BAC Information

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BAC

Clone NameB6Ng01-145L19
Chromosome6 (Build37)
Map Location 134,275,904 - 134,414,892
singlet/doubletdoublet
Overlap geneBcl2l14, Lrp6
Upstream geneEG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6, LOC100043660
Downstream geneMansc1, Loh12cr1, LOC100043884, Dusp16, Crebl2, Gpr19, Cdkn1b, 1190002F15Rik, Apold1, Ddx47, Gprc5a, Gprc5d, LOC100043668, Hebp1, 8430419L09Rik, Gsg1, Pbp2, LOC100043890, Emp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145L19.bB6Ng01-145L19.g
ACCDH943060DH943061
length1,2151,039
definitionDH943060|Mus musculus domesticus DNA, BAC clone: B6Ng01-145L19, 5' end.DH943061|Mus musculus domesticus DNA, BAC clone: B6Ng01-145L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,413,663 - 134,414,892)(134,275,904 - 134,276,951)
sequence
gaattcaaaatggattctgctaaaaagaaattgaatcctgctatcccaag
ttctttgttacatttcataactagaaaattctacatggattgggattaac
tcctagttgcacatgtctggtcttgcacccttttctgctacatttaagtc
ttatggggaagcgcttggatttcccttacttctaggatctacctggtatt
catgggataactgctgaaagtgggatttgggcacacaaatcattgctgtt
aaatactttccttttctaaggtgccaacaggatcgtgctagaagactcta
atatattacagcctgtgggcctgaccgtgtttgaaaactggctctattgg
attgataaacagcagcagatgattgaaaaaattgacatgactggtcgaga
aggaagaaccaaggtccaggctcgaattgctcagctgagtgacatccatg
cagtaaaggagctgaaccttcaggagtacagtaagtgaagtggacagtga
gtgcccagggctgctgtgctgtaagaaacaagacatggcttcatggtttc
aaccgttttcttcgttatttgtttttatatttagaaaaacattgtgttga
agtgttaaatcgagtgtgatttgagtttttcaaaattatcatgaagacag
gtaaagaagtatagtcctgcaatcttagcactagggtgaaggcaggaaga
ttgtgagttagacatagtctcagtaaaacctagccctgggatgtagctca
gtggtaaagcactggctttgcatccacaaggcctgggtttgatctttagt
ctaagtagataaatgagtagtagtgtatacttgaacgactgagaaccacc
tttgttgatacatactcaagtataataagtagtatccattttgggtaatc
tactcctttgtagatagttgaccatctcaatatcaacacagattgatgta
gcacccatattatgaaagaaaacagatcatagtaacggctatattgcata
tgatactgatactgtaatagcaagatcagatgctgtaacacagctaaata
gaaaacctcagagcagtggacttgtaagtactgaccttgtgagttgtaag
cgtgacatttgagagtgctgaatgctggtcttttaacttctctcaataaa
ggactttagcctttgataacttagctacctctcggcaatgaaccagacag
cgttttgtctttctc
gaattctatcctgatggtggcaccaatactaagcctggtgttgtaaactg
aaaaatgcaaagatgggaatttaggatgagagcaagcttagcatctcagc
cttggctctatgatcttcaccataagatgtctgtaacgatgtggagggga
gctccctgcagggatgattcctctcaggactactggaggccaggccaagg
cagcctgcaagagaaacaggaaggtccaccaacaaacaaaagggagaagg
aaacttctaggctccagctccgagcatcctactgagatgcgctttatctt
tgggggaaactctgctgaaggaagtgtgagctgaatgaaataaaaagaga
gagaggcaagagggtaggttgggtcatcttgacaaggatctaatctctgg
gtcacgtgaattgctaggagctctgacaccagcactagtcacagtttcat
ggcccagcatctgggaagtgagatcatcaaagcatcttgtagacgcttac
cttttaatccccactgtatttttcagtgcactagagtcttcctaagctct
ttgcgcggatgtgttagtccggtttctagtgtggcataatagcacaagca
aaagcaacttggagaggagttcattgcagcttacaacttagaggtcacgc
tccatcactgagggaggtcagggcaggaacctgaaggcaggaactgaagc
agaggctgtagaggagtgcagcttactggctttctccccactgcttcggc
agccttgtttcttgtacaacccaggaccacttgcctaggtatcttagtta
gggttacttttgctacctgaaaaaatgttcaacatccttaatcatcaggg
aaatgcaaatcaaaacaacactgagattccacctcacaccagtcagaatg
tctaagaatcaaaattcagtgacagcagatgctggcgagatgtgagaaga
gaacactcctccatgtggtgggattgcagcttgtacaccactcctggaaa
tccgtctggcgattctcagaaaattgacataagtactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_134413663_134414892
seq2: B6Ng01-145L19.b_46_1260 (reverse)

