BAC Information

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BAC

Clone NameB6Ng01-161G13
Chromosome6 (Build37)
Map Location 131,505,367 - 131,506,539
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik
Downstream geneLOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161G13.bB6Ng01-161G13.g
ACCDH954527DH954528
length1,1311,197
definitionDH954527|Mus musculus domesticus DNA, BAC clone: B6Ng01-161G13, 5' end.DH954528|Mus musculus domesticus DNA, BAC clone: B6Ng01-161G13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtagtcagtctttgttttgctgagtcatcttgtctgtctcta
ccttcaaattcttggtcgtcctcctcaaacgtcctcagtttctcaagtgc
acacccagtttctgaaggaatttgttcaagtagaactctacaacatctgt
caatacaaaaatgagagaaagtgtaaaacttgctataaaagtacatatgc
aataaattcaaaatgaggtaaaacttcagtggtggtgcagaactcactgt
cagctctatgaagtcaagaagtattgctgggtgtggtagtgcatacctgt
agtcagtcctaacactcggcgggtagaggtaggaattcgaagtcattctc
agctacacaacgatttagaagccagcctaggctagaagaaatcttgtgtc
aaagtcaaatgagcaacatcaaaataaagcattacaaatacctattgcta
cagcagtgttacttggtatctgctatgtaaaagatgtgaacaataaattc
tgtgaaataaaaactgcaagaataataagttaaagtgtagaatttgtatg
tggttgaaactaagctgatgcttctcgacttatacgggggttagaccctg
acaaaaccacaggaggtctaaaaatagagtacgtttacatgtgtataagc
tcggcaactatcatagtgaagcaacacaacaccctgtagtgttgtaaatt
gtctccatgactaggaactttaactccctgaggctgcccaccttcaagca
ccacattgggaaacgtcacagtgtaatttgtgcacctagcatcccagtac
agttggacctgtagctgaagtccttataagtcaaagctgtttgtaaatta
ttgcaagatatatccaatatatataaagacttaagaagatgggactccag
aaatcaaatggggtacagagctaagaaagattctcaactgaggaatatca
atggctgagaacatccgaaaaacattcagatccttattcatcaggaattc
aatcaagcatgctgacttcacctcaaccagtcagatgctagatcaaaatc
gatgacgcgatgtgcagatgtgaagaaaggaactcctcaattgttgcgat
gcaactgtaagcactctgcaatcagctggcg
gaattctcacccgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcaaaatgagtaagatcaaaaattcaggtgacagc
agatgctggcgagaatgtggagaaagcggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaatacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttatacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
ggaactcaaatgatatgtactcactgataagtggatattagcccagaaac
ttagtatatcgagatataaggtacaatttgcaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggacactttgccccttcttagaattggaaa
taatcacccatggaagaagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatatccagggatccatcccataatta
gcctccaaaacgatgacaccattgcattatactagtaagcgtttgatgca
agtaccgtgaaaataactgtctttttgtgaagactaggccggggcctaag
aaaaccagaaaggggatgctcccagtcaactatttggagggttacacagt
ggccccaattggaggagctagaagaaagtacccaaggagctaaggagatt
ctgcaacccttgtaggtccaacattatgaactaaccagtaccctggagtc
tcttgacctctagctgcattgtatcaaagaatgctattcagcatccctgg
taagagaagccattgaacaggccaacttatgtccagttcaggtaacgcag
gtcaacaataaaagaaaaaaggaatagttgcgtaaaggaaagtgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_131505367_131506539
seq2: B6Ng01-161G13.b_46_1176 (reverse)

seq1  CGCCAGACTGATTTGCAGAGTGGCTGTACCAGTTTGCAATTCCGCCAACA  50
      |||||| |||| ||||||||| ||| || ||| |||||  ||   |||||
seq2  CGCCAG-CTGA-TTGCAGAGT-GCT-TA-CAG-TTGCA--TC--GCAACA  40

seq1  ATGGAGGAGTGTCCCTCTTTCTCCACATCCTTGCCAACATCTGCTGTCAT  100
      || ||||||| ||   |||||| ||||||  |||  ||||| || |||||
seq2  ATTGAGGAGT-TC---CTTTCTTCACATC--TGC--ACATC-GC-GTCAT  80

seq1  CTGAATTTTTGATCTTAGCCATTCTGACTGGTTTGAGGTGGAATGTCAGC  150
      | ||  |||||||| ||||   ||||||||| ||||||||  | ||||||
seq2  C-GA--TTTTGATC-TAGC--ATCTGACTGG-TTGAGGTG--AAGTCAGC  121

seq1  ATTGCTTTGATTTGTATTTCCCTGATGAATAAGGATCTTGAATGTTTTTT  200
      | ||| |||| ||| |||  ||||||||||||||||| |||||| |||||
seq2  A-TGC-TTGA-TTGAATT--CCTGATGAATAAGGATC-TGAATG-TTTTT  164

