BAC Information

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BAC

Clone NameB6Ng01-148P18
Chromosome6 (Build37)
Map Location 33,915,611 - 34,047,869
singlet/doubletdoublet
Overlap geneExoc4, Lrguk
Upstream geneChchd3, LOC100039118, Gm1401
Downstream geneSlc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik, Cnot4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148P18.bB6Ng01-148P18.g
ACCDH945445DH945446
length2691,141
definitionDH945445|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P18, 5' end.DH945446|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,915,611 - 33,915,881)(34,046,724 - 34,047,869)
sequence
gaattcctttgttttaagcaactgcactttctgaagggaaatgaagccag
actctggctacagctgcccagcagaagtttggagagagatacagtcctgt
ggggggggggggagcacagctggcttggacttttgaagtctccaggcgca
acaccccagaattgtgaaagtgtgctcactccagaataaggatgataagt
aactgcttgtctgccctcctcccccaactttggagtgccttgggatctgg
cttttggcctcacatttca
gaattcacagatgccactggcttaactcctggggccaccagagataccct
aaaagcgtattaataaggactatattcattagaatttcaaatatactcac
ttgaatgttgtctgatctctacaatgccactgaagtggaagtttatcttt
aattatcaactgaaaaaaaaaacctccctgtgcaaattaactgtaaacac
aagataaggttttgccttaagaaaacagtctttttcagaatattaaacct
tttagaaaaataaggttctgttgatgatatagatctgatgactgactgta
atccatcctgtctactttcaagctagaattccattagtcaataacaagat
gccacggtttcgattagtagatgtttctgagaagttatgacacttttata
aattctataacttatacctttcattaaatcagataggcgtaacctactta
ttccaaataagtaagattttactatacactctaaagtggcagtctacttt
cctgtgcacacattattttgcctgttaatttgctaggtagtcactgcacg
ctatagtcggggtcctgatcactgtaggaacaggaagaggcacagaatag
agtgatggagcctgcaggccactgtgccaagtcttgctcatcgctcctta
gttcagcagcaccacacagaaacacacatctctcggttacccaggggact
aatcactgtttatccaaacccacaagggactgatgtaaaagccagcacac
caatttattaatttacaatgggagatggggcaggttcagggagcagggca
gcatgttctcacgtaagatacagcccgcacaggggccagttccacccagg
ggaccaaattaaagattacaaggttgcttggatagcaaagaattaaagca
cagggagccatatttcctcaagagagagctccatggaagtccagcctcac
cagcctatttgggcagacaaaagctttcatcaagtatcttctagttggca
tgtcataacctcattcctttaacatagagaatacgttcctgctatggcag
aaatgcattcgtatcttgtgagtaactggtactgcacggacctctgtcta
atatatgaataccttgacttggggaggaagtcaaactgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_33915611_33915881
seq2: B6Ng01-148P18.b_44_313

seq1  GGAATTCCTTTGTTTTAAGCAACTGCACTTTCTGAAGGGAAATGAAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCCTTTGTTTTAAGCAACTGCACTTTCTGAAGGGAAATGAAGCCA  50

seq1  GACTCTGGCTACAGCTGCCCAGCAGAAGTTTGGAGAGAGATACAGTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGGCTACAGCTGCCCAGCAGAAGTTTGGAGAGAGATACAGTCCTG  100

seq1  TGGGGGGGGGGGGGAGCACAGCTGGCTTGGACTTTTGAAGTCTCCAGGCG  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-GGGGGGGGGGGGAGCACAGCTGGCTTGGACTTTTGAAGTCTCCAGGCG  149

seq1  CAACACCCCAGAATTGTGAAAGTGTGCTCACTCCAGAATAAGGATGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCCCAGAATTGTGAAAGTGTGCTCACTCCAGAATAAGGATGATAA  199

seq1  GTAACTGCTTGTCTGCCCTCCTCCCCCAACTTTGGAGTGCCTTGGGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGCTTGTCTGCCCTCCTCCCCCAACTTTGGAGTGCCTTGGGATCT  249

seq1  GGCTTCAGGCCTCACATTTCA  271
      |||||  ||||||||||||||
seq2  GGCTTTTGGCCTCACATTTCA  270

seq1: chr6_34046724_34047869
seq2: B6Ng01-148P18.g_68_1208 (reverse)

seq1  TTGCAGTTTTGTACTCTCTTCCCAAGTCAA-GTATTCCTTATATTTTAGA  49
      |||||||||   |||  || |||||||||| ||||||   |||| |||||
seq2  TTGCAGTTT--GACTTCCTCCCCAAGTCAAGGTATTC---ATATATTAGA  45

seq1  CAGAGGTCCGTGCAGTACCAGTTACTCAC-AGATACGAATGCCATTTCTG  98
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  CAGAGGTCCGTGCAGTACCAGTTACTCACAAGATACGAATG-CATTTCTG  94