seq1  GAGAAAGACAAAACTGCTTGCTTGTTCAATTGCCGA-AGGTAGCATAAAG  49
      |||||||||||||| |||  || |||| |||||||| ||||||| |||  
seq2  GAGAAAGACAAAAC-GCTGTCTGGTTC-ATTGCCGAGAGGTAGC-TAAGT  47

seq1  TATTACAAAGGCCTAAGTTCCTCTTATTGGGTGAAGCTAAAAAGACAAGC  99
      |||  |||||| ||||  |||| |||||| | |||| | ||||||| || 
seq2  TAT--CAAAGG-CTAAAGTCCT-TTATTGAGAGAAG-TTAAAAGACCAG-  91

seq1  CATTCAGCAACTCTTCAATGTCAGCTTTACAACTCAACAATGTCAGTACT  149
      |||||||| |||||  |||||||   ||||||||| |||| |||||||||
seq2  CATTCAGC-ACTCTCAAATGTCACGCTTACAACTC-ACAAGGTCAGTACT  139

seq1  TACAAAGTCACTGCTCTGA-GTTTTCTATTTAGCTTGTGTTACAAGCAAT  198
      |||||   ||||||||||| |||||||||||||| |||||||| ||| ||
seq2  TACAAGTCCACTGCTCTGAGGTTTTCTATTTAGC-TGTGTTAC-AGC-AT  186

seq1  CTGATCTTTGCTATTACAGTATCAGTATCATTATGCAATATAGCCGTTAC  248
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGATC-TTGCTATTACAGTATCAGTATCA-TATGCAATATAGCCGTTAC  234

seq1  TTATGATCTGTTTTCTATCATAATATGGGTGCTACATCAATCTGTGTTGA  298
       ||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  -TATGATCTGTTTTCTTTCATAATATGGGTGCTACATCAATCTGTGTTGA  283

seq1  TATTGAGATGGTCAACTATCTACAAAGGAGTAGATTACCCAAAATGGATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGATGGTCAACTATCTACAAAGGAGTAGATTACCCAAAATGGATA  333

seq1  CTACTTATTATACTTGAGTATGTATCAACAAAGGTGGTTCTCAGTCGTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTATTATACTTGAGTATGTATCAACAAAGGTGGTTCTCAGTCGTTC  383

seq1  AAGTATACACTACTACTCATTTATCTACTTAGACTAAAGATCAAACCCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATACACTACTACTCATTTATCTACTTAGACTAAAGATCAAACCCAG  433

seq1  GCCTTGTGGATGCAAAGCCAGTGCTTTACCACTGAGCTACATCCCAGGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTGGATGCAAAGCCAGTGCTTTACCACTGAGCTACATCCCAGGGC  483

seq1  TAGGTTTTACTGAGACTATGTCTAACTCACAATCTTCCTGCCTTCACCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTTACTGAGACTATGTCTAACTCACAATCTTCCTGCCTTCACCCT  533

seq1  AGTGCTAAGATTGCAGGACTATACTTCTTTACCTGTCTTCATGATAATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAAGATTGCAGGACTATACTTCTTTACCTGTCTTCATGATAATTT  583

