BAC Information

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BAC

Clone NameB6Ng01-146L12
Chromosome6 (Build37)
Map Location 67,861,770 - 67,862,278
singlet/doubletsinglet
Overlap geneIgk
Upstream gene4930597O21Rik, Gng12, LOC100042837, Gadd45a, E230016M11Rik, EG667310, LOC667318, Serbp1, Il12rb2, LOC667324, EG667326, LOC672137, EG209589, LOC100042890, Il23r, Tacstd2, Igkv2-137, 4930515G16Rik, Igkv1-136, Igkv1-135, LOC723992, EG628006, Igkv14-134-1, Igkv17-134, EG628027, LOC384401, EG628042, EG243423, EG628056, EG628072, Igkv9-129, Igkv9-128, EG243433, Igkv14-126-1, LOC723993, EG628127
Downstream geneENSMUSG00000050218, EG243431, EG628144, Igkv1-122, EG667435, EG434025, Igkv9-119, Igkv14-118-2, Igkv14-118-1, EG384405, Igkv11-118, Igkv1-117, EG434026, EG628206, Igkv11-114, Igkv2-113, LOC232047, EG381776, Igkv14-111, Igkv1-110, Igkv2-109, Igkv1-108, Igkv2-107, Igkv11-106, Igkv2-105, LOC384408, Gm1067, Igkv15-103, Igkv15-102, Igkv20-101-2, Igkv15-101-1, Igkv15-101, Igkv14-100, Igkv1-99, Igkv12-98, Igkv15-97, Igkv10-96, Igkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146L12.bB6Ng01-146L12.g
ACCDH943785DH943786
length5031,212
definitionDH943785|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L12, 5' end.DH943786|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctccatgtgtactcttaggttgatggttcagtccctgggagctctgggag
gtgggtctggttggttgatattgttggtttttctatgagattgcaaaccc
cttcagctctttcattcctttctctaactcctctgttgtggatcccatta
cctcaattcccagtaaccatgtggtggctcacaatcttctctaatgatat
ctgatgccttcctctggtgtgtctgatgatagtgaaagtgtactcacata
cattaaaaaaaaaagttttctttttatactgacaagtgagactctccata
gtggtaaagtatgatctcttataatccttgaattttgagagttatttttg
ctttgttttgttacattttgttttgttttatttgacaattgtgacattat
gatagtggtgaagctcatatgctaacagaagggaaagtaaaacagataag
gaagatacataatgatgtgttaataagaaattattttctactccatgaat
gct
gaattcaacaccccactctcagcaattgacaaattatggaaacaggaact
aagcagagacactgtgaaacaaacagaatttatgaaacaaatgaaattaa
cagatatttgtatcatttcttctttaagcaaaagaatataccttcttctt
agcacctcatggtaccttctccaaaactgaccatataattggtcataaaa
caggcttcaacagatatcagaagattgaaataatgccatgcaccctatca
gatcaccacagactagggctggtcttcaataacaacaaaaataatagaaa
gcccacatacacctggaagctgagaaatgctctactcgatgataacttat
tcaaggaagaaataaaaaaagaaattagacttttatttttagaatttaat
gaaaatgaaggtatatcatacccaaactatgggtcacaatgaaagcagca
ctaagaggaaaccccatagctctgagttcctctaaaaagaaactggagag
agcacacactagcagcttgacagcacacctgagagctgtagaacaaaaag
aagcaaattcacccaagaggaatagatggcaggaaataatcaaactcaag
gctgaaatgaaccaagtagaaagaaaagaactatacaaagaatcaaccaa
accagtagctgtttttttgttttgttttgttttgttttgtttttgagaaa
atcaacaagatagataagcccttaaccagactaacaagatgacatacagt
atccaaattaacaaaatcaaaaatgaaaagggaaatataacaaaagaaac
tgtcaagaatcaaaaacttatcagattctactacaaaagccttactaaac
gaaactagaaaacctggacgaatggacaattttgtagactcatgccaggt
gccaaagttaaatcaggatcagataacaatctaaatagtcccataacctc
taaagaaatacagtcatctttaaaagtctccacaaaaaagcccagacaga
tggttttagtgcagaattctgagttctccaagactatacatagtctcaac
tatttcacaatagacgagacaccacccatttgttctaggatcccattatg
ctgatccaaacaaccaagacctacaagaagaaactcggacattcctttat
agttcatgcagatctatagtctcaatcgaatcagaaccactcaaatcttt
ctccccaatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_67861770_67862278
seq2: B6Ng01-146L12.b_47_555 (reverse)

seq1  AGCATTCATGGAGTAGAAAATAATTTCTTATTAACACATCATTATGTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCATGGAGTAGAAAATAATTTCTTATTAACACATCATTATGTATC  50

seq1  TTCCTTATCTGTTTTACTTTCCCTTCTGTTAGCATATGAGCTTCACCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATCTGTTTTACTTTCCCTTCTGTTAGCATATGAGCTTCACCACT  100

seq1  ATCATAATGTCACAATTGTCAAATAAAACAAAACAAAATGTAACAAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATGTCACAATTGTCAAATAAAACAAAACAAAATGTAACAAAACA  150

seq1  AAGCAAAAATAACTCTCAAAATTCAAGGATTATAAGAGATCATACTTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAATAACTCTCAAAATTCAAGGATTATAAGAGATCATACTTTAC  200

seq1  CACTATGGAGAGTCTCACTTGTCAGTATAAAAAGAAAACTTTTTTTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGGAGAGTCTCACTTGTCAGTATAAAAAGAAAACTTTTTTTTTTA  250

seq1  ATGTATGTGAGTACACTTTCACTATCATCAGACACACCAGAGGAAGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTGAGTACACTTTCACTATCATCAGACACACCAGAGGAAGGCAT  300

seq1  CAGATATCATTAGAGAAGATTGTGAGCCACCACATGGTTACTGGGAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATCATTAGAGAAGATTGTGAGCCACCACATGGTTACTGGGAATTG  350

seq1  AGGTAATGGGATCCACAACAGAGGAGTTAGAGAAAGGAATGAAAGAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATGGGATCCACAACAGAGGAGTTAGAGAAAGGAATGAAAGAGCTG  400

seq1  AAGGGGTTTGCAATCTCATAGAAAAACCAACAATATCAACCAACCAGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTTTGCAATCTCATAGAAAAACCAACAATATCAACCAACCAGACC  450

seq1  CACCTCCCAGAGCTCCCAGGGACTGAACCATCAACCTAAGAGTACACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCAGAGCTCCCAGGGACTGAACCATCAACCTAAGAGTACACATG  500

seq1  GAGGAATTC  509
      |||||||||
seq2  GAGGAATTC  509