BAC Information

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BAC

Clone NameB6Ng01-164B03
Chromosome6 (Build37)
Map Location 132,076,345 - 132,077,565
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600
Downstream genePrb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164B03.bB6Ng01-164B03.g
ACCDH956495DH956496
length1,189941
definitionDH956495|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B03, 5' end.DH956496|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacactcaattccaaatttatgaacatctcagaagcaagagcaaa
ttctgcttggtggatgcatgagttattgttggaaatcagattttcctctc
atgtatttgtgtgacctcgaaatgtcataacaagtttttttgttttcttt
ttgaacatcaatgactgtcattctgtgaaacacttaggtaaatcccaata
tatcacatgtgtgcctgcttcacttcctttgcatcaggaaaaaaatttag
ttctataatctcattatcatcattatcattttaattatcataaactgcac
caccagcagctcttttgtttgaattttgtttttctgctgatttttttttg
ggttattgttttactattttccaagtaatgagaggtagtcattgagagtg
caatgggatgtcttctttagtttctttttgtaccttttgagagagagtct
ttgagtaaacctgtcaacatttattatttcagataaatagaatggtgagt
tatttcctgtgatccaactgcctctacctcttattgttgaggttacagag
atgtgctgccactttagtttcttaggagtaaggtccaaaatcacgtgctc
aagcttgcatataaacacttttggccagtgagtaattttccaatccacac
tctatcactctttataaaacctgagtataatctaactttttagttacatt
caatgaacagacatcaaattaatatagctgtcatcaatatacataaatcc
agaatatattaaattttaagaaattttatagaagttcacaacattttatt
tcacatacatgtataatataaattcaataatagttctcatttttattgtt
aggccaacataaatatgatttatctcttttgattaaggctctcatttttc
tcccaagttctccagtaacaggagacatctcatactcagtttacttagga
attagacttcaggtctatttcaatgtgccagtgatctaataaattatgtc
attcttatcacaatatagggattttagggatgttccctcatcctctggga
ctttcaaactagttgagtaaaaaaaaataagaatagattatgccgatagt
taagtattcaagatcttttcctttgtctgttggtttgttttgtatggttg
gtttttcaagaccgttctctgtatagcctgctgtctgaa
gaattccccttaaagagatagccccactggccatctatcccttgcttcag
ggaagatgagcggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgtgttttgtctttggcacatgtgttaggtgcagagtgtgcggcccgc
actttcgccatggtagcgtaggcttttgctgcagtggaggcgggacaatc
tcctcagattcggtttgccgctctaaaagaaattatgttgcgttatgccg
tggggtgtgaggctaagcactgcacagaggatagcttgctgttggcatcc
tgtggaaggcacgtctgattgcatgaaggttcagtgtcctagttcccttc
ccccaggaaaaacgacacgggagctggccaagacttctctgggtgatgag
cctaagtgatggttttgtgtagggcccctatgcttgcacactggggatca
gacctctaccttcacccatgaggcttgcttgcagcaattaagatctggcc
ataagttaattaacatcctggccttttgatgcacctgctgcaagcaaaac
acaatctccccaggagtggcttggcatgattgagaggtagtcagtgataa
gactccctgggcatgtcaccaacctaatacagggatcaaaccaatgctgt
ttgtctcccaaagacaggtaaggggcatggttgcgaggggctatctacag
acattctctctgccaaaaaagaaaaaagggggaattgtggggagcgggtg
tggcggcagtcccaaaggcgccaggggactgcagctaataaatatgactt
gcacctgacttcctcatataagacacaaacatcttgagttgctgcgcagt
gtaccaggatacaggtgaattcaatttggtggaagtttgcccctgctgcc
ctgattacttaaagctctgactggttagggggcttggcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132076345_132077565
seq2: B6Ng01-164B03.b_45_1233

seq1  GAATTCACACTCAATTCCAAATTTATGAACATCTCAGAAGCAAGAGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTCAATTCCAAATTTATGAACATCTCAGAAGCAAGAGCAAA  50

seq1  TTCTGCTTGGTGGATGCATGAGTTATTGTTGGAAATCAGATTTTCCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTGGTGGATGCATGAGTTATTGTTGGAAATCAGATTTTCCTCTC  100

seq1  ATGTATTTGTGTGACCTCGAAATGTCATAACAAGTTTTTTTGTTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTGTGTGACCTCGAAATGTCATAACAAGTTTTTTTGTTTTCTTT  150

seq1  TTGAACATCAATGACTGTCATTCTGTGAAACACTTAGGTAAATCCCAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACATCAATGACTGTCATTCTGTGAAACACTTAGGTAAATCCCAATA  200

seq1  TATCACATGTGTGCCTGCTTCACTTCCTTTGCATCAGGAAAAAAATTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACATGTGTGCCTGCTTCACTTCCTTTGCATCAGGAAAAAAATTTAG  250