seq1  TGAAAAACTCAAATCACACTCGATTTAACACTTCAACACAATGTTTTTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACTCAAATCACACTCGATTTAACACTTCAACACAATGTTTTTCT  633

seq1  AAATATAAAAACAAATAACGAAGAAAACGGTTGAAACCATGAAGCCATGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAAAACAAATAACGAAGAAAACGGTTGAAACCATGAAGCCATGT  683

seq1  CTTGTTTCTTACAGCACAGCAGCCCTGGGCACTCACTGTCCACTTCACTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTCTTACAGCACAGCAGCCCTGGGCACTCACTGTCCACTTCACTT  733

seq1  ACTGTACTCCTGAAGGTTCAGCTCCTTTACTGCATGGATGTCACTCAGCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACTCCTGAAGGTTCAGCTCCTTTACTGCATGGATGTCACTCAGCT  783

seq1  GAGCAATTCGAGCCTGGACCTTGGTTCTTCCTTCTCGACCAGTCATGTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATTCGAGCCTGGACCTTGGTTCTTCCTTCTCGACCAGTCATGTCA  833

seq1  ATTTTTTCAATCATCTGCTGCTGTTTATCAATCCAATAGAGCCAGTTTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCAATCATCTGCTGCTGTTTATCAATCCAATAGAGCCAGTTTTC  883

seq1  AAACACGGTCAGGCCCACAGGCTGTAATATATTAGAGTCTTCTAGCACGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACGGTCAGGCCCACAGGCTGTAATATATTAGAGTCTTCTAGCACGA  933

seq1  TCCTGTTGGCACCTTAGAAAAGGAAAGTATTTAACAGCAATGATTTGTGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTGGCACCTTAGAAAAGGAAAGTATTTAACAGCAATGATTTGTGT  983

seq1  GCCCAAATCCCACTTTCAGCAGTTATCCCATGAATACCAGGTAGATCCTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAATCCCACTTTCAGCAGTTATCCCATGAATACCAGGTAGATCCTA  1033

seq1  GAAGTAAGGGAAATCCAAGCGCTTCCCCATAAGACTTAAATGTAGCAGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAGGGAAATCCAAGCGCTTCCCCATAAGACTTAAATGTAGCAGAA  1083

seq1  AAGGGTGCAAGACCAGACATGTGCAACTAGGAGTTAATCCCAATCCATGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGCAAGACCAGACATGTGCAACTAGGAGTTAATCCCAATCCATGT  1133

seq1  AGAATTTTCTAGTTATGAAATGTAACAAAGAACTTGGGATAGCAGGATTC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTCTAGTTATGAAATGTAACAAAGAACTTGGGATAGCAGGATTC  1183

seq1  AATTTCTTTTTAGCAGAATCCATTTTGAATTC  1230
      ||||||||||||||||||||||||||||||||
seq2  AATTTCTTTTTAGCAGAATCCATTTTGAATTC  1215

seq1: chr6_134275904_134276951
seq2: B6Ng01-145L19.g_67_1105

seq1  GAATTCTATCCTGATGGTGGCACCAATACTAAGCCTGGTGTTGTAAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCTGATGGTGGCACCAATACTAAGCCTGGTGTTGTAAACTG  50

seq1  AAAAATGCAAAGATGGGAATTTAGGATGAGAGCAAGCTTAGCATCTCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCAAAGATGGGAATTTAGGATGAGAGCAAGCTTAGCATCTCAGC  100

seq1  CTTGGCTCTATGATCTTCACCATAAGATGTCTGTAACGATGTGGAGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCTATGATCTTCACCATAAGATGTCTGTAACGATGTGGAGGGGA  150

seq1  GCTCCCTGCAGGGATGATTCCTCTCAGGACTACTGGAGGCCAGGCCAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTGCAGGGATGATTCCTCTCAGGACTACTGGAGGCCAGGCCAAGG  200

