BAC Information

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BAC

Clone NameB6Ng01-143B06
Chromosome6 (Build37)
Map Location 132,100,901 - 132,101,451
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600
Downstream genePrb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143B06.bB6Ng01-143B06.g
ACCDH941112DH941113
length9211,186
definitionDH941112|Mus musculus domesticus DNA, BAC clone: B6Ng01-143B06, 5' end.DH941113|Mus musculus domesticus DNA, BAC clone: B6Ng01-143B06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtttctggtttgttgaggtttctgtgtaagcctatgcatgca
atttttttattacatattttcctcaattacatttccaatgctacatagtc
tcttaaagcgagaatatcttagacaattatgaggctgactcaaaaaaaaa
aaaaaaaaaaaaacacatataccagcccatgttattataccaaacaagac
tctcaatcacctcgatggagaaatcaacatattccaagtcaaaagcaatt
taaacaatagcttttcactaaaaaagccctacagaggataataaaagaaa
aactctgaaaaaaaattaaaagagggaatcttctctccaccatgatcaag
aaattaatctttgcacaacaaacccaagaaaataggaccatacaaatata
attcttcctctaacaacaaaaatatcgtgaagcaacaatcattagttttt
aatatctcacaacatccatggattcaaatccctaataaaaagacacagcc
aaaggcacttaataaggaaaaaaaaaaagacccagaattttttctgcata
cagaaaacacactttagtattaaatatagacactacctcagggtcaaagg
ctgaaaatgattccaagaaaataatcacgaaaaataagctgtagtagaca
ttgtaatagccaataaaatggactttcaaccaaaagttagcaaataaatt
ctcatactcaaaaaaggaaaaatctaagaagacaaaattaattctgaata
cctatgcctcaaatgcaagggcacccatatccataaaagaaactttacta
aagctcaaaatataccttcaacctcccacaaaaaattgtgagagacttca
atatccaactctcactaatggacaaatcaggaaaacgaaactaaacagag
acaccttttaccttaaaataa
gaattctggacgtaattcaagacagtctatcagaggtaaagtggggagag
agagtaggagcaaagaggaaacatggtgcaccaattaagcatacaggtct
ttccacaggtcttgaacccaaggaaaagttaacgtcagggaagaatacct
ggggagagattggaaggaaggagaaggaaaaagaaaagaaaaaagatcaa
tcagcggaggtttctaggagaaggaacttatacccgccactagatgagtt
taagaggctagctcttagtagctcagattcagatgaaggacttagctcct
ctgaagaaactgacttggaggaggaagcagtttgttataagggagaaagg
tagcagcaagataaaaggcgagctactcagtccagaaaaaggcaaaaagt
ggctggcaaaagccagcttgttgctcggcctctggactgtcggcttcagg
gtcctagtgcaccttagccctatgtgcagaggtaccattcagagccttat
gtgcagaggtatcattcagattcattcattccaaaagaggaacagagaaa
agtgcagcaagcgttcccagtttttgaaggagctgagggagggcatgttc
acgctccagtagagtatatacagactaaggagcttgcagaaccagtccgc
aattatggagtcagcgctaatttcactatagcacaagtcgaaaggcttgc
gaatcacgctatgactcctggtgattggcagactgtagtaaaatctgcag
cccccagtatgggaatgtatcttgagtggaaagccttgtggcaggactcc
tgccagacacaggcaagggccaatgccaccatggaaggggaccaaagaac
atggacgactgaattgcttacaggtcaggacagcatgctgctaaccaaac
agatatcattggggagcatagctcagatctcagctgccactttaagcatg
aagcactctctaagaggaagagcaagtgggcatttgaccagattactcaa
gttgcacaggagtcttcctcagactttgtggcagatgacggagcagcagg
gagatattaggaaaccaaagcaccatgcctttaatgaaacattggtttat
gaacaactcacggaagtgcgaataagcaaataccctagaaaggatgtagg
ttccggactggtttaaggtgctctgagcgtgagtcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132100901_132101451
seq2: B6Ng01-143B06.b_46_596 (reverse)

seq1  GTATGCAGAAAAAATTCTGGGTCTTTTTTTTTTTCCTTATTAAGTGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAGAAAAAATTCTGGGTCTTTTTTTTTTTCCTTATTAAGTGCCTT  50

seq1  TGGCTGTGTCTTTTTATTAGGGATTTGAATCCATGGATGTTGTGAGATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGTCTTTTTATTAGGGATTTGAATCCATGGATGTTGTGAGATAT  100

seq1  TAAAAACTAATGATTGTTGCTTCACGATATTTTTGTTGTTAGAGGAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTAATGATTGTTGCTTCACGATATTTTTGTTGTTAGAGGAAGAA  150

seq1  TTATATTTGTATGGTCCTATTTTCTTGGGTTTGTTGTGCAAAGATTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTGTATGGTCCTATTTTCTTGGGTTTGTTGTGCAAAGATTAATT  200

seq1  TCTTGATCATGGTGGAGAGAAGATTCCCTCTTTTAATTTTTTTTCAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATCATGGTGGAGAGAAGATTCCCTCTTTTAATTTTTTTTCAGAGT  250

seq1  TTTTCTTTTATTATCCTCTGTAGGGCTTTTTTAGTGAAAAGCTATTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTATTATCCTCTGTAGGGCTTTTTTAGTGAAAAGCTATTGTTT  300

seq1  AAATTGCTTTTGACTTGGAATATGTTGATTTCTCCATCGAGGTGATTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTTTTGACTTGGAATATGTTGATTTCTCCATCGAGGTGATTGAG  350

seq1  AGTCTTGTTTGGTATAATAACATGGGCTGGTATATGTGTTTTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGTTTGGTATAATAACATGGGCTGGTATATGTGTTTTTTTTTTTT  400

seq1  TTTTTTTTTTGAGTCAGCCTCATAATTGTCTAAGATATTCTCGCTTTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGAGTCAGCCTCATAATTGTCTAAGATATTCTCGCTTTAAG  450

seq1  AGACTATGTAGCATTGGAAATGTAATTGAGGAAAATATGTAATAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGTAGCATTGGAAATGTAATTGAGGAAAATATGTAATAAAAAAA  500

seq1  TTGCATGCATAGGCTTACACAGAAACCTCAACAAACCAGAAACTTGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGCATAGGCTTACACAGAAACCTCAACAAACCAGAAACTTGAATT  550

seq1  C  551
      |
seq2  C  551