BAC Information

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BAC

Clone NameB6Ng01-150J11
Chromosome6 (Build37)
Map Location 19,358,313 - 19,359,379
singlet/doubletsinglet
Overlap genenone
Upstream geneCttnbp2, EG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150J11.bB6Ng01-150J11.g
ACCDH946633DH946634
length1,2241,058
definitionDH946633|Mus musculus domesticus DNA, BAC clone: B6Ng01-150J11, 5' end.DH946634|Mus musculus domesticus DNA, BAC clone: B6Ng01-150J11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtaagaatggctaagatcaaaaattcaggtgacatt
agatgctggcaagtttgtggagaaagaggaacacttctccgctggtggga
ttgcaagcttctacaaccactctggaaatcagtctggtggttcctcagaa
atttggacattgtactatcaaaagatccggcaatacatctcctgggcata
tactcagaatatgttccaactggtaataaggacacatgctccactacgtt
catagcagccttatttataatagccagaagttgcaaagaacccagatgtc
cctcaacagaggaatggatacagaaaatgtgatacatttacacaatggaa
tactactcagctattaaaaacaataaatttatgaaattcttgggcaactg
gatgtatctggaggatatcatcctgagtgaggaaacacaatcacaaaaga
agtcacttgatatgcactcactgataagtggatattagcccagaaactta
gaatacccaagatacaatttgcaaaacacaagaaaatcaagaagaaggaa
gaccaacatgtggatacttcattcctccttagaatagggaacaaaatacc
catggaaggagttacttaaacatttataaaatccaaattttctaaggaaa
ataattttggttaaatcccacaaggtttgtaagtttgtacttttatcttg
gactttttttcagctaaggaatttaattaatacaagtgatatacacttaa
agaacagatagtttctacattgttttatgtacacagagcaaatgatacga
tgtaaattttatatttgatagaaacaaaatatagatttgtcttagtcagg
gtttctattcctgcacaaatatcatgaccaagaagcaagttggggatgaa
agggttattggcttatactcatgcttctgtcatcacaagaagtcagactg
aacacaagcagtcagaagcaggagctgatgcaagcatgaggatgttcttt
tggctgcttccctgcctgcagcgcctctttaagaacagacatacagtcca
aaatggctcaccccagaccttctgatacgtattggaagaatgctttgaac
tggaatctcagtgagaggcatatc

gaattctttgtttagctctgtaccccaagaaggtaataccttttgaataa
caggatttgaaggatttgactgtagataggtggaagacctactggtttac
ctgtttgacgctctgtatgcaatccctagtactacaaacaaagaacaaca
aagacttcaactgcactaactttgacagctttttacatcttggataaaat
tttcaaatataatgttatcaaaaattaaactttatctatgacttttacct
aatatataatttaaatattttcccccatttttgtggattagtgggttaag
tcgtcaaatttcatttagcactgaaacagttttatagataagaaatatag
aaggaagtttttattataaactgattatcctggtaaagcccccaggattg
tcaaactgttatttttttctgcacaaattgttgactatacatctatagtt
caactcaccaccacatctccgtggaggtaggggtgatagaaccttccatc
catggcagaagtaatggagaaatctccagtcttgccttgcaaagtataat
gcactttgtgggtgtctcattttcagtggacaaacttaaaagatatgtaa
ttaaccaaaacagtctatgtcagttgcatgaaaggctggttcaatcaata
taagttctgacccaaaacagcatgttgaatactagaagggaatctttagt
tttatcctagagattagctagtggagtctaagtaagctactacagtaaat
taaaatgcagggtcaagagagtcagacatgaaattttcaggaaatgttca
aggtggtctctgtagttgcagtagagatgataatcaatgctatgatagaa
atagaataggaacaatgtcagcatgcacaaatgtcttaaagagttacatg
gttgggaaaggcagcatttccttccctgctgagatctgaaggctcaaaga
acacaatgtacttaattatacttttgatgcttttcctgttaaatgcagaa
atgctcaggactcatgtgtttcagtactagcaaagtgtaacactgtttgg
gagctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19358313_19359379
seq2: B6Ng01-150J11.g_70_1127

seq1  GAATTCTTTGTTTAGCTCTGTACCCCAAGAAGGTAATACCTTTTGAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCCAAGAAGGTAATACCTTTTGAATAA  50

seq1  CAGGATTTGAAGGATTTGACTGTAGATAGGTGGAAGACCTACTGGTTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTTGAAGGATTTGACTGTAGATAGGTGGAAGACCTACTGGTTTAC  100

