BAC Information

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BAC

Clone NameB6Ng01-155J14
Chromosome6 (Build37)
Map Location 110,345,438 - 110,346,626
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043720
Downstream geneGrm7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155J14.bB6Ng01-155J14.g
ACCDH950337DH950338
length1,156516
definitionDH950337|Mus musculus domesticus DNA, BAC clone: B6Ng01-155J14, 5' end.DH950338|Mus musculus domesticus DNA, BAC clone: B6Ng01-155J14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaagcatgacatgaggagggcatacatatttaaagtagactc
atgtattacagaatgcttatactgacatattctcagctacagatgggtgc
taattagtttgcacagccaattaggagcacagataattagtgtcccctgg
tcaggattctgcttgtcttagacatttcaggaatgggcagacagagccaa
caagtcacttgagttcttcccttaagtttctgccttcccaattgtctaca
tgtagaaaattctaagaaaaatgaacaagttgaatgagtcttctttgtct
agccttacttccttatttatagagatgatacagagattatttatatcatg
tatgtgtactttatttgcttactttccaccacaagcattcctccctccaa
atggcctcattccacccctactttctctcaaacttatgacctatcattct
tgggtttttgtttcactttcttatatctctctctttatatatatatacat
aatatatatacatatacaatatatatatatatatatatatatatatacac
acccacatgtgagtgtgtgttatacatgtacattattctgctgagatcat
tttgtattttcgtatgtgcatgtatgagctgatcacctggccctaggtaa
tctaatctatcaaggggctagtgcctgaaaagatgatttaaggtcaatct
gctacagtgaaagatcttcacaactcaaagatttactgagttatgaacta
aaatatctcactttcctgctaaatttctaactctaagcctcaataaggta
tcatttagaaatgagttattttggaaattcttaggtttagatgaggtcag
gaaaattctgctctttatggtaagatttgtaccctcacaaaagaagagga
gtgttttctatctctgtcggcacatacctagaagttgcatgttaacacag
tcattacagtggtaactatctgaaataccgatagactcttgccagacact
gattttacagtcacatgtctatcctacccatgcccatgaaatatgacaga
ctactatgaatttttagaagaaattcatgtctcaaacaattctaaacaaa
attctagcaagctagacaaatgaagaagcaaatagggcttggggggtcct
ttcctg

tcacaaaaccggacctatcatgactgcattccataagaccccccaaaaaa
atagctgaaagagttagatgcagatatttgcactcaaccaatggacagaa
gctgctgacccatgtggctgaattagggaaagtgtggaaaaagctgagga
ggaaggaccagcagtctcatttaacgtggacctccaagttctctcaaaca
ctggaccacccatcaggcagcatacaccagctgatgtgagcccccaacaa
ataaacagcagaggactgctgggtctgtgttcaagcagagatgatgtgcc
taaccctcaagagactggaggcctcagagagtttagaggtctagttgggt
gagggctgtggggagggaacatcctcctggagacagtgggtaaggaggag
gtatgggatgtgaaacagtcagagggtagaccaggagcaaggaataaaat
ctggactgtgaatagatagatagatagatagatagatagatagatagata
gatagatagatagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_110345438_110346626
seq2: B6Ng01-155J14.b_46_1201

seq1  GAATTCAAAAAGCATGACATGAGGAGGGCATACATATTTAAAGTAGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAAGCATGACATGAGGAGGGCATACATATTTAAAGTAGACTC  50

seq1  ATGTATTACAGAATGCTTATACTGACATATTCTCAGCTACAGATGGGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTACAGAATGCTTATACTGACATATTCTCAGCTACAGATGGGTGC  100

seq1  TAATTAGTTTGCACAGCCAATTAGGAGCACAGATAATTAGTGTCCCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGTTTGCACAGCCAATTAGGAGCACAGATAATTAGTGTCCCCTGG  150

seq1  TCAGGATTCTGCTTGTCTTAGACATTTCAGGAATGGGCAGACAGAGCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATTCTGCTTGTCTTAGACATTTCAGGAATGGGCAGACAGAGCCAA  200

seq1  CAAGTCACTTGAGTTCTTCCCTTAAGTTTCTGCCTTCCCAATTGTCTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCACTTGAGTTCTTCCCTTAAGTTTCTGCCTTCCCAATTGTCTACA  250

