BAC Information

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BAC

Clone NameB6Ng01-180E07
Chromosome6 (Build37)
Map Location 131,670,856 - 131,671,473
singlet/doubletsinglet
Overlap genenone
Upstream geneEG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
Downstream geneLOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180E07.bB6Ng01-180E07.g
ACCGA006753GA006754
length1,0241,200
definitionB6Ng01-180E07.b B6Ng01-180E07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgatatcttgaatcttaattcctaatattctaattccttcag
agaaagcctaaacacagcctaaagctacatcatcaaggctttgatcattg
ttaataattatcaaaaattcttaaatttacataaactctatgagtcccag
atcaacagtcccagcacccacttccttagagcagaactaagcacaaagca
aaaacacaatcccttatagttttccacagcctgtaaacagttattccagt
tttctgatacagcagaaagcagtctttagtaactgtttccatgtaagaat
agaaaaatgacaaactactacaactaaaatgatttattacaacattttga
atgtatataagtaaaactgtaaaacagttacctctttctaatatctttcc
aggcaatgttatcttcagttctttaatcagatagaaatacagagcactaa
attttatatgcttctatatcatcttttaattctttaatcttcatttcctt
atcctagccattccatagcctcatgtactctacttctaatactatttatt
cctaatagatagatagatagatagatagatagatagatagagatatccat
accctttcttcttgaaatcactctctctctttatcgttaatgtccttggc
taacaaatgcagcagtaaccaagccagagaatacacatgctcccccatga
ttccaaattctaggccacatctggcaatgaaccatttacaaaaaggacca
tgtaagtattttatggcacttatgattaaattgttctttcccatgtccct
gaaggccacgtggagggcctgttcctcatcctccacagcctcacgaccat
ctccattccttaaaactgcagctgcttcatttactctggcatgaacagct
ctgagtaattgaggaagaatattcccagaaagaaagattgaaagtagagt
agtaaagagagtaggtgaactttgatgcaaaaaaccgtcagcaaatgtgg
gggggcatggataaatggcctgct
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacaaagtaataccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatgcaatttactaaacacatgaaactcaag
aaaaatgaagactgaagtgtagacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaaatttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatctaccctataatc
agcatccacccgttgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtatccaaggagctaaagggatctgcaaccct
ataggtggatcaacattatgaactaccagtacccccggagcttcttgact
ctagctgcatatatatcaaaggatggcctagtcgtcatcactgaagagaa
ggtccattggaacgcaaacctttaatgccccaagttacaggtacgcagtc
aatgggagtgcggttaggcatgccagaggtgatatagtggcgtcacatct

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_131670856_131671473
seq2: B6Ng01-180E07.b_42_659 (reverse)

seq1  ATTTCAAGAAGAAAGGGTATGGATATCTCTATCTATCTATCTATCTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGAAGAAAGGGTATGGATATCTCTATCTATCTATCTATCTATCT  50

seq1  ATCTATCTATCTATTAGGAATAAATAGTATTAGAAGTAGAGTACATGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATTAGGAATAAATAGTATTAGAAGTAGAGTACATGAGG  100

seq1  CTATGGAATGGCTAGGATAAGGAAATGAAGATTAAAGAATTAAAAGATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAATGGCTAGGATAAGGAAATGAAGATTAAAGAATTAAAAGATGA  150

seq1  TATAGAAGCATATAAAATTTAGTGCTCTGTATTTCTATCTGATTAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAGCATATAAAATTTAGTGCTCTGTATTTCTATCTGATTAAAGAA  200

seq1  CTGAAGATAACATTGCCTGGAAAGATATTAGAAAGAGGTAACTGTTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGATAACATTGCCTGGAAAGATATTAGAAAGAGGTAACTGTTTTAC  250

seq1  AGTTTTACTTATATACATTCAAAATGTTGTAATAAATCATTTTAGTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACTTATATACATTCAAAATGTTGTAATAAATCATTTTAGTTGTA  300

seq1  GTAGTTTGTCATTTTTCTATTCTTACATGGAAACAGTTACTAAAGACTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTGTCATTTTTCTATTCTTACATGGAAACAGTTACTAAAGACTGC  350

seq1  TTTCTGCTGTATCAGAAAACTGGAATAACTGTTTACAGGCTGTGGAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTGTATCAGAAAACTGGAATAACTGTTTACAGGCTGTGGAAAAC  400

seq1  TATAAGGGATTGTGTTTTTGCTTTGTGCTTAGTTCTGCTCTAAGGAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGGATTGTGTTTTTGCTTTGTGCTTAGTTCTGCTCTAAGGAAGTG  450

seq1  GGTGCTGGGACTGTTGATCTGGGACTCATAGAGTTTATGTAAATTTAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGGACTGTTGATCTGGGACTCATAGAGTTTATGTAAATTTAAGA  500

seq1  ATTTTTGATAATTATTAACAATGATCAAAGCCTTGATGATGTAGCTTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGATAATTATTAACAATGATCAAAGCCTTGATGATGTAGCTTTAG  550

seq1  GCTGTGTTTAGGCTTTCTCTGAAGGAATTAGAATATTAGGAATTAAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTTTAGGCTTTCTCTGAAGGAATTAGAATATTAGGAATTAAGATT  600

seq1  CAAGATATCATGGAATTC  618
      ||||||||||||||||||
seq2  CAAGATATCATGGAATTC  618