BAC Information

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BAC

Clone NameB6Ng01-156C20
Chromosome6 (Build37)
Map Location 141,442,884 - 141,444,000
singlet/doubletsinglet
Overlap genePde3a
Upstream genePlekha5, Aebp2, EG664868, LOC664875
Downstream geneSlco1c1, Slco1b2, EG435927, Slco1a4, LOC100042750, EG664913, Slco1a1, EG625716, Slco1a6, Slco1a5, Iapp, BC027061, Recql, Golt1b, B230216G23Rik, Gys2, Ldhb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156C20.bB6Ng01-156C20.g
ACCDH950750DH950751
length1,0981,131
definitionDH950750|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C20, 5' end.DH950751|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtaatgaaaattacaaagacttcaaaagcaagggagtaaaaaa
tgaagaaacctgggtgccttcgctgattctaccaccatgtcatgttgctt
atggttggctgtcaatcttattttctcctttattaaaatgaggaagtgcc
tcactaaatgttatgactctgttctgtggctagtgtttaagtctgctaat
atcactccacttttatcattttggaggccacaaaggtgcttcagagtcag
aattttgggagctcaagaaatggaccagtgggtaaagtgctttctgcgcc
agtacaaggacctcggcttgatctccagcatccatgtgaaaggatgagca
cacatcttgtgacatgcctctgcaatcacagatctggggaggtggaagcg
ggtgggtctctggagctcactggctaccaagcctagccaaataaatgaac
ttcaagttcgcaaggaaaaccctacctcaaaaactataagtggacattaa
cccctggcctccacatgcacctgtaccttcatgcacacacatgttcctat
acatatgcatacatgcatatacactcaaacatgtacaccaacagatcata
cttttaaagctacagtatctgattgttgtggcagagatgttttaaatttc
agggtatgggggctagttaattactgaaagccatgtgtaactgaatccat
agaactctcaatggatgctctactagacttgactaaaacagaaagagcaa
gggaacaacctatcagtgtggaggttaacatgctagtccagtatttggac
aaagcattctccactcaagcttagatgagcaagctaagcctgctaaataa
tggtcttggaataaatccttcaattccccatgcctgggtatgtacactac
taatgtctttgagtttaaatggcatccatgaagactctcatcagaggctc
agttgacaaacctctttatatattccaggggcaaacttctcttcataagc
atagcagcagctgactgcttgattggaaataagcaaagagaaactaagat
gataatacttcttgatctcaaatctcagctctagtctgaatccaatca
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgatcttggattcggttagcgagaattttattgaggatttttgt
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagcctttcgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagttggattat
ttcctgccgtctactcttcttgggtgaatttgcttcctttttttctagag
ctttagatgtgttgtcagctgctagtatgtgctctctcccgtttcttcat
ggaagcactcagagctatgagtttcctctcttagaaatgctttcattgtg
ttccaaagttgggtacgttggtggcttcaatttcataaactttaaaaggc
ctttatttccttctctattcctcctggaccagatactattgaagaagggt
tggtcagtccggagaggtggccttcttggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_141442884_141444000
seq2: B6Ng01-156C20.b_47_1144 (reverse)

seq1  TGATTTTGGGATTCAGACCTAGAGCCTGAGATTTGAGATTCAAGAGTTAT  50
      |||||   ||||||||| |||||| ||||||||||||| ||||||  |||
seq2  TGATT---GGATTCAGA-CTAGAG-CTGAGATTTGAGA-TCAAGAAGTAT  44

seq1  TTATTCATCTTTTAGTTTTTCTCTTTTGCTTTATTTCCAATTCAAGCAGT  100
      |   |||||  ||||||| ||   ||||| |||||||||| |||||||||
seq2  T--ATCATC--TTAGTTTCTC---TTTGC-TTATTTCCAA-TCAAGCAGT  85

seq1  CAGCCTGCTGCTATGCTTATGAAGAGAAGTTTGCCCCTGGAATATAATAA  150
      ||| ||||||||||||||||||||||||||||||||||||||||||   |
seq2  CAG-CTGCTGCTATGCTTATGAAGAGAAGTTTGCCCCTGGAATATA--TA  132