seq1  CAGCCTGCAAGAGAAACAGGAAGGTCCACCAACAAACAAAAGGGAGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGCAAGAGAAACAGGAAGGTCCACCAACAAACAAAAGGGAGAAGG  250

seq1  AAACTTCTAGGCTCCAGCTCCGAGCATCCTACTGAGATGCGCTTTATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTAGGCTCCAGCTCCGAGCATCCTACTGAGATGCGCTTTATCTT  300

seq1  TGGGGGAAACTCTGCTGAAGGAAGTGTGAGCTGAATGAAATAAAAAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAAACTCTGCTGAAGGAAGTGTGAGCTGAATGAAATAAAAAGAGA  350

seq1  GAGAGGCAAGAGGGTAGGTTGGGTCATCTTGACAAGGATCTAATCTCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAAGAGGGTAGGTTGGGTCATCTTGACAAGGATCTAATCTCTGG  400

seq1  GTCACGTGAATTGCTAGGAGCTCTGACACCAGCACTAGTCACAGTTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACGTGAATTGCTAGGAGCTCTGACACCAGCACTAGTCACAGTTTCAT  450

seq1  GGCCCAGCATCTGGGAAGTGAGATCATCAAAGCATCTTGTAGACGCTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGCATCTGGGAAGTGAGATCATCAAAGCATCTTGTAGACGCTTAC  500

seq1  CTTTTAATCCCCACTGTATTTTTCAGTGCACTAGAGTCTTCCTAAGCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATCCCCACTGTATTTTTCAGTGCACTAGAGTCTTCCTAAGCTCT  550

seq1  TTGCGCGGATGTGTTAGTCCGGTTTCTAGTGTGGCATAATAGCACAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGCGGATGTGTTAGTCCGGTTTCTAGTGTGGCATAATAGCACAAGCA  600

seq1  AAAGCAACTTGGAGAGGAGTTCATTGCAGCTTACAACTTAGAGGTCACGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACTTGGAGAGGAGTTCATTGCAGCTTACAACTTAGAGGTCACGC  650

seq1  TCCATCACTGAGGGAGGTCAGGGCAGGAACCTGAAGGCAGGAACTGAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCACTGAGGGAGGTCAGGGCAGGAACCTGAAGGCAGGAACTGAAGC  700

seq1  AGAGGCTGTAGAGGAGTGCAGCTTACTGGCTTTCTCCCCACTGCTTCGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGTAGAGGAGTGCAGCTTACTGGCTTTCTCCCCACTGCTTCGGC  750

seq1  AGCCTTGTTTCTTGTACAACCCAGGACCACTTGCCTAGGTATCTTAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGTTTCTTGTACAACCCAGGACCACTTGCCTAGGTATCTTAGTTA  800

seq1  GGGTTACTTTTGCTACCTGAAAAAATGTTCAACATCCTTAATCATCAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACTTTTGCTACCTGAAAAAATGTTCAACATCCTTAATCATCAGGG  850

seq1  AAATGCAAATCAAAACAACACTGAGATTCCACCTCACACCAGTCAGAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAAATCAAAACAACACTGAGATTCCACCTCACACCAGTCAGAATG  900

seq1  TCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGA  950
      |||||||   |||||||| |||||||||||||||||||| ||||| ||| 
seq2  TCTAAGAATCAAAATTCA-GTGACAGCAGATGCTGGCGA-GATGT-GAG-  946

seq1  AAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCAC  1000
      |||| ||||||||||||||   ||||||||||||| |||||||| |||||
seq2  AAGA-GAACACTCCTCCAT--GTGGTGGGATTGCA-GCTTGTAC-ACCAC  991

seq1  T-CTGGAAATCCGTCTGGCGGTTCCTCAGAAAATTGGACAT-AGTACTAC  1048
      | |||||||||||||||||| || ||||||||||| ||||| ||||||||
seq2  TCCTGGAAATCCGTCTGGCGATT-CTCAGAAAATT-GACATAAGTACTAC  1039