seq1  CGGATGTTTCTCAGCCATTTGATATTCCTCAGTTGAGAATTCTTTCTTTA  250
      |||||| |||||||||| ||||||||||||||||||||| |||||| |||
seq2  CGGATG-TTCTCAGCCA-TTGATATTCCTCAGTTGAGAA-TCTTTC-TTA  210

seq1  GCTCTGTACCCCATTTGATTTTCTGGAGT-CCATCTTCTTAAGTTCTTTA  299
      |||||||||||||||||| |||||||||| ||||||||||||| ||||||
seq2  GCTCTGTACCCCATTTGA-TTTCTGGAGTCCCATCTTCTTAAG-TCTTTA  258

seq1  TATATATTGGATATTATCTTGCAATAATTTACAAACAGCTTTGACTTATA  349
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TATATATTGGATA-TATCTTGCAATAATTTACAAACAGCTTTGACTTATA  307

seq1  AGGACTTCAGCTACAGGTCCAACTGTACTGGGATGCTAGGTGCACAAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTCAGCTACAGGTCCAACTGTACTGGGATGCTAGGTGCACAAATT  357

seq1  ACACTGTGACGTTTCCCAATGTGGTGCTTGAAGGTGGGCAGCCTCAGGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGACGTTTCCCAATGTGGTGCTTGAAGGTGGGCAGCCTCAGGGA  407

seq1  GTTAAAGTTCCTAGTCATGGAGACAATTTACAACACTACAGGGTGTTGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGTTCCTAGTCATGGAGACAATTTACAACACTACAGGGTGTTGTG  457

seq1  TTGCTTCACTATGATAGTTGCCGAGCTTATACACATGTAAACGTACTCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCACTATGATAGTTGCCGAGCTTATACACATGTAAACGTACTCTA  507

seq1  TTTTTAGACCTCCTGTGGTTTTGTCAGGGTCTAACCCCCGTATAAGTCGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGACCTCCTGTGGTTTTGTCAGGGTCTAACCCCCGTATAAGTCGA  557

seq1  GAAGCATCAGCTTAGTTTCAACCACATACAAATTCTACACTTTAACTTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATCAGCTTAGTTTCAACCACATACAAATTCTACACTTTAACTTAT  607

seq1  TATTCTTGCAGTTTTTATTTCACAGAATTTATTGTTCACATCTTTTACAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTGCAGTTTTTATTTCACAGAATTTATTGTTCACATCTTTTACAT  657

seq1  AGCAGATACCAAGTAACACTGCTGTAGCAATAGGTATTTGTAATGCTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATACCAAGTAACACTGCTGTAGCAATAGGTATTTGTAATGCTTTA  707

seq1  TTTTGATGTTGCTCATTTGACTTTGACACAAGATTTCTTCTAGCCTAGGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATGTTGCTCATTTGACTTTGACACAAGATTTCTTCTAGCCTAGGC  757

seq1  TGGCTTCTAAATCGTTGTGTAGCTGAGAATGACTTCGAATTCCTACCTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCTAAATCGTTGTGTAGCTGAGAATGACTTCGAATTCCTACCTCT  807

seq1  ACCCGCCGAGTGTTAGGACTGACTACAGGTATGCACTACCACACCCAGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGCCGAGTGTTAGGACTGACTACAGGTATGCACTACCACACCCAGCA  857

seq1  ATACTTCTTGACTTCATAGAGCTGACAGTGAGTTCTGCACCACCACTGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCTTGACTTCATAGAGCTGACAGTGAGTTCTGCACCACCACTGAA  907

seq1  GTTTTACCTCATTTTGAATTTATTGCATATGTACTTTTATAGCAAGTTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACCTCATTTTGAATTTATTGCATATGTACTTTTATAGCAAGTTTT  957

seq1  ACACTTTCTCTCATTTTTGTATTGACAGATGTTGTAGAGTTCTACTTGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTCTCTCATTTTTGTATTGACAGATGTTGTAGAGTTCTACTTGAA  1007

seq1  CAAATTCCTTCAGAAACTGGGTGTGCACTTGAGAAACTGAGGACGTTTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCCTTCAGAAACTGGGTGTGCACTTGAGAAACTGAGGACGTTTGA  1057

seq1  GGAGGACGACCAAGAATTTGAAGGTAGAGACAGACAAGATGACTCAGCAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACGACCAAGAATTTGAAGGTAGAGACAGACAAGATGACTCAGCAA  1107

seq1  AACAAAGACTGACTACTGGAATTC  1173
      ||||||||||||||||||||||||
seq2  AACAAAGACTGACTACTGGAATTC  1131