BAC Information

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BAC

Clone NameB6Ng01-159N14
Chromosome6 (Build37)
Map Location 76,124,795 - 76,125,931
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145, EG546907
Downstream geneLOC100042952, LOC668153, EG668155, LOC100042956, Ctnna2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159N14.bB6Ng01-159N14.g
ACCDH953393DH953394
length1,2381,122
definitionDH953393|Mus musculus domesticus DNA, BAC clone: B6Ng01-159N14, 5' end.DH953394|Mus musculus domesticus DNA, BAC clone: B6Ng01-159N14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaactccagtccgctgcaaaataagcaaatgattttaactaccca
gccactttgctcccagtagttatctttggggaagaagaaaagaccttgaa
acttttcattattttgtttctgtgttttgttttcataagctatgtgtcac
ttaatttgagttcttaggtacatggtactttatcttttcaataacacatt
tttttatattttctctgaatgaattattattaatattcaaatttttaaaa
aatagaaagaaagaaatgttcaaaatgaaatgtcaatgaagaaaagtgaa
gagaaaagtgttttggacctagcactacgattaagaaaacaggacttgga
aatggagaatattgaagccagagtaagtacaaacattggagtagattttt
tcctgggcacacattatattaaatgcaatgaaatgttttaaattacaaag
ttactccacttccaaacatatcaccacataagagtaaaagaagagggaca
cagaataaaaaaagctgaagcaattggtatatgcctgtattgtcctaaag
tacagctctctgaccatttgattaaagattctgctataagacatgaagtt
tgtggaacatgatgactttggatctatttgcgttcttctccatgaagaca
tcagttagataagcaccattttttgaggatgatttctttttcccattgta
tggtttaggcttctctgtcaaaatcagatgttcataggtatgtgggttta
tttctggtatttctacttgattctactgaccttagattgaaatcacggat
ggtgataccaccagaagttcttttattgagcaggattatttttgatatcc
tcggatttttgtttttctatatgaagttgggaattgtttttcaaggtctg
gaaaaaattatgtttgtattttgatgagaattgaattgattctgtagatt
atttttggtagatggccatcctgcactattaataatactttgctatgctt
gcagacgaagtctaacatactgtgctcacagaggtccagcagctaatcat
aaaaacatgcagaagactctcaaacaaacatagatgagctccggagcatg
gtgcaggactgggagacaggtgaagaatcgaaaggatacggactctaaga
atcaatataagtcactacctgacctggatctcgaacttatcgcacatcaa
gagacctctctcggcgtgagctcccatagtctcacagt
gaattccattagttgctaaatttccttgattctttgaatattatatttca
ttctctgtcacaaaaaccctttacttcaaaaaagcctttgacatatcata
taaaaaaagggacaagtgacaaataatggacaattaaggaaaacaaaagc
aagaggaatccagtacatttgaagaaataacttaatgaaatacttatctt
ccacatacgcttcaggaaaagaggctatgaatatgggcaagaacctctag
agtttatgggaaaatatagaacctctgtaaggaatgcacaaaccctcctg
tatttatgattatattatagttagatttgtaagaaaataatcatgaggaa
ctacatactcattatttcaaaaaagaaaagagaaagggggagaaaacaga
gagaaaaattaattggtaaatcatctcatccattcagaagaagttcttta
aagtcatagaaagctatcagtcaagggaagaagacaatctcccaccagac
tctcattatgacggaattgaggagcaggaacttggatcactggtctgaga
agcaactggtatgctggtatttccaaatggaacactgcagatactctttt
attatactctttcatagaaacccttccattgcacatactcaacctgctca
taaaaattattacaaacttacatcttgcattttaggttcctactctgacc
atttggcggcacaacataacacaggagttagaaagatggctcagttggta
aattcacttttgaaaaagcctgttgtcttgagttaaatatctaggacctg
tatgatatagagataaccaacaccaacaaattggcctttggtatacacac
atatgctatggtacctgtagaaaaaaaaacatacctacaaacccagacac
acacacacacacacaaacactcaaaaaggatgaaaaatgaaataaacacc
aaatactaaacatagcagaatctcatcatctcaaatagataattatattt
attttcataacatatgtgagaggtgtctcagatggaggaaatttgtgtac
taggccagcagatgaggcaaatatgccacatttataattaacatctttag
cttaaatcaaggatgctatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_76124795_76125931
seq2: B6Ng01-159N14.g_70_1191

seq1  GAATTCCATTAGTTGCTAAATTTCCTTGATTCTTTGAATATTATATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTAGTTGCTAAATTTCCTTGATTCTTTGAATATTATATTTCA  50

seq1  TTCTCTGTCACAAAAACCCTTTACTTCAAAAAAGCCTTTGACATATCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTCACAAAAACCCTTTACTTCAAAAAAGCCTTTGACATATCATA  100

