATCATTG 200 \|\|\|\|\|\|\|\|\| \|\| \| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ATTCAGCTTAGGCA-AGGCACATGTGGCCCAAGATTTATGGGGATCATTG 199 seq1 CTCTCGGGCAGTGAGGGGACTTTGTCATTACAGGAAGCAGTTTCTTGGGG 250 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CTCTCGGGCAGTGAGGGGAATTTGTCATTACAGGAAGCAGTTTCTTGGGG 249 seq1 AGAATGTAGCTGGTTTTAGCTACTTTGTAGGTTCTTCTTTTTTTCCACCT 300 \|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\| \|\| \|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AGAATGTAGGTGGTTTTAGCAGCTCAGTAGGTTGTTCTTTTTTTCCACCT 299 seq1 TTTAACACCCCCACCCCCTCATTTTAGCCCCTATCATTAGATTGGAGAAA 350 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TTTAACACCCCCACCCCCTCATTTTAGCCCCTATCATTAGATTGGAGAAA 349 seq1 AAGGCTAGAGGAAGGGGGTGGGGAGAGATCCTTGAATCTAATTTATTTCT 400 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AAGGCTAGAGGAAGGGGGTGGGGAGAGATCCTTGAATCTAATTTATTTCT 399 seq1 TCTTGTTTCTTCTTTTAGCACAACTACTAACAAATTGCAACCAATCCCAT 450 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TCTTGTTTCTTCTTTTAGCACAACTACTAACAAATTGCAACCAATCCCAT 449 seq1 TGAACCAACAACCAGTGACCCCCACCTATAGGGCCCCAGCATTTATATAC 500 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TGAACCAACAACCAGTGACCCCCACCTATAGGGCCCCAGCATTTATATAC 499 seq1 CCTCTGAAAAGCTCCCTGAATTC 523 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CCTCTGAAAAGCTCCCTGAATTC 522

BAC End 1

BAC End 2

seq1: chr6_89565841_89566363
seq2: B6Ng01-137J11.g_66_587 (reverse)

seq1  AGCGGGTGAGGAAAGAGGGGCATGCTCAGATGTGGTGGAAGTTCTCTTGT  50
      |||||||||||||||||||||||||||  |||||  ||||||| | ||||
seq2  AGCGGGTGAGGAAAGAGGGGCATGCTCTAATGTGAGGGAAGTTATGTTGT  50

seq1  ACCCTTGCAGCCATCACCACGGTAAATGTCAGCAATGTAACTCTTTCCTG  100
      |||    | | || | ||   | ||| |||  ||| | ||||| ||| ||
seq2  ACCAGCCCGGACAACCCCTTAGGAAAAGTCTCCAACGCAACTCGTTCGTG  100

seq1  TGTCTGCATTGTTAAACACATCTGGGACAGCTGGCCTGGAAAGTGCAGGC  150
      ||||| ||||||||||||| | |  |||||||||||||||||||||||||
seq2  TGTCTTCATTGTTAAACACTTGTATGACAGCTGGCCTGGAAAGTGCAGGC  150

seq1  ATTCAGCTTGTACATCTGGACATGTGGCCCAAGATTTATGGGGATCATTG  200
      |||||||||   ||   | |||||||||||||||||||||||||||||||
seq2  ATTCAGCTTAGGCA-AGGCACATGTGGCCCAAGATTTATGGGGATCATTG  199

seq1  CTCTCGGGCAGTGAGGGGACTTTGTCATTACAGGAAGCAGTTTCTTGGGG  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCTCGGGCAGTGAGGGGAATTTGTCATTACAGGAAGCAGTTTCTTGGGG  249

seq1  AGAATGTAGCTGGTTTTAGCTACTTTGTAGGTTCTTCTTTTTTTCCACCT  300
      ||||||||| ||||||||||  ||  ||||||| ||||||||||||||||
seq2  AGAATGTAGGTGGTTTTAGCAGCTCAGTAGGTTGTTCTTTTTTTCCACCT  299

seq1  TTTAACACCCCCACCCCCTCATTTTAGCCCCTATCATTAGATTGGAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACACCCCCACCCCCTCATTTTAGCCCCTATCATTAGATTGGAGAAA  349

seq1  AAGGCTAGAGGAAGGGGGTGGGGAGAGATCCTTGAATCTAATTTATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTAGAGGAAGGGGGTGGGGAGAGATCCTTGAATCTAATTTATTTCT  399

seq1  TCTTGTTTCTTCTTTTAGCACAACTACTAACAAATTGCAACCAATCCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTCTTCTTTTAGCACAACTACTAACAAATTGCAACCAATCCCAT  449

seq1  TGAACCAACAACCAGTGACCCCCACCTATAGGGCCCCAGCATTTATATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAACAACCAGTGACCCCCACCTATAGGGCCCCAGCATTTATATAC  499

seq1  CCTCTGAAAAGCTCCCTGAATTC  523
      |||||||||||||||||||||||
seq2  CCTCTGAAAAGCTCCCTGAATTC  522

BAC Information

Search Parameter

Search Result

BAC

no map image available.

BAC End Information

Alignment Information