BAC Information

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BAC

Clone NameB6Ng01-141H12
Chromosome6 (Build37)
Map Location 149,125,558 - 149,262,234
singlet/doubletdoublet
Overlap geneC730024G19Rik, 2810474O19Rik
Upstream geneMlstd1, Ergic2, Tmtc1, 1110033J19Rik, EG622319, LOC100042984, LOC665372, Ipo8, Caprin2, EG665395, Tera, LOC667138, D030011O10Rik, 4833442J19Rik
Downstream geneLOC665426, LOC622481, LOC665441, Bicd1, LOC667182, LOC100039850
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141H12.bB6Ng01-141H12.g
ACCDH939920DH939921
length8631,069
definitionDH939920|Mus musculus domesticus DNA, BAC clone: B6Ng01-141H12, 5' end.DH939921|Mus musculus domesticus DNA, BAC clone: B6Ng01-141H12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,261,374 - 149,262,234)(149,125,558 - 149,126,651)
sequence
gaattctttgaacctactattatcctgtacagtatgaagacaatctctca
aaatacagacagaaaaatcccctcatgaaatattaatgcaagtaagtaaa
cttcaagtgcatactaaaattctatgccatgactctgagatatattccag
taattcaaggatagtgcaacatcacaaactaatgcaaaaaaaaaaaaatc
aaaaaggttcaaaaaggatgaaaatcagatgatctcaatagatatagaca
aagcttatttgaaatatcccaactccctttccaacttgggcccaagaaaa
tggcaccaggaaaaaggggtgataggaaaaagaagggtcattctgccagc
aactgaagtagtgatctaagggtaatatagcattaacattcattcgcagg
aaggggctttaagaagtattctttctcagcacttgtcttactcagggttt
ctattcctggacaaaacattgtgaccaagaagcaagttggggaggaaagg
gtttattcagcttacacttctatactgctgttcaccaccaaggaagtcag
gactggaactcaagcaggtcaggaagcaggagctgattcagaggccatgg
agggatgttccttactggcttgcttctcctggcttgctcagcctgctttc
ttatagaacccaagactaccagcctagagatcagcctcacttgatcacca
attgagaaaatacctcacagctggatcgcatggaggcattacctcaaatg
aagctcctttttctgtgataactccagcttgtgtcaaattgacacacaaa
actcagctagtacagcactctaagtgtatttgtagaaaggagatggggtt
agggataagggtt
gaattctgtggataagaagccgagaatccgtaaacacttggttctgaaca
ctgatttaaagtacagtgataagtgatttccctaaacctgcaggcatctt
tgatttaaagaaaagtcaaacttcagaggacaaactatatgaaaatagaa
ttacccatgaaggtaccctgtagcagaagtaaccatgttgtaggaactag
attggtttccttaagttatatatagcagagttaactatttaactaccctt
tggtaccagagcagaattagtcagtgatcacttgactagaactacttaat
taggtatatgtcttactatcctgccttaattctttatctacttaagccta
aagcttgtgtcgatacctcaacaatgaatttaggatcatcagacctcttc
acctgctccacttgcaaatgtacactgatttaatctcttttctttggttt
tcatcattattcatttccttagttggtaatttggtgtgggtggcaaattc
tagatttctagatttctagagctgggttattgatctagcactccaattct
attgggggtcctatcctggggaaccattctagagcctcccctatgttttt
cacgtagctgatcatcagtgtcctttatacataccatttgcaattaacta
gtaaacatatgctgaagtaactgaggtaacaccatcttgtcttgatcttg
actccattttgtatctgttgaggtgctttttcactgcaaactcacccctg
accatatccaaagatgtataaccaaaatagctgctgaatgtaaaaccaaa
taactgtgttctgccaaacaaatgttagaaggtctcctaacaatgttatt
gtgatttttaaattataatgctgtattcttgaacttttggctgagactct
tcatgacaagcctacttctggcttaaataaggacggttacttaccttata
ttagtgatggtttgtaccttctcacatggatagaacaagcaagtatagtc
tggagtttgtggaccctgtgagagttttcatttcagagtttcagatgaaa
ccctagactggggctggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_149261374_149262234
seq2: B6Ng01-141H12.b_47_909 (reverse)

seq1  AACCC-TATCCCTAACCCCATCTCCTTTCTACAAATACACTTAGAGTGCT  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTATCCCTAACCCCATCTCCTTTCTACAAATACACTTAGAGTGCT  50