seq1  AAGAGGTTTGTCAACTGAGCCTCTGATGAGAGTCTTCATGGATTGCCATT  200
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGAGGTTTGTCAACTGAGCCTCTGATGAGAGTCTTCATGGA-TGCCATT  181

seq1  TAAACTCAAAGACATTAGTAGTGTACATACCCAGGCATGGGGAATTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCAAAGACATTAGTAGTGTACATACCCAGGCATGGGGAATTGAAG  231

seq1  GATTTATTCCAAGACCATTATTTAGCAGGCTTAGCTTGCTCATCTAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTCCAAGACCATTATTTAGCAGGCTTAGCTTGCTCATCTAAGCT  281

seq1  TGAGTGGAGAATGCTTTGTCCAAATACTGGACTAGCATGTTAACCTCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGAGAATGCTTTGTCCAAATACTGGACTAGCATGTTAACCTCCAC  331

seq1  ACTGATAGGTTGTTCCCTTGCTCTTTCTGTTTTAGTCAAGTCTAGTAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAGGTTGTTCCCTTGCTCTTTCTGTTTTAGTCAAGTCTAGTAGAG  381

seq1  CATCCATTGAGAGTTCTATGGATTCAGTTACACATGGCTTTCAGTAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTGAGAGTTCTATGGATTCAGTTACACATGGCTTTCAGTAATTA  431

seq1  ACTAGCCCCCATACCCTGAAATTTAAAACATCTCTGCCACAACAATCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCCCCCATACCCTGAAATTTAAAACATCTCTGCCACAACAATCAGA  481

seq1  TACTGTAGCTTTAAAAGTATGATCTGTTGGTGTACATGTTTGAGTGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAGCTTTAAAAGTATGATCTGTTGGTGTACATGTTTGAGTGTATA  531

seq1  TGCATGTATGCATATGTATAGGAACATGTGTGTGCATGAAGGTACAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTATGCATATGTATAGGAACATGTGTGTGCATGAAGGTACAGGTG  581

seq1  CATGTGGAGGCCAGGGGTTAATGTCCACTTATAGTTTTTGAGGTAGGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGAGGCCAGGGGTTAATGTCCACTTATAGTTTTTGAGGTAGGGTT  631

seq1  TTCCTTGCGAACTTGAAGTTCATTTATTTGGCTAGGCTTGGTAGCCAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGCGAACTTGAAGTTCATTTATTTGGCTAGGCTTGGTAGCCAGTG  681

seq1  AGCTCCAGAGACCCACCCGCTTCCACCTCCCCAGATCTGTGATTGCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCAGAGACCCACCCGCTTCCACCTCCCCAGATCTGTGATTGCAGAG  731

seq1  GCATGTCACAAGATGTGTGCTCATCCTTTCACATGGATGCTGGAGATCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCACAAGATGTGTGCTCATCCTTTCACATGGATGCTGGAGATCAA  781

seq1  GCCGAGGTCCTTGTACTGGCGCAGAAAGCACTTTACCCACTGGTCCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGGTCCTTGTACTGGCGCAGAAAGCACTTTACCCACTGGTCCATTT  831

seq1  CTTGAGCTCCCAAAATTCTGACTCTGAAGCACCTTTGTGGCCTCCAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCTCCCAAAATTCTGACTCTGAAGCACCTTTGTGGCCTCCAAAAT  881

seq1  GATAAAAGTGGAGTGATATTAGCAGACTTAAACACTAGCCACAGAACAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAGTGGAGTGATATTAGCAGACTTAAACACTAGCCACAGAACAGA  931

seq1  GTCATAACATTTAGTGAGGCACTTCCTCATTTTAATAAAGGAGAAAATAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAACATTTAGTGAGGCACTTCCTCATTTTAATAAAGGAGAAAATAA  981

seq1  GATTGACAGCCAACCATAAGCAACATGACATGGTGGTAGAATCAGCGAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGACAGCCAACCATAAGCAACATGACATGGTGGTAGAATCAGCGAAG  1031

seq1  GCACCCAGGTTTCTTCATTTTTTACTCCCTTGCTTTTGAAGTCTTTGTAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCAGGTTTCTTCATTTTTTACTCCCTTGCTTTTGAAGTCTTTGTAA  1081

seq1  TTTTCATTACAGAATTC  1117
      |||||||||||||||||
seq2  TTTTCATTACAGAATTC  1098