BAC Information

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BAC

Clone NameB6Ng01-155I12
Chromosome6 (Build37)
Map Location 129,267,770 - 129,398,707
singlet/doubletdoublet
Overlap gene4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a
Upstream geneTulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69
Downstream geneClec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155I12.bB6Ng01-155I12.g
ACCDH950287DH950288
length1,1331,126
definitionDH950287|Mus musculus domesticus DNA, BAC clone: B6Ng01-155I12, 5' end.DH950288|Mus musculus domesticus DNA, BAC clone: B6Ng01-155I12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,267,770 - 129,268,911)(129,397,569 - 129,398,707)
sequence
gaattcacaggaaagaaagaaaacatcgtgcagaggaggttccaggtaga
gcttagcagcacttaattgggcaaagtacttaatggtcattattcagagg
ctggccaagacacatggttttaatcccagcactagtgaggcagagtcagg
caagtttttgtgagttcaagaccaacctgatctatacaatgaattccagt
gctacagagtgagaccctgtctcaaagaagccaataaaactaaatacacc
taaggacaattagctttgataccacaaggttagtatgtaactcattttct
ggtcataaatttgatatatttgtttgcctaacagcatttactaataagga
aaaacaaatttaaaatttttagatatttaaaattcgcgtgtgcgagtgtg
tgtgtatgtagactagaagacagcttgcaggagttggctctttgcttcta
ctatgtgggtcctaaggactcctctggtaaggcttggaggtgagcacctt
tagcagtagagctagctcaatggcctcctcaaatctaaaatgtcttagta
atttttggaatggaagatactctgccaacatttaaaagatgaaacttttt
gtttcagagacttttagtagttagtaagtggcaatcctgaggtgatgact
agatcaatgataattcctaatcaatatgatagaaatagacatgagtccat
aattttctttatacttcaaggaaacaattagcctaattactaaaaccctc
aagtcaagtgagttaggaaccaccacttgttattgttgtgttccaggcag
ttctacaatccaggtgaggggtttgtagaattgaaaggctttctggcctg
ctggtgcctcctgctggttgtgtaaagcctgaagagggctcttacttgat
cccagatgaacatcctgtggggaatggtgaacaggagtcctgcagcacgc
cctgacacccttctcatttcccatcagacacatgcatggaattctttctt
ccagccattgttaccagtgtatgggagctgaggaatgccagaagatgaga
acagacttacactgctattccatacttcattatctttttgcctacacgca
taaagagaatttactaatcaaactctgtaacat
gaattcagcctgagtccaagggtctggaaggtgagacacacttggaactg
tctaaagacacatatatttgaagaatctgagttcaaggtaagaggttggg
gctaaataaagacatggtaagaaactgggttcagggtaagaattttgggc
tgaatgcctatgtaacaatcatataaatgaattaatcatttaaataatag
gaatagaaattaaaattcacatgagtgaattatatcactgagggaggaaa
tataaaaccagaaatctataaaacacaaatcaactgacaaggaaacaatt
cagggaatgcccgccgtagcctggcggacataaagacccagccagaagct
gctagaatggagcagcagagagagtggaggtagggctcgggtaggaataa
gcacctggaacacttgcagagtaaactggaaatagtgggagacacaatgc
aaggcaagagtggaatgttaaaaataacatactgcagaacatttaaaagt
agactaaacacagctcattatttcaacaacaaggaggaaaacagaagttt
atttatcctcataatcatctccctacatggctcagagtgctcctcagctc
aaaaactcttcctatctcagtgtcccaagagttagggtcactgctgtgga
ccagcacctcaggtcaagttattggttattttatagcaagatctcaaaaa
ggtgctgctgatgatggaaaactatttatgatttttatcatcttgtctct
tcatcttctttgtagaaaatataatatgtttttgcagaggtgccacaaga
tggggtgacgacattttaaatttatttatttttttaagatgggaaacagt
ctaaccacactgtagattacaaagaagccaggatggccagctcacccgaa
cacatcaagaatagggcaatgatgtcacagaatgaacagattcctgccgc
agtgaaatgctatcttactgaacggatacaaaaaaaatacacgctcatta
gtatatttgaaaaacatattgaaaatcattctgtttcagttttgttctat
tcttatatatgatgctgtgcagttttttcctcccagctttaagtttcatt
ctacaatctgtcattgcagcagcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129267770_129268911
seq2: B6Ng01-155I12.b_50_1182

seq1  GAATTCACAGGAAAGAAAGAAAACATCGTGCAGAGGAGGTTCCAGGTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGAAAGAAAGAAAACATCGTGCAGAGGAGGTTCCAGGTAGA  50

seq1  GCTTAGCAGCACTTAATTGGGCAAAGTACTTAATGGTCATTATTCAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGCAGCACTTAATTGGGCAAAGTACTTAATGGTCATTATTCAGAGG  100

seq1  CTGGCCAAGACACATGGTTTTAATCCCAGCACTAGTGAGGCAGAGTCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCAAGACACATGGTTTTAATCCCAGCACTAGTGAGGCAGAGTCAGG  150