seq1  GTACTAGCTG-GTTTTGTGTGTCAATTTGACACAAGCTGGAGTTATCACA  98
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTACTAGCTGAGTTTTGTGTGTCAATTTGACACAAGCTGGAGTTATCACA  100

seq1  GAAAAAGGAGCTTCATTTGAGGTAATGCCTCCATGCGATCCAGCTGTGAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGGAGCTTCATTTGAGGTAATGCCTCCATGCGATCCAGCTGTGAG  150

seq1  GTATTTTCTCAATTGGTGATCAAGTGAGGCTGATCTCTAGGCTGGTAGTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCTCAATTGGTGATCAAGTGAGGCTGATCTCTAGGCTGGTAGTC  200

seq1  TTGGGTTCTATAAGAAAGCAGGCTGAGCAAGCCAGGAGAAGCAAGCCAGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTCTATAAGAAAGCAGGCTGAGCAAGCCAGGAGAAGCAAGCCAGT  250

seq1  AAGGAACATCCCTCCATGGCCTCTGAATCAGCTCCTGCTTCCTGACCTGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACATCCCTCCATGGCCTCTGAATCAGCTCCTGCTTCCTGACCTGC  300

seq1  TTGAGTTCCAGTCCTGACTTCCTTGGTGGTGAACAGCAGTATAGAAGTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTCCAGTCCTGACTTCCTTGGTGGTGAACAGCAGTATAGAAGTGT  350

seq1  AAGCTGAATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCACAATGTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCACAATGTTT  400

seq1  TGTCCAGGAATAGAAACCCTGAGTAAGACAAGTGCTGAGAAAGAATACTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGGAATAGAAACCCTGAGTAAGACAAGTGCTGAGAAAGAATACTT  450

seq1  CTTAAAGCCCCTTCCTGCGAATGAATGTTAATGCTATATTACCCTTAGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGCCCCTTCCTGCGAATGAATGTTAATGCTATATTACCCTTAGAT  500

seq1  CACTACTTCAGTTGCTGGCAGAATGACCCTTCTTTTTCCTATCACCCCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTTCAGTTGCTGGCAGAATGACCCTTCTTTTTCCTATCACCCCTT  550

seq1  TTTCCTGGTGCCATTTTCTTGGGCCCAAGTTGGAAAGGGAGTTGGGATAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGTGCCATTTTCTTGGGCCCAAGTTGGAAAGGGAGTTGGGATAT  600

seq1  TTCAAATAAGCTTTGTCTATATCTATTGAGATCATCTGATTTTCATCCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATAAGCTTTGTCTATATCTATTGAGATCATCTGATTTTCATCCTT  650

seq1  TTTGAACCTTTTTGATTTTTTTTTTTTTGCATTAGTTTGTGATGTTGCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACCTTTTTGATTTTTTTTTTTTTGCATTAGTTTGTGATGTTGCAC  700

seq1  TATCCTTGAATTACTGGAATATATCTCAGAGTCATGGCATAGAATTTTAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTGAATTACTGGAATATATCTCAGAGTCATGGCATAGAATTTTAG  750

seq1  TATGCACTTGAAGTTTACTTACTTGCATTAATATTTCATGAGGGGATTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACTTGAAGTTTACTTACTTGCATTAATATTTCATGAGGGGATTTT  800

seq1  TCTGTCTGTATTTTGAGAGATTGTCTTCATACTGTACAGGATAATAGTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTATTTTGAGAGATTGTCTTCATACTGTACAGGATAATAGTAG  850

seq1  GTTCAAAGAATTC  861
      |||||||||||||
seq2  GTTCAAAGAATTC  863

seq1: chr6_149125558_149126651
seq2: B6Ng01-141H12.g_66_1134

seq1  GAATTCTGTGGATAAGAAGCCGAGAATCCGTAAACACTTGGTTCTGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGATAAGAAGCCGAGAATCCGTAAACACTTGGTTCTGAACA  50

seq1  CTGATTTAAAGTACAGTGATAAGTGATTTCCCTAAACCTGCAGGCATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTAAAGTACAGTGATAAGTGATTTCCCTAAACCTGCAGGCATCTT  100

seq1  TGATTTAAAGAAAAGTCAAACTTCAGAGGACAAACTATATGAAAATAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAAAGAAAAGTCAAACTTCAGAGGACAAACTATATGAAAATAGAA  150

seq1  TTACCCATGAAGGTACCCTGTAGCAGAAGTAACCATGTTGTAGGAACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCATGAAGGTACCCTGTAGCAGAAGTAACCATGTTGTAGGAACTAG  200

