BAC Information

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BAC

Clone NameB6Ng01-174G20
Chromosome6 (Build37)
Map Location 10,331,784 - 10,332,842
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174G20.bB6Ng01-174G20.g
ACCGA002512GA002513
length1,0401,173
definitionB6Ng01-174G20.b B6Ng01-174G20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaatccactacccacaaccgggtggagattccctgcttcttcag
aaaacacgtccggagcagagattccattctctactacagacttcatagat
tcagagaagttcttgtaggttgcctcagccacacccttattccatcacta
tctacatctctgcaaccctatcttcaggaccttgcccttgccctaatact
tgcattgacaagcacataaacttcccactctactagagaccttacatact
gggataagtccttcccccaccaaactctcctactctctcaccagatctct
cagtctcttgccatcctagttgacttaacctggcctccaactgtgtcaga
ggcttcctattctaccagagactacatggattaggagaaacccagatagg
ctgtttgccagccaaactccctactctatcactatctcttagtctctaca
tcctattgccagtgctgaaccatcctaattgcctttcaccaccctacagc
tggtagaggaacactagggtctaccaaaaacacacacagactgtacaccc
aggctacacagatcagaagaacaaagaggaaacagaaaataaggggggaa
acatccatccatcaaagataaactccaaaatctgtaactagtctcttaat
catccctaaaccagattatctacagtctttgtatgaacacaagcaaaaaa
catccaatatataatgatactacatgaactcacctatcctactactgcaa
gtctggaatattctaacattacagaagaaaaagaaagggccgtaaatcaa
tttaaaatatgattgaggtccttaaagtatgtacaagtaagtcccttaaa
taagccctaaaaaacaaaacaagatttgaagaaaatgaataaactgttta
aaattgaaattgaataaaacaatagcacatacaagaaacacaactgaaga
atcctggaaattaagctaggtatgtgtagagatcagagatagcatcccaa
acagagtatgatagaaaaaattcccaggcattgaaatata
gaattctggagagagcatacactagcagcttggccacatacctgaaagct
ctggaagaaaaggaagcaaattcacccaagagatgtagacagcaggaaat
aatcaaactcaggcatgaattcaaccaaatagaaacaaaaagaactatac
aaagaatcagccaaacaaggaactggatctttgagaaaatcaacaagata
gataaacccttcgccaaactatctagagggtacagggacaatatcctaat
taataaaatccgaaatgaaaagggagacataacaacagaatttcaggaaa
tcaaaaatatcatcatatcctactacaaaagcctatactcattataactg
gaaaaacctggatgaaatgggcaattttctagacagataccaggaaagaa
agttaaatcaggatcagattaacaatctaaacattcccatatcccctaaa
gaaatacaaacagtcagtaatattctcccaacaaacaaacaaacaagcaa
acaaacaaacaaacaaaatcccaggaccagatgggtttagtgcaaagttc
tatcagaccttcaaagcagacctaattccaattgtcctcaagctattcca
agaaatagaaacagaaggtactctacccaattcgatctatgaagccacaa
ttattctgatacctaaaccacacaaagaccgaacaaagaaagagaacttc
agaccaaattcctttaggaatatagatgcaaaaatactcaataaaattcc
tgcaaacagaatcaaagaacacatgaaaacaaccatccatcctaattaag
taggcttcatctcagggatacagggattgttcaatatattcatcaatgta
atcccatatataaacaaacataaagaaaaaaaaatctcatgatcatctca
ttagatgctgagaaagcatttgagaaaatccaacacctaacacccttttc
atgataaaagtcttggaaagatcaggaattcaaaggcccatacctaaaca
ttataaaaagcatatactgcaaaccagtagccatatcaaactaaaaggag
gagaattcttgagcattccattaaattcaggactagaacagctgccaatt
ctttttctacctgttcaataggaattggagttctagccggaatcaagtta
gacacttaaggggagatctcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10331784_10332842
seq2: B6Ng01-174G20.b_46_1085

seq1  GAATTCCAATCCACTACCCACAACCGGGTGGAGATTCCCTGCTTCTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATCCACTACCCACAACCGGGTGGAGATTCCCTGCTTCTTCAG  50

seq1  AAAACA-GTCCGGAGCAGAGATTCCATTCTCTACTACAGACTTCATAGAT  99
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACGTCCGGAGCAGAGATTCCATTCTCTACTACAGACTTCATAGAT  100

seq1  TCAGAGAAGTTCTTGTAGGTTGCCTCAGCCACACCCTTATTCCATCACTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAGTTCTTGTAGGTTGCCTCAGCCACACCCTTATTCCATCACTA  150