seq1  TTCTATAATCTCATTATCATCATTATCATTTTAATTATCATAAACTGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAATCTCATTATCATCATTATCATTTTAATTATCATAAACTGCAC  300

seq1  CACCAGCAGCTCTTTTGTTTGAATTTTGTTTTTCTGCTGATTTTTTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCAGCTCTTTTGTTTGAATTTTGTTTTTCTGCTGATTTTTTTTTG  350

seq1  GGTTATTGTTTTACTATTTTCCAAGTAATGAGAGGTAGTCATTGAGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTGTTTTACTATTTTCCAAGTAATGAGAGGTAGTCATTGAGAGTG  400

seq1  CAATGGGATGTCTTCTTTAGTTTCTTTTTGTACCTTTTGAGAGAGAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGATGTCTTCTTTAGTTTCTTTTTGTACCTTTTGAGAGAGAGTCT  450

seq1  TTGAGTAAACCTGTCAACATTTATTATTTCAGATAAATAGAATGGTGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTAAACCTGTCAACATTTATTATTTCAGATAAATAGAATGGTGAGT  500

seq1  TATTTCCTGTGATCCAACTGCCTCTACCTCTTATTGTTGAGGTTACAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTGTGATCCAACTGCCTCTACCTCTTATTGTTGAGGTTACAGAG  550

seq1  ATGTGCTGCCACTTTAGTTTCTTAGGAGTAAGGTCCAAAATCACGTGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTGCCACTTTAGTTTCTTAGGAGTAAGGTCCAAAATCACGTGCTC  600

seq1  AAGCTTGCATATAAACACTTTTGGCCAGTGAGTAATTTTCCAATCCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGCATATAAACACTTTTGGCCAGTGAGTAATTTTCCAATCCACAC  650

seq1  TCTATCACTCTTTATAAAACCTGAGTATAATCTAACTTTTTAGTTACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCACTCTTTATAAAACCTGAGTATAATCTAACTTTTTAGTTACATT  700

seq1  CAATGAACAGACATCAAATTAATATAGCTGTCATCAATATACATAAATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAACAGACATCAAATTAATATAGCTGTCATCAATATACATAAATCC  750

seq1  AGAATATATTAAATTTTAAGAAATTTTATAGAAGTTCACAACATTTTA-T  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGAATATATTAAATTTTAAGAAATTTTATAGAAGTTCACAACATTTTATT  800

seq1  TCACATACATGTATAATATAAATTCAATAATAGTTCTCATTTTTATTGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACATGTATAATATAAATTCAATAATAGTTCTCATTTTTATTGTT  850

seq1  AGGCCAACATAAATATGATTTATCTCTTTTGATTAAGGCTCTCATTTTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAACATAAATATGATTTATCTCTTTTGATTAAGGCTCTCATTTTTC  900

seq1  TCCCCAAGTTCTCCAGTAACAGGAGACATCTCATACTCAGTTTACTTAGG  949
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-CCCAAGTTCTCCAGTAACAGGAGACATCTCATACTCAGTTTACTTAGG  949

seq1  AATTTAGACTTCAGGTCTATTTCAATGTTGCCAGTGATCTTAATAAATTT  999
      || |||||||||||||||||||||||| ||||||||||| ||||||| ||
seq2  AA-TTAGACTTCAGGTCTATTTCAATG-TGCCAGTGATC-TAATAAA-TT  995

seq1  ATGTCATTCTTATCACAATTATAGGGATCTTTAGGGATGTTCCCTTCATC  1049
      |||||||||||||||||| ||||||||| ||||||||||||||| |||||
seq2  ATGTCATTCTTATCACAA-TATAGGGAT-TTTAGGGATGTTCCC-TCATC  1042

seq1  CTCTGGAACTTTCAAAACTAGTTGAAGTAAAAAAAAAATTAGAATAGATT  1099
      |||||| |||||| |||||||||| ||| |||||||||| ||||||||||
seq2  CTCTGGGACTTTC-AAACTAGTTG-AGT-AAAAAAAAATAAGAATAGATT  1089

seq1  ATGCCGATAGTTTAAGTATTTCAAGATTCTTTTTCTTT-TGTCTTGTTTT  1148
      |||||||||| ||||||| ||||||| |||||| |||| | | ||| |||
seq2  ATGCCGATAG-TTAAGTA-TTCAAGA-TCTTTTCCTTTGTCTGTTGGTTT  1136

seq1  GTTTTGTTTTTGTTTTTGTTTTGGGTTTTTTTTCCAAGACCGGGTTTCTC  1198
      ||||||| |              ||||  |||| ||||||||   |||||
seq2  GTTTTGTAT--------------GGTTGGTTTTTCAAGACCG---TTCTC  1169

seq1  TGTATAGCACTGGCTGTCCTGAA  1221
      |||||||| || ||||| |||||
seq2  TGTATAGC-CT-GCTGT-CTGAA  1189