BAC Information

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BAC

Clone NameB6Ng01-142B15
Chromosome6 (Build37)
Map Location 74,225,066 - 74,226,223
singlet/doubletsinglet
Overlap genenone
Upstream geneSuclg1, Olfr210-ps1, 4931417E11Rik, LOC100043338
Downstream geneEG668132, LOC668136
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142B15.bB6Ng01-142B15.g
ACCDH940384DH940385
length1,1631,172
definitionDH940384|Mus musculus domesticus DNA, BAC clone: B6Ng01-142B15, 5' end.DH940385|Mus musculus domesticus DNA, BAC clone: B6Ng01-142B15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcagagatcacataatggatacccattgggctctttctagcct
gatgtaccagaacacagacatgcaagtctatagatattgtgatattggtt
taggacaaacaaaatttttaaatatttgataaaaataacaattcctttct
atattgaacacacacatcatgtttccttgccatcataccttaaatagtac
agtataaacagtatttctttgacatgtgtattgtataaggcattatagat
gatctacaaatacaaatgttagaaaatatataggcatacatataaagcac
aagtgttaaaagcatcattttatagatcagacttcatcacctgatttgtt
ttacatgtgtggacaagtgggggtggatgtgtaagtcttgcaactgacac
tgtagatttcacataatgtgagttcattgcaaaatttcccacagaaagtg
gtcatattagcctaattggaaaacccagttgaactgataagtttgttccc
atagaagggaagtgatttccaaagatcatcaaagctatgaggaaacagaa
actcattctttattaataatagtatgactgctctaggattttccatgtta
gggataatctttactttggtccttcttcaatcatcatgaatggacaagtt
ttccccatgttaactattctacttacaaagttgcatatattttattttat
tttattttattttattttattttattttaattaggtattttcctcgttta
cattttcaatgctatcccacaggtccaccatacccacccacccccaatcc
cctacccacccactccccctttttggccctggctttcccctgtactgggg
catataaagttggcaagtccaatgggcctctctttgcagtgatggctgac
taggtcatcttttgatacatttgcagctagagacaagagcttcggggtac
tgggttagtccatattgttgttccacttatagggttgcagtttcctttag
ctccttgggtaatttctctagctcttccatgggggcgtggtgacccatcc
aatagccgaccggtgaacatccacttttggtgttggctaggtctcggcat
agtcttcacaaagaagactatactctgggaaccttttcagcaaatctctg
ttagggtatgcaa
gaattctcacctgatgaataccgaatggtagagaagcacctaaaaaaaat
gttcaacatccttaatcatcagggacatgcaaatcaaaacaaccctgaga
ttccacctcacagcagtcagaatggctaagatcaaaacttcaggtgacag
cagatggtggagaggatgtggagaaagaggaacactcctccattgttggt
gagattgcaagcttgtacaaccactctgaaaatcagtctggcggttcctt
agaaaattggacatagtactactggaggatctcgcaatacctctcctggg
catatacccagaagatgtcccaactggtaagaaggccacatgctccatta
tgttcagagcagccttatttataataaccagaagctggaatgaacccaga
tgcccctcaacagaggaatggattcagaaaatatcatacatttacacaat
ggagtactactcagctattaaaaagaatgaattttgaaattcctacgcaa
atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactaataagtcgatattagcccagaaac
ttaggatacccaagatataaggtacaatttgctaaacgcatgaaactcaa
gaagaatgaagaactaagtgtggacactgtgccccttcttagaattggga
acaaaacacctatggaaggagttacagagacaaagtttggagctgtgaca
aaaggatggaccatctagagactgccatatccagggatccaccccataat
cagcttccaaacgctgacacattgcatacactagcaagaatttgctgaaa
ggacccagatgtagctgtctcttgtgagtctatgccgggggctagcaaac
acagaagtgatgctcacagtcagctaatggatggatcacagggctcccat
ggagagctagagaagtcacaagactaaagggatctgcacgctatagtgac
acatttatgactaccagtacccgggactctggctctagctgcatattatc
aagatggcctattttgtcatcacttgcagagaaggccattgaactacaaa
ccttttaatgcccagtacgttacgccagaccaaaaaaaagggaatggtcc
tagggagggctgcgcgtgtcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74225066_74226223
seq2: B6Ng01-142B15.b_46_1208

seq1  GAATTCTTCAGAGATCACATAATGGATACCCATTGGGCTCTTTCTAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAGATCACATAATGGATACCCATTGGGCTCTTTCTAGCCT  50

seq1  GATGTACCAGAACACAGACATGCAAGTCTATAGATATTGTGATATTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTACCAGAACACAGACATGCAAGTCTATAGATATTGTGATATTGGTT  100

seq1  TAGGACAAACAAAATTTTTAAATATTTGATAAAAATAACAATTCCTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAAACAAAATTTTTAAATATTTGATAAAAATAACAATTCCTTTCT  150