seq1  ATTGGTTTCCTTAAGTTATATATAGCAGAGTTAACTATTTAACTACCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTTCCTTAAGTTATATATAGCAGAGTTAACTATTTAACTACCCTT  250

seq1  TGGTACCAGAGCAGAATTAGTCAGTGATCACTTGACTAGAACTACTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACCAGAGCAGAATTAGTCAGTGATCACTTGACTAGAACTACTTAAT  300

seq1  TAGGTATATGTCTTACTATCCTGCCTTAATTCTTTATCTACTTAAGCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATATGTCTTACTATCCTGCCTTAATTCTTTATCTACTTAAGCCTA  350

seq1  AAGCTTGTGTCGATACCTCAACAATGAATTTAGGATCATCAGACCTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGTGTCGATACCTCAACAATGAATTTAGGATCATCAGACCTCTTC  400

seq1  ACCTGCTCCACTTGCAAATGTACACTGATTTAATCTCTTTTCTTTGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTCCACTTGCAAATGTACACTGATTTAATCTCTTTTCTTTGGTTT  450

seq1  TCATCATTATTCATTTCCTTAGTTGGTAATTTGGTGTGGGTGGCAAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATTATTCATTTCCTTAGTTGGTAATTTGGTGTGGGTGGCAAATTC  500

seq1  TAGATTTCTAGATTTCTAGAGCTGGGTTATTGATCTAGCACTCCAATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTCTAGATTTCTAGAGCTGGGTTATTGATCTAGCACTCCAATTCT  550

seq1  ATTGGGGGTCCTATCCTGGGGAACCATTCTAGAGCCTCCCCTATGTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGGTCCTATCCTGGGGAACCATTCTAGAGCCTCCCCTATGTTTTT  600

seq1  CACGTAGCTGATCATCAGTGTCCTTTATACATACCATTTGCAATTAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTAGCTGATCATCAGTGTCCTTTATACATACCATTTGCAATTAACTA  650

seq1  GTAAACATATGCTGAAGTAACTGAGGTAACACCATCTTGTCTTGATCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACATATGCTGAAGTAACTGAGGTAACACCATCTTGTCTTGATCTTG  700

seq1  ACTCCATTTTGTATCTGTTGAGGTGCTTTTTCACTGCAAACCCACCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACTCCATTTTGTATCTGTTGAGGTGCTTTTTCACTGCAAACTCACCCCTG  750

seq1  ACCATATCCAAAGATGTATAACCAAAATAGCTGCTGAATGTAAAACCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATCCAAAGATGTATAACCAAAATAGCTGCTGAATGTAAAACCAAA  800

seq1  TAACTGTGTTCTGCCAAAACAAATGTTAGAAGGGTCTCCTAACAATGTTA  850
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  TAACTGTGTTCTGCC-AAACAAATGTTAGAA-GGTCTCCTAACAATGTTA  848

seq1  TTGTGATTTTTTAAATTTATAAATGCTGTATTCTTGAACTTTTGGCTGAG  900
      |||||||||||  || |||| |||||||||||||||||||||||||||||
seq2  TTGTGATTTTT--AAATTAT-AATGCTGTATTCTTGAACTTTTGGCTGAG  895

seq1  AACTCTTCATGACAAAAGCCTAC-TCTGGCTTAAATAAAGGACGGTTACT  949
       ||||||||||||  |||||||| |||||||||||| |||||||||||||
seq2  -ACTCTTCATGAC--AAGCCTACTTCTGGCTTAAAT-AAGGACGGTTACT  941

seq1  TAACCTTATATTAGTGATGGTCTGTAACTTTCTCACATGGATTAGAACAA  999
      | ||||||||||||||||||| ||| || |||||||||||| |||||| |
seq2  T-ACCTTATATTAGTGATGGTTTGT-ACCTTCTCACATGGA-TAGAAC-A  987

seq1  AGCAAAGTATAGTTCTGAGTTCTGTGAACCACTGTGAGAAGTTATCAATT  1049
      ||| |||||||||   ||||| |||| ||| ||||||| |||| || |||
seq2  AGC-AAGTATAGTCTGGAGTT-TGTGGACC-CTGTGAG-AGTTTTC-ATT  1032

seq1  TCTAAGGAGTGTTCCAGGATTGAAACCCAAAGACTGGGGCTGGAG  1094
      ||     || ||| |||   ||||||||  |||||||||||||||
seq2  TC-----AGAGTTTCAG--ATGAAACCC-TAGACTGGGGCTGGAG  1069