seq1  CCAT-GCAGGAACGTATCTCCTATGTTAAAGGAATGGAGGTTATGACATG  147
      |||| ||||||||||||   ||||||||||||||| ||||||||||||||
seq2  CCATAGCAGGAACGTATTCTCTATGTTAAAGGAAT-GAGGTTATGACATG  143

seq1  CCAACTAGAAGATACTTGATGAAAGCTTGTGGTCTGCCCAAATAGGCTGG  197
      |||||||||||||||||||||||||||| | |||||||||||||||||||
seq2  CCAACTAGAAGATACTTGATGAAAGCTT-TTGTCTGCCCAAATAGGCTGG  192

seq1  TGAGGCTGGACCTCCATGGAGCTCTCTCTTGAGGAAATATGGCTCCCTGT  247
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTGGACTTCCATGGAGCTCTCTCTTGAGGAAATATGGCTCCCTGT  242

seq1  GCTTTAATTCTTTGCTATCCAAGCAACCTTGTAATCTTTAATTTGGTCCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAATTCTTTGCTATCCAAGCAACCTTGTAATCTTTAATTTGGTCCC  292

seq1  CTGGGTGGAACTGGCCCCTGTGCGGGCTGTATCTTACGTGAGAACATGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGGAACTGGCCCCTGTGCGGGCTGTATCTTACGTGAGAACATGCT  342

seq1  GCCCTGCTCCCTGAACCTGCCCCATCTCCCATTGTAAATTAATAAATTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGCTCCCTGAACCTGCCCCATCTCCCATTGTAAATTAATAAATTGG  392

seq1  TGTGCTGGCTTTTACATCAGTCCCTTGTGGGTTTGGATAAACAGTGATTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGGCTTTTACATCAGTCCCTTGTGGGTTTGGATAAACAGTGATTA  442

seq1  GTCCCCTGGGTAACCGAGAGATGTGTGTTTCTGTGTGGTGCTGCTGAACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCTGGGTAACCGAGAGATGTGTGTTTCTGTGTGGTGCTGCTGAACT  492

seq1  AAGGAGCGATGAGCAAGACTTGGCACAGTGGCCTGCAGGCTCCATCACTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCGATGAGCAAGACTTGGCACAGTGGCCTGCAGGCTCCATCACTC  542

seq1  TATTCTGTGCCTCTTCCTGTTCCTACAGTGATCAGGACCCCGACTATAGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGTGCCTCTTCCTGTTCCTACAGTGATCAGGACCCCGACTATAGC  592

seq1  GTGCAGTGACTACCTAGCAAATTAACAGGCAAAATAATGTGTGCACAGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTGACTACCTAGCAAATTAACAGGCAAAATAATGTGTGCACAGGA  642

seq1  AAGTAGACTGCCACTTTAGAGTGTATAGTAAAATCTTACTTATTTGGAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGACTGCCACTTTAGAGTGTATAGTAAAATCTTACTTATTTGGAAT  692

seq1  AAGTAGGTTACGCCTATCTGATTTAATGAAAGGTATAAGTTATAGAATTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGTTACGCCTATCTGATTTAATGAAAGGTATAAGTTATAGAATTT  742

seq1  ATAAAAGTGTCATAACTTCTCAGAAACATCTACTAATCGAAACCGTGGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTGTCATAACTTCTCAGAAACATCTACTAATCGAAACCGTGGCA  792

seq1  TCTTGTTATTGACTAATGGAATTCTAGCTTGAAAGTAGACAGGATGGATT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTATTGACTAATGGAATTCTAGCTTGAAAGTAGACAGGATGGATT  842

seq1  ACAGTCAGTCATCAGATCTATATCATCAACAGAACCTTATTTTTCTAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAGTCATCAGATCTATATCATCAACAGAACCTTATTTTTCTAAAA  892

seq1  GGTTTAATATTCTGAAAAAGACTGTTTTCTTAAGGCAAAACCTTATCTTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAATATTCTGAAAAAGACTGTTTTCTTAAGGCAAAACCTTATCTTG  942

seq1  TGTTTACAGTTAATTTGCACAGGGAGGTTTTTTTTTTCAGTTGATAATTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAGTTAATTTGCACAGGGAGGTTTTTTTTTTCAGTTGATAATTA  992

seq1  AAGATAAACTTCCACTTCAGTGGCATTGTAGAGATCAGACAACATTCAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAACTTCCACTTCAGTGGCATTGTAGAGATCAGACAACATTCAAG  1042

seq1  TGAGTATATTTGAAATTCTAATGAATATAGTCCTTATTAATACGCTTTTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATATTTGAAATTCTAATGAATATAGTCCTTATTAATACGCTTTTA  1092

seq1  GGGTATCTCTGGTGGCCCCAGGAGTTAAGCCAGTGGCATCTGTGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCTCTGGTGGCCCCAGGAGTTAAGCCAGTGGCATCTGTGAATTC  1141