seq1  ATATTGAACACACACATCATGTTTCCTTGCCATCATACCTTAAATAGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAACACACACATCATGTTTCCTTGCCATCATACCTTAAATAGTAC  200

seq1  AGTATAAACAGTATTTCTTTGACATGTGTATTGTATAAGGCATTATAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAACAGTATTTCTTTGACATGTGTATTGTATAAGGCATTATAGAT  250

seq1  GATCTACAAATACAAATGTTAGAAAATATATAGGCATACATATAAAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACAAATACAAATGTTAGAAAATATATAGGCATACATATAAAGCAC  300

seq1  AAGTGTTAAAAGCATCATTTTATAGATCAGACTTCATCACCTGATTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTAAAAGCATCATTTTATAGATCAGACTTCATCACCTGATTTGTT  350

seq1  TTACATGTGTGGACAAGTGGGGGTGGATGTGTAAGTCTTGCAACTGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGTGTGGACAAGTGGGGGTGGATGTGTAAGTCTTGCAACTGACAC  400

seq1  TGTAGATTTCACATAATGTGAGTTCATTGCAAAATTTCCCACAGAAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATTTCACATAATGTGAGTTCATTGCAAAATTTCCCACAGAAAGTG  450

seq1  GTCATATTAGCCTAATTGGAAAACCCAGTTGAACTGATAAGTTTGTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATTAGCCTAATTGGAAAACCCAGTTGAACTGATAAGTTTGTTCCC  500

seq1  ATAGAAGGGAAGTGATTTCCAAAGATCATCAAAGCTATGAGGAAACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGGGAAGTGATTTCCAAAGATCATCAAAGCTATGAGGAAACAGAA  550

seq1  ACTCATTCTTTATTAATAATAGTATGACTGCTCTAGGATTTTCCATGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTCTTTATTAATAATAGTATGACTGCTCTAGGATTTTCCATGTTA  600

seq1  GGGATAATCTTTACTTTGGTCCTTCTTCAATCATCATGAATGGACAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAATCTTTACTTTGGTCCTTCTTCAATCATCATGAATGGACAAGTT  650

seq1  TTCCCCATGTTAACTATTCTACTTACAAAGTTGCATATATTTTATTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCATGTTAACTATTCTACTTACAAAGTTGCATATATTTTATTTTAT  700

seq1  TTTATTTTATTTTATTTTATTTTATTTTAATTAGGTATTTTCCTCGTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATTTTATTTTATTTTATTTTAATTAGGTATTTTCCTCGTTTA  750

seq1  CATTTTCAATGCTATCCCACAGGTCCACCATACCCACCCACCCCCAATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAATGCTATCCCACAGGTCCACCATACCCACCCACCCCCAATCC  800

seq1  CCTACCCACCCACTCCCCCTTTTTGGCCCTGGCTTTCCCCTGTACTGGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCACCCACTCCCCCTTTTTGGCCCTGGCTTTCCCCTGTACTGGGG  850

seq1  CATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCTGAC  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAGTTGGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCTGAC  900

seq1  TAGGTCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGGTAC  950
      |||||||||||||||||||| |||||||||||||||||||| ||||||||
seq2  TAGGTCATCTTTTGATACATTTGCAGCTAGAGACAAGAGCTTCGGGGTAC  950

seq1  T-GGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAG  999
      | ||||||| |||||||||||||||| ||||||||||||||| |||||||
seq2  TGGGTTAGTCCATATTGTTGTTCCACTTATAGGGTTGCAGTTTCCTTTAG  1000

seq1  CTCCTTGGGTAATTTCTCTAGCTCTTCCATTGGGGGCCGTGTGACCCATC  1049
      ||||||||||||||||||||||||||||| |||||||   ||||||||||
seq2  CTCCTTGGGTAATTTCTCTAGCTCTTCCA-TGGGGGCGTGGTGACCCATC  1049

seq1  CAATAGCTGA-CTGTGATCATCCACTTCT-GTGTTTGCTAGGTCCCGGCA  1097
      ||||||| || | |||| ||||||||| | ||||| |||||||| |||||
seq2  CAATAGCCGACCGGTGAACATCCACTTTTGGTGTTGGCTAGGTCTCGGCA  1099

seq1  TAGTC-TCACAAGAGAGAGCTATA-TCTGGG--TCCTTTCAGCAAAATCT  1143
      ||||| |||||| |||   ||||| ||||||   | ||||||| ||||||
seq2  TAGTCTTCACAA-AGAAGACTATACTCTGGGAACCTTTTCAGC-AAATCT  1147

seq1  -TGCTAGTGTATGCAA  1158
       || ||| ||||||||
seq2  CTGTTAGGGTATGCAA  1163