seq1  CTGTTTGACGCTCTGTATGCAATCCCTAGTACTACAAACAAAGAACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGACGCTCTGTATGCAATCCCTAGTACTACAAACAAAGAACAACA  150

seq1  AAGACTTCAACTGCACTAACTTTGACAGCTTTTTACATCTTGGATAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTCAACTGCACTAACTTTGACAGCTTTTTACATCTTGGATAAAAT  200

seq1  TTTCAAATATAATGTTATCAAAAATTAAACTTTATCTATGACTTTTACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATATAATGTTATCAAAAATTAAACTTTATCTATGACTTTTACCT  250

seq1  AATATATAATTTAAATATTTTCCCCCATTTTTGTGGATTAGTGGGTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATAATTTAAATATTTTCCCCCATTTTTGTGGATTAGTGGGTTAAG  300

seq1  TCGTCAAATTTCATTTAGCACTGAAACAGTTTTATAGATAAGAAATATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCAAATTTCATTTAGCACTGAAACAGTTTTATAGATAAGAAATATAG  350

seq1  AAGGAAGTTTTTATTATAAACTGATTATCCTGGTAAAGCCCCCAGGATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGTTTTTATTATAAACTGATTATCCTGGTAAAGCCCCCAGGATTG  400

seq1  TCAAACTGTTATTTTTTTCTGCACAAATTGTTGACTATACATCTATAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTGTTATTTTTTTCTGCACAAATTGTTGACTATACATCTATAGTT  450

seq1  CAACTCACCACCACATCTCCGTGGAGGTAGGGGTGATAGAACCTTCCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCACCACCACATCTCCGTGGAGGTAGGGGTGATAGAACCTTCCATC  500

seq1  CATGGCAGAAGTAATGGAGAAATCTCCAGTCTTGCCTTGCAAAGTATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAGAAGTAATGGAGAAATCTCCAGTCTTGCCTTGCAAAGTATAAT  550

seq1  GCACTTTGTGGGTGTCTCATTTTCAGTGGACAAACTTAAAAGATATGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTGTGGGTGTCTCATTTTCAGTGGACAAACTTAAAAGATATGTAA  600

seq1  TTAACCAAAACAGTCTATGTCAGTTGCATGAAAGGCTGGTTCAATCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAAAACAGTCTATGTCAGTTGCATGAAAGGCTGGTTCAATCAATA  650

seq1  TAAGTTCTGACCCAAAACAGCATGTTGAATACTAGAAGGGAATCTTTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCTGACCCAAAACAGCATGTTGAATACTAGAAGGGAATCTTTAGT  700

seq1  TTTATCCTAGAGATTAGCTAGTGGAGTCTAAGTAAGCTACTACAGTAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCTAGAGATTAGCTAGTGGAGTCTAAGTAAGCTACTACAGTAAAT  750

seq1  TAAAATGCAGGGTCAAGAGAGTCAGACATGAAATTTTCAGGAAATGTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCAGGGTCAAGAGAGTCAGACATGAAATTTTCAGGAAATGTTCA  800

seq1  AGGTGGTCTCTGTAGTTGCAGTAGAGATGATAATCAATGCTATGATAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTCTCTGTAGTTGCAGTAGAGATGATAATCAATGCTATGATAGAA  850

seq1  ATAGAATAGGAACAATGTCAGGCATGCACAAATGTCTTAAAGAGTTACAT  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATAGAATAGGAACAATGTCA-GCATGCACAAATGTCTTAAAGAGTTACAT  899

seq1  GGTTGGG-AAGGCAGCATTTCCTTCCCTGCTGAGATCTGAAGGGCTCAAA  949
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  GGTTGGGAAAGGCAGCATTTCCTTCCCTGCTGAGATCTGAA-GGCTCAAA  948

seq1  GAACACAATGTACTTAATTATACTTTTGATGCTTTTCCTGGTTAAATGCA  999
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  GAACACAATGTACTTAATTATACTTTTGATGCTTTTCCT-GTTAAATGC-  996

seq1  AGAAATGCTCCAGGGACTCATGTGTTTCAGTAACTAGCAGAGTTGTTAAC  1049
      ||||||||||   |||||||||||||||||| ||||||| |||   ||||
seq2  AGAAATGCTC--AGGACTCATGTGTTTCAGT-ACTAGCAAAGT--GTAAC  1041

seq1  ACTGTTTGGGAAGCTGTG  1067
      |||||||||| |||||||
seq2  ACTGTTTGGG-AGCTGTG  1058


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