BAC Information

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BAC

Clone NameB6Ng01-152G15
Chromosome2 (Build37)6 (Build37)
Map Location 142,776,691 - 142,777,69811,029,567 - 11,030,086
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152G15.bB6Ng01-152G15.g
ACCDH947993DH947994
length893620
definitionDH947993|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G15, 5' end.DH947994|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,691 - 142,777,698)(11,029,567 - 11,030,086)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagcccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tgtctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcac
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcaaagatcaagt
aaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattctgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccacctt
ctgagatcttccttaatttctttcttcagagatttgaagtttt
gaattctcagccatgagaaaagaactgtaatgctcagagccagtgctact
gagacagagcagttttccaggcctgggctggaattctcagctgcgagaaa
gaggagagggaaattacacccaagggaaagggtcttaaaatgaggggtaa
ccctgagctcacgaaatcttctctgtgaccatgcagaaggtcactgagac
tagtgcgaatggggacttaccagatctgggctagcgagcgtggtagtggc
tgaggatgggatgcaaacccgtagagtttctgggtccgaatcacagtgca
ccaatgttgtgatgataaaaagataaggagctataagaataggtcctggc
agggtgtgagggaagggggtgcctcagagggctcaagccaaagcatccct
tccctccttccccccagggaccagacacacgggtataataaagaatggag
tttattcagggcatggggagcggagttaagagagtagcagagacagagaa
aggtagagaaggagatagtagagaagtagatgctggccatgaccaccacg
tggagagagggggaagtaagggggcaagaggcaagggagagaagcaggag
taggagagagagaggagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776691_142777698
seq2: B6Ng01-152G15.b_46_593 (reverse)

seq1  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTTAC  50

seq1  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCAT  100
      |||||||| |||||||||||||||||||||||| ||||||||||||||||
seq2  TTGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCAT  100

seq1  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGG  150
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCGTGTAGAAGAATGT  150

seq1  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200

seq1  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGACAGT  250

seq1  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAA  300
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAA  300

seq1  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350

seq1  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  400

seq1  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450

seq1  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  500
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  500

seq1  TCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTGGAAGA  550
      |||||||||||||||||||||||||||||| ||            ||| |
seq2  TCAAATAACCCCATTAAAAAATGGGGCTCAGAA----------CTGAACA  540

seq1  AAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGT  600
      ||||    |||                                       
seq2  AAGA----ATTC--------------------------------------  548

seq1  AGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATC  650
                                                        
seq2  --------------------------------------------------  548

seq1  TAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAG  700
                                                        
seq2  --------------------------------------------------  548

seq1  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTC  750
                                                        
seq2  --------------------------------------------------  548

seq1  CTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATG  800
                                                        
seq2  --------------------------------------------------  548

seq1  GGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATA  850
                                                        
seq2  --------------------------------------------------  548

seq1  AGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAA  900
                                                        
seq2  --------------------------------------------------  548

seq1  TCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGA  950
                                                        
seq2  --------------------------------------------------  548

seq1  CCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACA  1000
                                                        
seq2  --------------------------------------------------  548

seq1  AAGAATTC  1008
              
seq2  --------  548

seq1: chr6_11029567_11030086
seq2: B6Ng01-152G15.g_70_589

seq1  GAATTCTCAGCCATGAGAAAAGAACTGTAATGCTCAGAGCCAGTGCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCCATGAGAAAAGAACTGTAATGCTCAGAGCCAGTGCTACT  50

seq1  GAGACAGAGCAGTTTTCCAGGCCTGGGCTGGAATTCTCAGCTGCGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGCAGTTTTCCAGGCCTGGGCTGGAATTCTCAGCTGCGAGAAA  100

seq1  GAGGAGAGGGAAATTACACCCAAGGGAAAGGGTCTTAAAATGAGGGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAGGGAAATTACACCCAAGGGAAAGGGTCTTAAAATGAGGGGTAA  150

seq1  CCCTGAGCTCACGAAATCTTCTCTGTGACCATGCAGAAGGTCACTGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGCTCACGAAATCTTCTCTGTGACCATGCAGAAGGTCACTGAGAC  200

seq1  TAGTGCGAATGGGGACTTACCAGATCTGGGCTAGCGAGCGTGGTAGTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCGAATGGGGACTTACCAGATCTGGGCTAGCGAGCGTGGTAGTGGC  250

seq1  TGAGGATGGGATGCAAACCCGTAGAGTTTCTGGGTCCGAATCACAGTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATGGGATGCAAACCCGTAGAGTTTCTGGGTCCGAATCACAGTGCA  300

seq1  CCAATGTTGTGATGATAAAAAGATAAGGAGCTATAAGAATAGGTCCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTGTGATGATAAAAAGATAAGGAGCTATAAGAATAGGTCCTGGC  350

seq1  AGGGTGTGAGGGAAGGGGGTGCCTCAGAGGGCTCAAGCCAAAGCATCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTGAGGGAAGGGGGTGCCTCAGAGGGCTCAAGCCAAAGCATCCCT  400

seq1  TCCCTCCTTCCCCCCAGGGACCAGACACACGGGTATAATAAAGAATGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTTCCCCCCAGGGACCAGACACACGGGTATAATAAAGAATGGAG  450

seq1  TTTATTCAGGGCATGGGGAGCGGAGTTAAGAGAGTAGCAGAGACAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGGGCATGGGGAGCGGAGTTAAGAGAGTAGCAGAGACAGAGAA  500

seq1  AGGTAGAGAAGGAGATAGTA  520
      ||||||||||||||||||||
seq2  AGGTAGAGAAGGAGATAGTA  520