seq1  CAAGTTTTTGTGAGTTCAAGACCAACCTGATCTATACAATGAATTCCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTTGTGAGTTCAAGACCAACCTGATCTATACAATGAATTCCAGT  200

seq1  GCTACAGAGTGAGACCCTGTCTCAAAGAAGCCAATAAAACTAAATACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGAGTGAGACCCTGTCTCAAAGAAGCCAATAAAACTAAATACACC  250

seq1  TAAGGACAATTAGCTTTGATACCACAAGGTTAGTATGTAACTCATTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACAATTAGCTTTGATACCACAAGGTTAGTATGTAACTCATTTTCT  300

seq1  GGTCATAAATTTGATATATTTGTTTGCCTAACAGCATTTACTAATAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATAAATTTGATATATTTGTTTGCCTAACAGCATTTACTAATAAGGA  350

seq1  AAAACAAATTTAAAATTTTTAGATATTTAAAATTCGCGTGTGCGAGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAATTTAAAATTTTTAGATATTTAAAATTCGCGTGTGCGAGTGTG  400

seq1  TGTGTATGTAGACTAGAAGACAGCTTGCAGGAGTTGGCTCTTTGCTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTAGACTAGAAGACAGCTTGCAGGAGTTGGCTCTTTGCTTCTA  450

seq1  CTATGTGGGTCCTAAGGACTCCTCTGGTAAGGCTTGGAGGTGAGCACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGGGTCCTAAGGACTCCTCTGGTAAGGCTTGGAGGTGAGCACCTT  500

seq1  TAGCAGTAGAGCTAGCTCAATGGCCTCCTCAAATCTAAAATGTCTTAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTAGAGCTAGCTCAATGGCCTCCTCAAATCTAAAATGTCTTAGTA  550

seq1  ATTTTTGGAATGGAAGATACTCTGCCAACATTTAAAAGATGAAACTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGAATGGAAGATACTCTGCCAACATTTAAAAGATGAAACTTTTT  600

seq1  GTTTCAGAGACTTTTAGTAGTTAGTAAGTGGCAATCCTGAGGTGATGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGAGACTTTTAGTAGTTAGTAAGTGGCAATCCTGAGGTGATGACT  650

seq1  AGATCAATGATAATTCCTAATCAATATGATAGAAATAGACATGAGTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAATGATAATTCCTAATCAATATGATAGAAATAGACATGAGTCCAT  700

seq1  AATTTTCTTTATACTTCAAGGAAACAATTAGCCTAATTACTAAAACCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTTTATACTTCAAGGAAACAATTAGCCTAATTACTAAAACCCTC  750

seq1  AAGTCAAGTGAGTTAGGAACCACCACTTGTTATTGTTGTGTTCCAGGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGTGAGTTAGGAACCACCACTTGTTATTGTTGTGTTCCAGGCAG  800

seq1  TTCTACAATCCAGGTGAGGGGTTTGTAGAATTG-AAGGCTTTCTGGCCTG  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCTACAATCCAGGTGAGGGGTTTGTAGAATTGAAAGGCTTTCTGGCCTG  850

seq1  CTGGTGCCTCCTGCTGGTTGTGTAAAGCCTGAAAGAGGGCTCTTACTTGA  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGGTGCCTCCTGCTGGTTGTGTAAAGCCTG-AAGAGGGCTCTTACTTGA  899

seq1  TCCCAGATGAACATCCTGTGGGGAATGGTGAACAGGAGTCCTGCAGCACG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGATGAACATCCTGTGGGGAATGGTGAACAGGAGTCCTGCAGCACG  949

seq1  CCCTGACACCCTTCTCATTTCCCATCAGGACACATGCATGGAATTCTATC  999
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  CCCTGACACCCTTCTCATTTCCCATCA-GACACATGCATGGAATTCTTTC  998

seq1  TTCCAGCCATTGTTAACCAAGTGTATGGGAGCTGAGGAATGCCAAGAAGA  1049
      |||||||||||||||  | |||||||||||||||||||||||| ||||||
seq2  TTCCAGCCATTGTTA--CCAGTGTATGGGAGCTGAGGAATGCC-AGAAGA  1045

seq1  TGAGAACAAGACTTACAACCTGCTATTCCATACTTCATAATCTATTTTGC  1099
      ||||||| |||||||||  ||||||||||||||||||| |||| |||  |
seq2  TGAGAAC-AGACTTACA--CTGCTATTCCATACTTCATTATCTTTTTGCC  1092

seq1  TACACGCATAAAAGAG-ATTTACTAAAATCAAACTCTGTAACAT  1142
      ||||||||| |||||| |||||||  ||||||||||||||||||
seq2  TACACGCAT-AAAGAGAATTTACT--AATCAAACTCTGTAACAT  1133

seq1: chr6_129397569_129398707
seq2: B6Ng01-155I12.g_65_1190 (reverse)

seq1  CTTGCTGCTGCAATGACAGATGTGTAGAAATGAAACTAAAAAGCTGGGAG  50
      ||||||||||||||||||||| ||||| |||||||||  |||||||||||
seq2  CTTGCTGCTGCAATGACAGAT-TGTAG-AATGAAACT-TAAAGCTGGGAG  47