seq1  TAAAAAAAGGGACAAGTGACAAATAATGGACAATTAAGGAAAACAAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAGGGACAAGTGACAAATAATGGACAATTAAGGAAAACAAAAGC  150

seq1  AAGAGGAATCCAGTACATTTGAAGAAATAACTTAATGAAATACTTATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAATCCAGTACATTTGAAGAAATAACTTAATGAAATACTTATCTT  200

seq1  CCACATACGCTTCAGGAAAAGAGGCTATGAATATGGGCAAGAACCTCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATACGCTTCAGGAAAAGAGGCTATGAATATGGGCAAGAACCTCTAG  250

seq1  AGTTTATGGGAAAATATAGAACCTCTGTAAGGAATGCACAAACCCTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATGGGAAAATATAGAACCTCTGTAAGGAATGCACAAACCCTCCTG  300

seq1  TATTTATGATTATATTATAGTTAGATTTGTAAGAAAATAATCATGAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGATTATATTATAGTTAGATTTGTAAGAAAATAATCATGAGGAA  350

seq1  CTACATACTCATTATTTCAAAAAAGAAAAGAGAAAGGGGGAGAAAACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATACTCATTATTTCAAAAAAGAAAAGAGAAAGGGGGAGAAAACAGA  400

seq1  GAGAAAAATTAATTGGTAAATCATCTCATCCATTCAGAAGAAGTTCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAATTAATTGGTAAATCATCTCATCCATTCAGAAGAAGTTCTTTA  450

seq1  AAGTCATAGAAAGCTATCAGTCAAGGGAAGAAGACAATCTCCCACCAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATAGAAAGCTATCAGTCAAGGGAAGAAGACAATCTCCCACCAGAC  500

seq1  TCTCATTATGACGGAATTGAGGAGCAGGAACTTGGATCACTGGTCTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTATGACGGAATTGAGGAGCAGGAACTTGGATCACTGGTCTGAGA  550

seq1  AGCAACTGGTATGCTGGTATTTCCAAATGGAACACTGCAGATACTCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTGGTATGCTGGTATTTCCAAATGGAACACTGCAGATACTCTTTT  600

seq1  ATTATACTCTTTCATAGAAACCCTTCCATTGCACATACTCAACCTGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTCTTTCATAGAAACCCTTCCATTGCACATACTCAACCTGCTCA  650

seq1  TAAAAATTATTACAAACTTACATCTTGCATTTTAGGTTCCTACTCTGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTATTACAAACTTACATCTTGCATTTTAGGTTCCTACTCTGACC  700

seq1  ATTTGGCGGCACAACATAACACAGGAGTTAGAAAGATGGCTCAGTTGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCGGCACAACATAACACAGGAGTTAGAAAGATGGCTCAGTTGGTA  750

seq1  AATTCACTTTTGAAAAAGCCTGTTGTCTTGAGTTAAATATCTAGGACCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACTTTTGAAAAAGCCTGTTGTCTTGAGTTAAATATCTAGGACCTG  800

seq1  TATGATATAGAGATAACCAACACCAACAAATTGGCCTTTGGTATACACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATATAGAGATAACCAACACCAACAAATTGGCCTTTGGTATACACAC  850

seq1  ATATGCTATGGTACCTGTAG-AAAAAAAACATACCTACAAACACAGACAC  899
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  ATATGCTATGGTACCTGTAGAAAAAAAAACATACCTACAAACCCAGACAC  900

seq1  ACACACACACACACAAACACTCAAAAA-GATGAAAAATGAAATAAACACC  948
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACACACACACACACAAACACTCAAAAAGGATGAAAAATGAAATAAACACC  950

seq1  AAATACTTAAACATAGCAGAAATCTCATCATCTCAAAATAGATAATTATA  998
      |||||| |||||||||||| |||||||||||||| |||||||||||||||
seq2  AAATAC-TAAACATAGCAG-AATCTCATCATCTC-AAATAGATAATTATA  997

seq1  TTTATTTTTCATAACATATGTGAAGAAGTGTCTCAGGATTGGAGGAAATT  1048
      |||| ||||||||||||||||| ||| |||||||||   ||||||||| |
seq2  TTTA-TTTTCATAACATATGTG-AGAGGTGTCTCAG--ATGGAGGAAA-T  1042

seq1  TTGTGTAACTAGGCCAGCAAGATGAGGCAAATAATGCCACATTTAATAAT  1098
      |||||| ||||||||||| ||||||||||||| ||||||||||| |||||
seq2  TTGTGT-ACTAGGCCAGC-AGATGAGGCAAAT-ATGCCACATTT-ATAAT  1088

seq1  ATAAAACATCTTTAAGCCTAAAAATCAAGGATGCT-TATT  1137
          ||||||||| ||| |  |||||||||||||| ||||
seq2  ---TAACATCTTT-AGCTT--AAATCAAGGATGCTATATT  1122