BAC Information

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BAC

Clone NameB6Ng01-147I22
Chromosome6 (Build37)
Map Location 18,835,442 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147I22.bB6Ng01-147I22.g
ACCDH944405DH944406
length9831,185
definitionDH944405|Mus musculus domesticus DNA, BAC clone: B6Ng01-147I22, 5' end.DH944406|Mus musculus domesticus DNA, BAC clone: B6Ng01-147I22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgacctcagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccagttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcatttaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcactttcttagttagagtcacgccaagatattttatattat
tttgtgactatgagaggggtgttgtttccctaa

gaattcctagccagagcaattcgacaacaaaaggatatcaaggggataca
aattggaaaggatgaagtcaaaatatcactatttgaagatatatgatagc
atatatatgtgaccctaaaaattccaccagagaacttctaaacctgataa
acagctttaatggagtagctggatataaaattaactcaaacatattagtg
aactttttatacacaaaggataaagaggctgagaaagaaattagagaaac
aacacccttcacaatagtcacaaataatataaaatagctaggtgtgattc
taactaaggagtgaaagatctttatgataagacttcaagtctctgaagaa
agaaatcaaagaagatctcagaagatggaaagatctcccatgctcatgga
ttggcaggatcaatatagtaaaaatgactatcttgccgaaagcaatctac
agattcaatgcaatccccataaaaattccaactcaattcttcactgagtt
agcaaggacaatttgcaaattcatctggaaaaacaaaaatcctaggatag
caaaaactattctcaacaataaaagaacctctggtggaatcaccatacct
gatctcaagctgtactacagagcaattgtgataaaaactgcatggtactg
gtacaacgacaaacaggtagatcgatgaaatagtattgaagactcagaaa
tgaacccacacacctgtggtcacttgatctttgacaacggagctaaaacc
acccagtggtaaaaagacagcattttcaacaaatggtgctggctttactg
gcggttatcatgtagaagaatgtaaattgacccattcttatctccttgta
caaagctcaagtctgactggatcaaggaattccacataaaactagagatt
ctgaaacttatagaggagaaaatgaggaagagctttgaagacataggaac
aggggaaaaattcttgacagaatagcaatggctgtgctgtaagatcaaga
attgacaaatatgaccttataaattgcaagcttctgtaaggcaaagaacc
ctgtcataagacaatattgcgccacattttggggaaaggacctaaccaat
cctaaatctgataggacatatccatatataatgcccccattagttaagta
attatctactcatactactgtagtactatatggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-147I22.b_52_579 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAACTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTGAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      |||||||||||| |||||||||||||||
seq2  ATGGGGCTCAGAGCTGAACAAAGAATTC  528


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