MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-142F01
Chromosome	6 (Build37)
Map Location	103,995,775 - 103,996,165
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Chl1, LOC666141, LOC100043345
Downstream gene	Cntn6
Link	Open Mouse BAC browser

Click to get alignment info.

name	Chl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12661 MGI:1098266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666141 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666141
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100043345 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043345
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Cntn6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53870 MGI:1858223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347544 GeneID:12661 MGI:1098266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule with homology to L1CAM transcript_id : NM_007697.2

name	Cntn6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50233919 GeneID:53870 MGI:1858223
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin 6 transcript_id : NM_017383.3

name	Chl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347545 GeneID:12661 MGI:1098266
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007610 - behavior [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0031175 - neurite development [Evidence IDA]; GO:0001764 - neuron migration [Evidence IMP] codon_start : 1 note : close homolog of L1 product : cell adhesion molecule with homology to L1CAM protein_id : NP_031723.2

name	Cntn6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980846 CCDS:CCDS20394.1 GeneID:53870 MGI:1858223
definition	GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007219 - Notch signaling pathway [Evidence IEA] codon_start : 1 note : neural recognition molecule NB-3 product : contactin 6 protein_id : NP_059079.2

name	LOC666141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666141
definition	number : 2 pseudo : _no_value

name	LOC666141 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666141
definition	number : 1 pseudo : _no_value

name	LOC100043345 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043345
definition	number : 2 pseudo : _no_value

name	LOC100043345 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043345
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:130799
definition	standard_name : D6Mit250

name	(CDS detail)
type	STS
link
xref	UniSTS:123646
definition	standard_name : 24.MMHAP4FRH9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:159550
definition	standard_name : AI465420

name	(CDS detail)
type	STS
link
xref	UniSTS:130966
definition	standard_name : D6Mit64

name	(CDS detail)
type	STS
link
xref	UniSTS:125213
definition	standard_name : MHAa54c9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123332
definition	standard_name : 17.MMHAP15FRF8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130649
definition	standard_name : D6Mit106

name	(CDS detail)
type	STS
link
xref	UniSTS:123494
definition	standard_name : 20.MMHAP85FLG2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130911
definition	standard_name : D6Mit36

name	(CDS detail)
type	STS
link
xref	UniSTS:123769
definition	standard_name : 27.MHAa93g3.seq

