BAC Information

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BAC

Clone NameB6Ng01-147L20
Chromosome6 (Build37)
Map Location 69,589,389 - 69,589,880
singlet/doubletsinglet
Overlap geneIgk
Upstream geneIgkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459, Igkv13-85, Igkv13-84, Igkv4-83, Igkv13-82, Gm460, Igkv13-80-1, Igkv4-80, Gm194, EG628498, Igkv4-78, EG667621, Igkv13-76, Igkv4-75, Igkv13-74-1, LOC236047, Igkv13-73-1, EG628516, Gm1499, Igkv13-71-1, Igkv4-71, Gm1502, EG628541, Gm1419, Igkv12-67, Igkv12-66, Igkv4-65, Igkv13-64, EG628571, Igkv13-62-1, EG636752, Igkv13-61-1, Igkv4-61, EG667683, Igkv4-60, Gm1077, Igkv13-57-2, Gm1418, Igkv13-57-1, Gm189, Igkv13-56-1, Igkv4-56, Igkv13-55-1, Gm1524, Igkv13-54-1, Igkv4-54
Downstream geneGm1420, Igkv4-51, Gm1069, Igkv12-49, Igkv5-48, ENSMUSG00000029975, Igkv12-46, Igkv5-45, Igkv12-44, Igkv5-43, Igkv12-42, Igkv12-41, Igkv5-40-1, Igkv12-40, Gm1409, Igkv12-38, Gm1410, Igkv18-36, Igkv1-35, Igkv8-34, U29423, ENSMUSG00000053690, Igkv8-31, Igkv8-30, LOC545852, Igkv6-29, Igkv8-28, Igkv8-27, Igkv8-26, LOC667812, Igkv6-25, Igkv8-24, Igkv8-23-1, Igkv6-23, LOC667829, Igkv8-22, Igk-V8-21, EG667840, Igk-V19-20, Igk-V8-19, Igk-V8-18, LOC667863, Igk-V19-17, Igk-V8-16, Igk-V19-15, LOC667872, LOC620497, Igk-V19-14, LOC667889, Igk-V19-13, LOC667902, Igkv3-12-1, Igk-V21-12, Igk-V21-11, Igk-V21-10, Igk-V21-9, Igk-V21-8, Igk-V21-7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147L20.bB6Ng01-147L20.g
ACCDH944534DH944535
length1,033486
definitionDH944534|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L20, 5' end.DH944535|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgaggcccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattattccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggact
ttttggcttattgactgtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tctacttagatttgaccttagtacaaggagatagaaatggatcaattaac
attcttctgcatgataactgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatgattttagctcccttgtcaaagatcaagt
gaacataggtgtgtgggttcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcactatactggtaccatgcagttttgatcacagttgc
tctgtagtacagttttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatctgccgattgccctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaacatagccattt
ttacaatgttgatcctgccaatccatgagcatgagagatctttccatctt
ctgagatcttctttaatttcttctttagagacttgaagtttttatcatac
agatctttcacttccttagagtcactccaagatattatatattttgtgac
tatgagaaggtgttgtttccctaatttcttctcagcctgtttgttcttgt
gtagaggaaggtcattgactggtttgtgttaat
aaaatgtcctaccactaaatggttaactgatgagcctgtttggatagaaa
atattcttttttattagatatttaatttatttatgtttctttttaataaa
aaactcatgaaaaaattgtattcatataggtaagtgttttttttttctta
taaaggataagacttaattcagggtggcttacaggttcagaggttcagtc
cattatcatcatagcaagaagcatggcagcatgcaggcagacatgttgtt
ggagaaggagctgagagttctacattttgatccccaggtaaccaggagag
ctctcttctgcactaagtagaacttaaatgtagagcctcaaaacccaacc
ccccatagcgatgcactttctcctaatagtgcaacttcccttgagccaag
catatacaaactgccacaatgtaacctctttttatacatttacttacttt
gaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_69589389_69589880
seq2: B6Ng01-147L20.g_71_562 (reverse)

seq1  ACACACACACACACACACACACACACACACACATTCAAAGTAAGTAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACATTCAAAGTAAGTAAATG  50

seq1  TATAAAAAGAGGTTACATTGTGGCAGTTTGTATATGCTTGGCTCAAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAGAGGTTACATTGTGGCAGTTTGTATATGCTTGGCTCAAGGGA  100

seq1  AGTTGCACTATTAGGAGAAAGTGCATCGCTATGGGGGGTTGGGTTTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCACTATTAGGAGAAAGTGCATCGCTATGGGGGGTTGGGTTTTGAG  150

seq1  GCTCTACATTTAAGTTCTACTTAGTGCAGAAGAGAGCTCTCCTGGTTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACATTTAAGTTCTACTTAGTGCAGAAGAGAGCTCTCCTGGTTACC  200

seq1  TGGGGATCAAAATGTAGAACTCTCAGCTCCTTCTCCAACAACATGTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATCAAAATGTAGAACTCTCAGCTCCTTCTCCAACAACATGTCTGC  250

seq1  CTGCATGCTGCCATGCTTCTTGCTATGATGATAATGGACTGAACCTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGCTGCCATGCTTCTTGCTATGATGATAATGGACTGAACCTCTGA  300

seq1  ACCTGTAAGCCACCCTGAATTAAGTCTTATCCTTTATAAGAAAAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAAGCCACCCTGAATTAAGTCTTATCCTTTATAAGAAAAAAAAAA  350

seq1  CACTTACCTATATGAATACAATTTTTTCATGAGTTTTTTATTAAAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACCTATATGAATACAATTTTTTCATGAGTTTTTTATTAAAAAGAA  400

seq1  ACATAAATAAATTAAATATCTAATAAAAAAGAATATTTTCTATCCAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATAAATTAAATATCTAATAAAAAAGAATATTTTCTATCCAAACA  450

seq1  GGCTCATCAGTTAACCATTTAGTGGTAGGACATTTTGAATTC  492
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATCAGTTAACCATTTAGTGGTAGGACATTTTGAATTC  492