BAC Information

Click to search

BAC

Clone NameB6Ng01-173P24
Chromosome6 (Build37)
Map Location 102,626,097 - 102,626,809
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666084, Cntn3, EG666123
Downstream geneChl1, LOC666141
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173P24.bB6Ng01-173P24.g
ACCGA002196GA002197
length716894
definitionB6Ng01-173P24.b B6Ng01-173P24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagagggagtaaaggtatacaggaggagatgagggagagagaaa
gtactgaaagtgatataaatagagtgcacttatatacgacattctaagta
aaaattaaaaatattttaagggatgcacatattgaggttgcttagtaagt
aaaggcacatgccactcagtttgaaaacctgatcaatacaagggatgtgt
tgagttccaaatacagtatctacataatagaaggagaaagccaagtcttt
caagttgtcctctcacctccatacatgatatgtgggatgtgtgaccctcc
caaataaataataactgtaaaaaatgaaagtagttcaattcccatgactg
ttttagtcaccttagacattttgcatattatatactttgcacatatcata
aagtagttcttatctttatttaaaattatgatgtttgtgaaagctgcatt
tacatttttaaaaaacacattgttaaagaggcatacagtgcaaatacatt
ctttacatagtggtataattgtatttctgaaaatttgtcacttttgtagt
cttatgtgttttagcttatacatttaacatgattatgaatagcattttga
cacaggaaaacaaaaatagaaagaatccactattgccctaaagcagcatt
atttttagtgagagattatatttctaactacaaagcaatgtaaattttca
aattctatactatcat
gaattcctttatccacttaaatttgaccttagtacaagaagataaaaatg
gatcaattcgaattcttctacatgataacccccagttgtgccagcaccat
ttgttgaagatgctgtcttttatctactggatggtttttgctgccttgtc
aaagatcaagtgaccataggtgtgtgggttcatttctgggtcttcaattc
tattccattggtctacttgtctgtcagtataccagtaccatgcagttttt
aatcacaattgctctgtagtacagctttaggtcaggcatggtgattccaa
cagaggttcttttatccttgagaagagtttttgctatcctaggttttttg
ttattccagatgaatttgtcgattgccctttctaattcgttgaagaattg
aattggaatttttatggggattgcattgaatctgtagattacttttggaa
agatagccatttttactatattgatcctgccaatccatgagcatgggaga
tccttccatcttctgagatcttctttaatttctttcttcagagacttgaa
ggtcttctcatactgatctttcacttacgccaaggtattttatattattt
gtgactattgagaagggtgttgtttccctaatttctttctcagcctgttt
attctttgtgtagagaaaggccattgacttgttttgagttaattttatat
cccagctacttcaccgaagctgtttatcggtttaggagttctctggtgga
atttttagggtcacttatacatacatatcgtatatataaaatgatataac
atatcatctgcaaaaaagtggttatttttgacttcattcttttccatatt
tgtaacccccttgatcttcttttttgttgtcctaaattggctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_102626097_102626809
seq2: B6Ng01-173P24.b_47_762

seq1  GAATTCCAGAGGGAGTAAAGGTATACAGGAGGAGATGAGGGAGAGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGGGAGTAAAGGTATACAGGAGGAGATGAGGGAGAGAGAAA  50

seq1  GTACTGAAAGTGATATAAATAGAGTGCACTTATATACAACATTCTAAGTA  100
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTACTGAAAGTGATATAAATAGAGTGCACTTATATACGACATTCTAAGTA  100

seq1  AAAATTAAAAATATTTTAAGGGATGCACATATTGAGGTTGCTTAGTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAAAATATTTTAAGGGATGCACATATTGAGGTTGCTTAGTAAGT  150

seq1  AAAGGCACATGCCACTCAGTTTGAAAACCTGATCAATACAAGGGATGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCACATGCCACTCAGTTTGAAAACCTGATCAATACAAGGGATGTGT  200

seq1  TGAGTTCCAAATACAGTATCTACATAATAGAAGGAGAAAGCCAAGTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCCAAATACAGTATCTACATAATAGAAGGAGAAAGCCAAGTCTTT  250

seq1  CAAGTTGTCCTCTCACCTCCATACATGATATGTGGGATGTGTGACCCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGTCCTCTCACCTCCATACATGATATGTGGGATGTGTGACCCTCC  300

seq1  CAAATAAATAATAACTGTAAAAAATGAAAGTAGTTCAATTCCCATGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAATAATAACTGTAAAAAATGAAAGTAGTTCAATTCCCATGACTG  350

seq1  TTTTAGTCACCTTAGACATTTTGCATATTATATACTTTGCACATATCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTCACCTTAGACATTTTGCATATTATATACTTTGCACATATCATA  400

seq1  AAGTAGTTCTTATCTTTATTTAAAATTATGATGTTTGTGAAAGCTGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTTCTTATCTTTATTTAAAATTATGATGTTTGTGAAAGCTGCATT  450

seq1  TACATTTTTAAAAAACACATTGTTAAAGAGGCATACAGTGCAAATACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTTAAAAAACACATTGTTAAAGAGGCATACAGTGCAAATACATT  500

seq1  CTTTACATAGTGGTATAATTGTATTTCTGAAAATTTGTCACTTTTGTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACATAGTGGTATAATTGTATTTCTGAAAATTTGTCACTTTTGTAGT  550

seq1  CTTATGTGTTTTAGCTTATACATTTAACATGATTATGAATAGCATTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTGTTTTAGCTTATACATTTAACATGATTATGAATAGCATTTTGA  600

seq1  CACAGGAAAACAAAAATAGAAAGAATCCACTATTGCCCTAAAGCAGCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAAAACAAAAATAGAAAGAATCCACTATTGCCCTAAAGCAGCATT  650

seq1  A-TTTTAGTGAGAGATTATATTTCTAACTACAAAGCAATGTAAATTT--C  697
      | |||||||||||||||||||||||||||||||||||||||||||||   
seq2  ATTTTTAGTGAGAGATTATATTTCTAACTACAAAGCAATGTAAATTTTCA  700

seq1  AATTCTATACTATCAT  713
      ||||||||||||||||
seq2  AATTCTATACTATCAT  716