clone name	MSMg01-424N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154P02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-209C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-329F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052F14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-142F01.b	B6Ng01-142F01.g
ACC	DH940542	DH940543
length	1,040	385
definition	DH940542\|Mus musculus domesticus DNA, BAC clone: B6Ng01-142F01, 5' end.	DH940543\|Mus musculus domesticus DNA, BAC clone: B6Ng01-142F01, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcccaatcgtacagccaagccattgctgttctgtccaggaattttt cccctgtgcccataccttcaaggcttttccccactttttcctctataagt ttcagtgtctctggttttatgtgaagttccttgatccacttagatttgac cttagtacaaggagataggaatggatcgatttgcattcttctacatgata acaaccagttgtgccagcaccatttgttgaaaatgctgactttcttccac tggatggttttagctcccttgttgaagatcaagtgaccataggtgtgtgg gttcatttctgggtcttcaattctattccattggtctacttgtctgtcac tgtaccagtaccatgcagtttttatcataattgctctgtagtaaagcttt aggtcaggcatggtgattccaccagaggttcttttatccttgagaagagt ttttgctatcctaggtttttgaacaaagaattttcacctgaggaataccg aatggcagagaagcacctgaaaacatgttcaacatccttaatcatcaggg aaatgcaaatcaaaacaaccctgagattccacctcacaccagtcagaatg gctaagatcaaaaattcaggtgacagcagatgctggcgaggatgtggaga aagaggaacactcctccattattggtggggattgcaagctttgtacaacc actctggaatcagtctggtggttcctcagaaaattagacatagtactacc agaggatcctgcaatacctctccttggcatatagccagaagatgttccaa ctggtaagaaggacacatgctccattatgttcatagcagccttattttat agtagccagaaactggaaagaacccagatgcccctcaacagaggaatgga tactgaaatgtggtaaatttacacagggagtactactcagctattaaaaa gatgatttatgaatcctagccaatggatggacatggaggcaacatcctga gtgaggtaccactccacaaagacctcctaccaaattgact	ttaagtctctttttccccaactccaagacttttaactacaacaggtatta agaaaagtagaaggaggcagatgaaagacagtgtagggcgggggtggggg agaatcttgcttcatgtcaagcatttcaatagagaaaaaaaatcaaagtg tatcagcctgtggttctgattcttgtttatgataatttaggtacaaactt tggttgcttatattgaaaacccacttctgtttgcatgttaatttgtaggt ccagctgttgttccattgcaggtaactcagtggctgcatttaaatagtag ttttaaataagacgttttcaggtatgcatagttattctcttctaaaataa acattaattatttttcttggacactttcaggagtt
quality values	Open. Hide. 61 42 16 37 53 50 50 35 22 50 47 50 35 50 50 55 38 41 50 43 32 61 55 61 49 38 52 52 55 36 49 49 36 43 43 61 59 59 59 49 43 59 59 61 52 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 59 59 59 59 59 61 52 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 49 61 61 61 61 59 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 59 61 59 61 61 61 61 59 59 61 59 61 61 61 59 59 59 61 59 61 61 61 59 59 59 59 59 59 59 59 59 59 49 59 52 59 61 59 61 59 59 61 59 59 59 59 59 59 59 59 59 59 59 59 59 59 61 61 61 61 61 59 59 59 59 59 59 61 59 59 61 61 61 59 61 59 59 59 50 59 61 59 61 61 52 52 59 35 52 49 61 59 52 61 61 59 59 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 52 59 59 52 43 52 59 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 49 59 59 61 61 61 61 61 61 61 61 59 61 61 61 59 52 61 59 49 59 59 59 49 59 59 59 59 59 61 59 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 52 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 55 55 55 55 55 55 61 55 55 55 55 55 52 61 55 55 61 61 61 61 55 61 61 61 61 61 55 61 61 61 43 55 55 55 49 55 55 47 61 61 61 61 55 61 42 61 61 31 61 55 61 61 55 61 61 55 61 61 61 55 61 61 55 55 61 55 55 55 61 61 61 61 50 43 50 50 43 45 50 52 52 38 23 50 43 50 50 43 47 61 47 50 53 61 61 61 53 53 61 61 61 39 61 61 61 61 61 61 61 29 52 35 43 43 43 32 53 61 61 26 25 19 11 13 17 47 45 61 43 39 35 61 39 39 61 61 42 61 40 61 20 37 53 50 42 45 45 53 30 27 53 52 45 31 61 47 53 53 30 45 42 61 50 40 51 43 39 40 57 43 50 52 35 57 50 45 47 28 32 31 31 53 57 38 53 53 53 36 42 15 52 43 42 53 33 32 36 42 40 45 53 52 38 52 38 38 36 53 53 33 27 40 53 53 21 40 52 32 43 40 50 53 50 36 7 57 24 53 45 25 38 36 50 43 53 34 38 40 45 34 43 35 47 11 26 33 30 32 27 38 35 37 21 5 11 22 26 37 53 57 45 42 31 28 45 42 36 30 18 17 15 9 27 37 17 38 38 31 30 45 35 38 33 39 47 28 40 57 32 36 38 20 40 41 36 42 24 20 32 32 36 29 30 33 37 29 20 27 16 42 34 50 36 8 9 18 50 50 40 50 28 14 17 21 52 16 52 14 42 22 50 53 38 38 23 39 24 38 29 28 32 41 20 19 25 33 37 31 32 31 36 23 35 35 36 37 15 10 4 8 12 10 8 11 14 32 37 14 30 14 12 16 24 24 33 40 30 40 25 15 57 57 14 11 31 25 25 13 26 15 24 32 21 12 28 27 15 21 17 23 30 15 37 45 18 35 40 24 37 37 25 14 30 10 15 27 30 24 32 30 32 11 23 32 28 5 25 25 20 48 24 20 34 20 11 24 15 9 4 8 19 20 31 14 15 16 31 30 24 25 29 33 39 46 38 14 31 8 14 20 7 39 33 32 28 25 15 30 20 12 12 7 7 13 20 28 29 13 46 13 22 36 46 31 34 12 37 32 38 43 25 36 23 11 16 14 51 41 51 12 11 10 13 21 11 11 29 27 14 15 15 33 13 14 17 21 19 12 13 18 23 10 14 39 8 5 5 7 7 22 28 33 20 23 14 8 23 20 19 9 33 10 11 10 10 8 5 14 6 9 6 9 32 46 22 32 12 8 6 22 15 8 8 8 12 6 11 5 7 10 9 8 5 13 7	Open. Hide. 49 30 26 26 23 49 37 35 36 44 59 59 44 61 61 61 61 61 44 59 61 59 61 59 43 59 59 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 59 59 61 61 55 44 43 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 55 61 61 59 61 61 61 61 59 55 37 55 59 61 61 59 61 61 61 61 61 59 61 61 61 61 59 34 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 55 59 61 61 59 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 59 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 59 59 61 61 59 59 59 61 59 59 61 61 61 61 61 61 59 61 61 61 61 59 61 59 59 59 59 59 52 59 61 59 59 61 61 59 61 61 61 59 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 52 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 52 55 52 55 55 61 61 55 61 55 55 55 55 55 61 52 61 55 52 55 55 61 61 55 55 55 61 61 50 19 19

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_103995775_103996165
seq2: B6Ng01-142F01.g_65_455 (reverse)

seq1  AACTCCTGAAAGTGTCCAAGAAAAATAATTAATGTTTATTTTAGAAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTGAAAGTGTCCAAGAAAAATAATTAATGTTTATTTTAGAAGAGA  50

seq1  ATAACTATGCATACCTGAAAACGTCTTATTTAAAACTACTATTTAAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTATGCATACCTGAAAACGTCTTATTTAAAACTACTATTTAAATGC  100

seq1  AGCCACTGAGTTACCTGCAATGGAACAACAGCTGGACCTACAAATTAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTGAGTTACCTGCAATGGAACAACAGCTGGACCTACAAATTAACA  150

seq1  TGCAAACAGAAGTGGGTTTTCAATATAAGCAACCAAAGTTTGTACCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACAGAAGTGGGTTTTCAATATAAGCAACCAAAGTTTGTACCTAAA  200

seq1  TTATCATAAACAAGAATCAGAACCACAGGCTGATACACTTTGATTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATAAACAAGAATCAGAACCACAGGCTGATACACTTTGATTTTTTT  250

seq1  TCTCTATTGAAATGCTTGACATGAAGCAAGATTCTCCCCCACCCCCGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATTGAAATGCTTGACATGAAGCAAGATTCTCCCCCACCCCCGCCC  300

seq1  TACACTGTCTTTCATCTGCCTCCTTCTACTTTTCTTAATACCTGTTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGTCTTTCATCTGCCTCCTTCTACTTTTCTTAATACCTGTTGTAG  350

seq1  TTAAAAGTCTTGGAGTTGGGGAAAAAGAGACTTAAGAATTC  391
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTCTTGGAGTTGGGGAAAAAGAGACTTAAGAATTC  391

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information