BAC Information

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BAC

Clone NameB6Ng01-158P07
Chromosome6 (Build37)Y (Build37)
Map Location 18,835,452 - 18,835,968265,060 - 266,141
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158P07.bB6Ng01-158P07.g
ACCDH952763DH952764
length9791,082
definitionDH952763|Mus musculus domesticus DNA, BAC clone: B6Ng01-158P07, 5' end.DH952764|Mus musculus domesticus DNA, BAC clone: B6Ng01-158P07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(265,060 - 266,141)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccggaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgaacatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgaaatattttatattat
ttgtgactattgagaaggtgtgtttccct
gaattcaaagcttacatagacttctcattttaagagggagcatctctggg
ctagagagatgaatcatctttaagagggcttcctagcttgttagaggtct
agttcccagtaaataaatggcttataactgcttatatctccagcttcaga
agataggacacactatctggaccacagacatacacatggcatattctgtt
gctctaattcccatacaagtttttaaaataagatgcccaatattgggcaa
atacaatgaggattaggacataatggaacaaagtgcagtatgaactagga
attactgtagtgggtattttcaaatatattttaaaacattactgtgcatg
gctgtgaagacaatatatgccctacatgttagcaaatcttacagaattgt
taagatcagaattacttgtgtaagtgggtttttttactaaccataatatc
attcaggagaaacacacctaccccatcacatacccttagtggagaagaag
ataatttgaatcccaggcataatcaaattaggatggtgcttagctttaaa
aattttttattaagatatggttatatcatggaggtaccctttccaagacc
ctactcctactccttttcaaattcatgaccttctgttctttaattattat
tgttacatgtacacatgaacacacatagacacacacacaaataaatagat
aaatgcaatctactagatctatttagtattgcttttgtctacatggtttt
agagctgactgctagggatttggttcagtgggtcaatttctggaccagat
tatctattcttttctcagtggtcttttatttatcatatcccttcatctaa
gtatgaagtccctaatattatgtctattggtagcaagtcttactaggcag
ccatctgtactgtcatggtgttatggtaccagggcaaaacttcttgttgt
ttctagaacaaattttgcagcagactttttggtcattttgctcttataat
atttctatcccctcttgcatgatgttccctggagctttaggtgcagatat
tatgcctgtagatatatttgtagtaattggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-158P07.b_44_561 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTAGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||| ||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAACAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chrY_265060_266141
seq2: B6Ng01-158P07.g_69_1150

seq1  GAATTCAAAGCTTACATAGACTTCTCATTTTAAGAGGGAGCATCTCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCTTACATAGACTTCTCATTTTAAGAGGGAGCATCTCTGGG  50

seq1  CTAGAGAGATGAATCATCTTTAAGAGGGCTTCCTAGCTTGTTAGAGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAGATGAATCATCTTTAAGAGGGCTTCCTAGCTTGTTAGAGGTCT  100

seq1  AGTTCCCAGTAAATAAATGGCTTATAACTGCTTATATCTCCAGCTTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCAGTAAATAAATGGCTTATAACTGCTTATATCTCCAGCTTCAGA  150

seq1  AGATAGGACACACTATCTGGACCACAGACATACACATGGCATATTCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGACACACTATCTGGACCACAGACATACACATGGCATATTCTGTT  200

seq1  GCTCTAATTCCCATACAAGTTTTTAAAATAAGATGCCCAATATTGGGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAATTCCCATACAAGTTTTTAAAATAAGATGCCCAATATTGGGCAA  250

seq1  ATACAATGAGGATTAGGACATAATGGAACAAAGTGCAGTATGAACTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATGAGGATTAGGACATAATGGAACAAAGTGCAGTATGAACTAGGA  300

seq1  ATTACTGTAGTGGGTATTTTCAAATATATTTTAAAACATTACTGTGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGTAGTGGGTATTTTCAAATATATTTTAAAACATTACTGTGCATG  350

seq1  GCTGTGAAGACAATATATGCCCTACATGTTAGCAAATCTTACAGAATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAAGACAATATATGCCCTACATGTTAGCAAATCTTACAGAATTGT  400

seq1  TAAGATCAGAATTACTTGTGTAAGTGGGTTTTTTTACTAACCATAATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCAGAATTACTTGTGTAAGTGGGTTTTTTTACTAACCATAATATC  450

seq1  ATTCAGGAGAAACACACCTACCCCATCACATACCCTTAGTGGAGAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGAGAAACACACCTACCCCATCACATACCCTTAGTGGAGAAGAAG  500

seq1  ATAATTTGAATCCCAGGCATAATCAAATTAGGATGGTGCTTAGCTTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTGAATCCCAGGCATAATCAAATTAGGATGGTGCTTAGCTTTAAA  550

seq1  AATTTTTTATTAAGATATGGTTATATCATGGAGGTACCCTTTCCAAGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTATTAAGATATGGTTATATCATGGAGGTACCCTTTCCAAGACC  600

seq1  CTACTCCTACTCCTTTTCAAATTCATGACCTTCTGTTCTTTAATTATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCCTACTCCTTTTCAAATTCATGACCTTCTGTTCTTTAATTATTAT  650

seq1  TGTTACATGTACACATGAACACACATAGACACACACACAAATAAATAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATGTACACATGAACACACATAGACACACACACAAATAAATAGAT  700

seq1  AAATGCAATCTACTAGATCTATTTAGTATTGCTTTTGTCTACATGGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAATCTACTAGATCTATTTAGTATTGCTTTTGTCTACATGGTTTT  750

seq1  AGAGCTGACTGCTAGGGATTTGGTTCAGTGGGTCAATTTCTGGACCAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGACTGCTAGGGATTTGGTTCAGTGGGTCAATTTCTGGACCAGAT  800

seq1  TATCTATTCTTTTCTCAGTGGTCTTTTATTTATCATATCCCTTCATCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATTCTTTTCTCAGTGGTCTTTTATTTATCATATCCCTTCATCTAA  850

seq1  GTATGAAGTCCCTAATATTATGTCTATTGGTAGCAAGTCTTACTTAGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTATGAAGTCCCTAATATTATGTCTATTGGTAGCAAGTCTTAC-TAGGCA  899

seq1  GCCATCTGTACTGTCATGGTGTTATGGTACCAGGGCAAAACTTC-TGTTG  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCCATCTGTACTGTCATGGTGTTATGGTACCAGGGCAAAACTTCTTGTTG  949

seq1  TTTCTAGAAACAAAATCTTGCAGCAGACTTTTTGGTCATTTTGCTCTTAT  999
      |||||||||   |||| |||||||||||||||||||||||||||||||||
seq2  TTTCTAGAA--CAAATTTTGCAGCAGACTTTTTGGTCATTTTGCTCTTAT  997

seq1  AATATTTCTATCCCCTCTTGCATGATGTTCCCT-GAGCTTTAGGTGCAGA  1048
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATATTTCTATCCCCTCTTGCATGATGTTCCCTGGAGCTTTAGGTGCAGA  1047

seq1  TATTATG-CTGTAGATATATTTGTAGTAATTGGAT  1082
      ||||||| |||||||||||||||||||||||||||
seq2  TATTATGCCTGTAGATATATTTGTAGTAATTGGAT  1082