seq1  TCTACATCTCTGCAACCCTATCTTCAGGACCTTGCCCTTGCCCTAATACT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATCTCTGCAACCCTATCTTCAGGACCTTGCCCTTGCCCTAATACT  200

seq1  TGCATTGACAAGCACATAAACTTCCCACTCTACTAGAGACCTTACATACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGACAAGCACATAAACTTCCCACTCTACTAGAGACCTTACATACT  250

seq1  GGGATAAGTCCTTCCCCCACCAAACTCTCCTACTCTCTCACCAGATCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAAGTCCTTCCCCCACCAAACTCTCCTACTCTCTCACCAGATCTCT  300

seq1  CAGTCTCTTGCCATCCTAGTTGACTTAACCTGGCCTCCAACTGTGTCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTTGCCATCCTAGTTGACTTAACCTGGCCTCCAACTGTGTCAGA  350

seq1  GGCTTCCTATTCTACCAGAGACTACATGGATTAGGAGAAACCCAGATAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCTATTCTACCAGAGACTACATGGATTAGGAGAAACCCAGATAGG  400

seq1  CTGTTTGCCAGCCAAACTCCCTACTCTATCACTATCTCTTAGTCTCTACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGCCAGCCAAACTCCCTACTCTATCACTATCTCTTAGTCTCTACA  450

seq1  TCCTATTGCCAGTGCTGAACCATCCTAATTGCCTTTCACCACCCTACAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTGCCAGTGCTGAACCATCCTAATTGCCTTTCACCACCCTACAGC  500

seq1  TGGTAGAGGAACACTAGGGTCTACCAAAAACACACACAGACTGTACACCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAGGAACACTAGGGTCTACCAAAAACACACACAGACTGTACACCC  550

seq1  AGGCTACACAGATCAGAAGAACAAAGAGGAAACAGAAAATAAGGGGGGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTACACAGATCAGAAGAACAAAGAGGAAACAGAAAATAAGGGGGGAA  600

seq1  ACATCCATCCATCAAAGATAAACTCCAAAATCTGTAACTAGTCTCTTAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCATCCATCAAAGATAAACTCCAAAATCTGTAACTAGTCTCTTAAT  650

seq1  CATCCCTAAACCAGATTATCTACAGTCTTTGTATGAACACAAGCAAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTAAACCAGATTATCTACAGTCTTTGTATGAACACAAGCAAAAAA  700

seq1  CATCCAATATATAATGATACTACATGAACTCACCTATCCTACTACTGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAATATATAATGATACTACATGAACTCACCTATCCTACTACTGCAA  750

seq1  GTCTGGAATATTCTAACATTACAGAAGAAAAAGAAAGGGCCGTAAATCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGAATATTCTAACATTACAGAAGAAAAAGAAAGGGCCGTAAATCAA  800

seq1  TTTAAAATATGATTGAGGTCCTTAAAGTATGTACAAGTAAGTCCCTTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATATGATTGAGGTCCTTAAAGTATGTACAAGTAAGTCCCTTAAA  850

seq1  TAAGCCCTAAAAAAACAAAACAAAGATTTGAAGAAAATGAATAAAACTGT  899
      |||||||| |||||||||||| |||||||||||||||||||| |||||||
seq2  TAAGCCCT-AAAAAACAAAAC-AAGATTTGAAGAAAATGAAT-AAACTGT  897

seq1  TTAAAAATTGAAAATTGAAATAAAAACAATAGCAACATACAAGAAAACAC  949
      || ||||||| ||||||||   ||||||||||| ||||||||| ||||||
seq2  TT-AAAATTG-AAATTGAA--TAAAACAATAGC-ACATACAAG-AAACAC  941

seq1  AAACTGAAAGAATCCTGGAAATTAAAGCTAGGTATGTGTAGAAGAATCAG  999
       ||||| |||||||||||||||| ||||||||||||||||||   |||||
seq2  -AACTG-AAGAATCCTGGAAATT-AAGCTAGGTATGTGTAGA--GATCAG  986

seq1  AGATAAGCATCCCAAACAGAAGGTAATGAATAGAAAAAAATTCCCAGGCA  1049
      |||| |||||||||||||||  || ||| |||| ||||||||||||||||
seq2  AGAT-AGCATCCCAAACAGA--GT-ATG-ATAG-AAAAAATTCCCAGGCA  1030

seq1  TTGAAATATA  1059
      ||||||||||
seq2  TTGAAATATA  1040