BAC Information

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BAC

Clone NameB6Ng01-137M19
Chromosome6 (Build37)2 (Build37)
Map Location 18,835,448 - 18,835,96883,539,067 - 83,539,401
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137M19.bB6Ng01-137M19.g
ACCDH937221DH937222
length943335
definitionDH937221|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M19, 5' end.DH937222|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(83,539,067 - 83,539,401)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttaaatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacaataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagaaatttgaagttttatcatac
agatctttcacctccttagtagagtcacgccaagatattttat
actctgtagaccaggctggcctcaaactcagagatctgcctgcctctgcc
tcccaagtgcttttattttacattttaaagttttattattttaggtttat
gggtgtcttccctatatgtataaagaaaacacattttcaggtgattgatt
agttagacctataccatttttcttttgagcactgtcaactccagaactgt
agattttctaccttttaattgtaactaagaggtaactttatcatttagat
gttgacaagtatccatttaaatatgagacatgtagcctgagtcttgatcc
tggggatagatgtgtgtgtgtgtgtgtgtgtgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-137M19.b_46_567 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||  |||||||||||| |||||||||||||||||||||| |||
seq2  GGTTGTTATTGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| |||||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATTTAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr2_83539067_83539401
seq2: B6Ng01-137M19.g_74_408 (reverse)

seq1  TAACACACACACACACACACACACATCTATCCCCAGGATCAAGACTCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACACACACACACACACACACATCTATCCCCAGGATCAAGACTCAGG  50

seq1  CTACATGTCTCATATTTAAATGGATACTTGTCAACATCTAAATGATAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGTCTCATATTTAAATGGATACTTGTCAACATCTAAATGATAAAG  100

seq1  TTACCTCTTAGTTACAATTAAAAGGTAGAAAATCTACAGTTCTGGAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTCTTAGTTACAATTAAAAGGTAGAAAATCTACAGTTCTGGAGTTG  150

seq1  ACAGTGCTCAAAAGAAAAATGGTATAGGTCTAACTAATCAATCACCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCTCAAAAGAAAAATGGTATAGGTCTAACTAATCAATCACCTGAA  200

seq1  AATGTGTTTTCTTTATACATATAGGGAAGACACCCATAAACCTAAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTTTCTTTATACATATAGGGAAGACACCCATAAACCTAAAATAA  250

seq1  TAAAACTTTAAAATGTAAAATAAAAGCACTTGGGAGGCAGAGGCAGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTTAAAATGTAAAATAAAAGCACTTGGGAGGCAGAGGCAGGCAG  300

seq1  ATCTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGT  335
      |||||||||||||||||||||||||||||||||||
seq2  ATCTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGT  335