seq1  AAAAAAACTGCCACAGCATCATATTAATAAGAATAGGACAAAACTGAAAC  100
       ||||||||| |||||||||||||  |||||||||| |||||||||||||
seq2  GAAAAAACTG-CACAGCATCATAT--ATAAGAATAGAACAAAACTGAAAC  94

seq1  AGAATTGATTTTTCAATATGTTTTTCAAATTATTACTAATGAGCGTGTAT  150
      |||| ||| |||||||||||||||||||||   |||||||||||||||||
seq2  AGAA-TGA-TTTTCAATATGTTTTTCAAAT--ATACTAATGAGCGTGTAT  140

seq1  TTTTTTTGTATCCGTTCAGTAAGATAGCATTTCCACTGCGGCAGGAATCT  200
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  TTTTTTTGTATCCGTTCAGTAAGATAGCATTT-CACTGCGGCAGGAATC-  188

seq1  TGTTCATTCTGTGACATCATTGCCCTATTCTTGATGTTGTTCGGGTGAGC  250
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTTCATTCTGTGACATCATTGCCCTATTCTTGATG-TGTTCGGGTGAGC  237

seq1  TGGCCATCCTGGCTTCTTTGTAATCTACAGTGTGGTTAGACTGTTTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATCCTGGCTTCTTTGTAATCTACAGTGTGGTTAGACTGTTTCCCA  287

seq1  TCTTAAAAAAATAAATAAATTTAAAATGTCGTCACCCCATCTTGTGGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAAAAATAAATAAATTTAAAATGTCGTCACCCCATCTTGTGGCAC  337

seq1  CTCTGCAAAAACATATTATATTTTCTACAAAGAAGATGAAGAGACAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAAAAACATATTATATTTTCTACAAAGAAGATGAAGAGACAAGAT  387

seq1  GATAAAAATCATAAATAGTTTTCCATCATCAGCAGCACCTTTTTGAGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAATCATAAATAGTTTTCCATCATCAGCAGCACCTTTTTGAGATC  437

seq1  TTGCTATAAAATAACCAATAACTTGACCTGAGGTGCTGGTCCACAGCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATAAAATAACCAATAACTTGACCTGAGGTGCTGGTCCACAGCAGT  487

seq1  GACCCTAACTCTTGGGACACTGAGATAGGAAGAGTTTTTGAGCTGAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTAACTCTTGGGACACTGAGATAGGAAGAGTTTTTGAGCTGAGGAG  537

seq1  CACTCTGAGCCATGTAGGGAGATGATTATGAGGATAAATAAACTTCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGAGCCATGTAGGGAGATGATTATGAGGATAAATAAACTTCTGTT  587

seq1  TTCCTCCTTGTTGTTGAAATAATGAGCTGTGTTTAGTCTACTTTTAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTTGTTGTTGAAATAATGAGCTGTGTTTAGTCTACTTTTAAATG  637

seq1  TTCTGCAGTATGTTATTTTTAACATTCCACTCTTGCCTTGCATTGTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAGTATGTTATTTTTAACATTCCACTCTTGCCTTGCATTGTGTCT  687

seq1  CCCACTATTTCCAGTTTACTCTGCAAGTGTTCCAGGTGCTTATTCCTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTATTTCCAGTTTACTCTGCAAGTGTTCCAGGTGCTTATTCCTACC  737

seq1  CGAGCCCTACCTCCACTCTCTCTGCTGCTCCATTCTAGCAGCTTCTGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCCTACCTCCACTCTCTCTGCTGCTCCATTCTAGCAGCTTCTGGCT  787

seq1  GGGTCTTTATGTCCGCCAGGCTACGGCGGGCATTCCCTGAATTGTTTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTTATGTCCGCCAGGCTACGGCGGGCATTCCCTGAATTGTTTCCT  837

seq1  TGTCAGTTGATTTGTGTTTTATAGATTTCTGGTTTTATATTTCCTCCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTTGATTTGTGTTTTATAGATTTCTGGTTTTATATTTCCTCCCTC  887

seq1  AGTGATATAATTCACTCATGTGAATTTTAATTTCTATTCCTATTATTTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATATAATTCACTCATGTGAATTTTAATTTCTATTCCTATTATTTAA  937

seq1  ATGATTAATTCATTTATATGATTGTTACATAGGCATTCAGCCCAAAATTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAATTCATTTATATGATTGTTACATAGGCATTCAGCCCAAAATTC  987

seq1  TTACCCTGAACCCAGTTTCTTACCATGTCTTTATTTAGCCCCAACCTCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTGAACCCAGTTTCTTACCATGTCTTTATTTAGCCCCAACCTCTT  1037

seq1  ACCTTGAACTCAGATTCTTCAAATATATGTGTCTTTAGACAGTTCCAAGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAACTCAGATTCTTCAAATATATGTGTCTTTAGACAGTTCCAAGT  1087

seq1  GTGTCTCACCTTCCAGACCCTTGGACTCAGGCTGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCACCTTCCAGACCCTTGGACTCAGGCTGAATTC  1126