seq1  TGTAGAAAATTCTAAGAAAAATGAACAAGTTGAATGAGTCTTCTTTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAAATTCTAAGAAAAATGAACAAGTTGAATGAGTCTTCTTTGTCT  300

seq1  AGCCTTACTTCCTTATTTATAGAGATGATACAGAGATTATTTATATCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTACTTCCTTATTTATAGAGATGATACAGAGATTATTTATATCATG  350

seq1  TATGTGTACTTTATTTGCTTACTTTCCACCACAAGCATTCCTCCCTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTACTTTATTTGCTTACTTTCCACCACAAGCATTCCTCCCTCCAA  400

seq1  ATGGCCTCATTCCACCCCTACTTTCTCTCAAACTTATGACCTATCATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTCATTCCACCCCTACTTTCTCTCAAACTTATGACCTATCATTCT  450

seq1  TGGGTTTTTGTTTCACTTTCTTATATCTCTCTCTTTATATATATATACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTTGTTTCACTTTCTTATATCTCTCTCTTTATATATATATACAT  500

seq1  AATATATATACATATACAATATATATATATATATATATATATATATACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATACATATACAATATATATATATATATATATATATATATACAC  550

seq1  ACCCACATGTGAGTGTGTGTTATACATGTACATTATTCTGCTGAGATCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACATGTGAGTGTGTGTTATACATGTACATTATTCTGCTGAGATCAT  600

seq1  TTTGTATTTTCGTATGTGCATGTATGAGCTGATCACCTGGCCCTAGGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTTTCGTATGTGCATGTATGAGCTGATCACCTGGCCCTAGGTAA  650

seq1  TCTAATCTATCAAGGGGCTAGTGCCTGAAAAGATGATTTAAGGTCAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCTATCAAGGGGCTAGTGCCTGAAAAGATGATTTAAGGTCAATCT  700

seq1  GCTACAGTGAAAGATCTTCACAACTCAAAGATTTACTGAGTTATGAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGTGAAAGATCTTCACAACTCAAAGATTTACTGAGTTATGAACTA  750

seq1  AAATATCTCACTTTCCTGCTAAATTTCTAACTCTAAGCCTCAATAAGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTCACTTTCCTGCTAAATTTCTAACTCTAAGCCTCAATAAGGTA  800

seq1  TCATTTAGAAATGAGTTATTTTGGAAATTCTTAGGTTTAGATGAGGTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGAAATGAGTTATTTTGGAAATTCTTAGGTTTAGATGAGGTCAG  850

seq1  GAAAATTCTGCTCTTTATGGTAAGATTTGTACCCTCACAAAAAGAAGAGG  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAAAATTCTGCTCTTTATGGTAAGATTTGTACCCTCAC-AAAAGAAGAGG  899

seq1  AGTGTTTTCTATCTCTGTCGGCACATACCTAGAAGTTGCATGTTAACACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTCTATCTCTGTCGGCACATACCTAGAAGTTGCATGTTAACACA  949

seq1  GTCATTACAGTGGTAACTATCTGAAATACCGATAAGAACTCTTGCCAGAC  1000
      ||||||||||||||||||||||||||||||||||   |||||||||||||
seq2  GTCATTACAGTGGTAACTATCTGAAATACCGATA--GACTCTTGCCAGAC  997

seq1  ACTGATTTTACAGTCACATGTCTTATCCTACCCCATGCCCATGAAATATG  1050
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  ACTGATTTTACAGTCACATGTC-TATCCTA-CCCATGCCCATGAAATATG  1045

seq1  ACCAAGACTACTATGAAATTTTTAAGAAGAAATATCAATTGGTCTCAAAA  1100
      ||  |||||||||||||  |||| ||||||||| |||    ||||| |||
seq2  AC--AGACTACTATGAA--TTTTTAGAAGAAAT-TCA---TGTCTC-AAA  1086

seq1  CAATATCTTAAAACAAAATACCATAGGCAGGCTAGACAAAATGAAAGAAA  1150
      |||| |||  ||||||||| | |   ||| ||||||| ||||| ||||| 
seq2  CAAT-TCT--AAACAAAATTCTA---GCAAGCTAGAC-AAATG-AAGAA-  1127

seq1  GGAAAATAAGGGGGCTTTTTGGAGGGGGTCCTTTTCCTG  1189
       | |||||   ||||||      |||||||| |||||||
seq2  -GCAAATA---GGGCTT-----GGGGGGTCC-TTTCCTG  1156


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