BAC Information

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BAC

Clone NameB6Ng01-180M14
Chromosome6 (Build37)
Map Location 134,901,545 - 134,902,705
singlet/doubletsinglet
Overlap gene1190002F15Rik
Upstream geneEtv6, LOC100043660, Bcl2l14, Lrp6, Mansc1, Loh12cr1, LOC100043884, Dusp16, Crebl2, Gpr19, Cdkn1b
Downstream geneApold1, Ddx47, Gprc5a, Gprc5d, LOC100043668, Hebp1, 8430419L09Rik, Gsg1, Pbp2, LOC100043890, Emp1, Grin2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180M14.bB6Ng01-180M14.g
ACCGA007126GA007127
length6251,154
definitionB6Ng01-180M14.b B6Ng01-180M14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactttccaccatgacaacacagactgcctcttttgttcggcctc
tcccactgtgaagagccataaagaaggactttgcctatagagccactgtc
tagtctatctaccataaaaggcctctcctctctgcactcccagccacaac
caccaccaagccaacagccatcaatcaagccgaggaccatcactgtgaga
caagctggagctccccctcatcgtccccagtctacccacccccagcccca
ggctagatgctgtccccagcccattctctgatcctccttgtgactgtcac
tcactttaagcctcaaggttctgttgtcaagcagctgttaataatcaaaa
ttagttgatgtttaggaaggattctgaacccaatgacgctaaaccttgac
agagatcagtgacctctggcctaaaagaaagttgcagccctgaacaaaag
gacacaaggcctcggcccctagcttcactgcggctgtgcaggagtgggtc
atgcctggaacctcccaagaccagtgctcaataagggcagtcaattggca
gtgtgtgttttaaatatcaagcaaccatccagttagtcgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtg
gaattcttttacagaaaagaaaaaaataaacttttatctggcttaagcca
ctactgtttctgggctctgttactagctgccaaatgcaaatcttaactga
tagaaaagtccttgacggagtttgagctggtgaatggatgctgcctgttc
agtggctctgcagtggtggatctgtgggagtggagcatcctggagggtac
caggagataaagatggcttggcagatgggggcagacagtgagaatacacc
tcacaaggtgtcacggactttcttttcccccaggacacctctgctgaagt
actgttatacagtggctctttaaacgtctattgatggagtaatttgaagt
ccgctcctgtcagctggcctcaaagctgggctatttagaagatgcgtact
ctttgtgcctaaaaaaaagagcagcaggtaaagaatggagcgggaagggg
tatcagcattacaggaaagtcaagtgactccctgcaggcgtctccaagga
aaggactttgttacacgtgattgtctaatgaaaatacatcaaagtctaat
gaagatatcctttactgagtagcaactgtaaataatgtcccagatgtaca
tccttctgtagcttatagcatgaattcatatactacctatttctaattta
ttattttcataataacttcatcatcgtaagattaggcaagactgttccat
tttacgttagaaggacatttactgtttatatggattataaaaatatgaac
agactccggttctagctcattctgtaatccaagtacttgtgagccagagg
cagaaagacagttgtgagtttaaggtcaggtgactgtgggtgacatagtc
cagggaccagggggctgcaggtttagacttttcctctcaaaaaaaaacaa
aaaacaaaaaaaccaaaaaccataaaaaagttcagttacacagcacacta
ctaaagcaacataaaagagagtagcttggccccatgtaacgaagggattt
taccatcttttttctattggtgtagaacttgttaagttcagagccaggaa
gaacagctcatcaggcaaactgctgcacaaactgacaggctgggggtgtg
attcctgaactgacctgagaaggtcctctgctctcacttgtacgttggga
ccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_134901545_134902705
seq2: B6Ng01-180M14.g_69_1222

seq1  GAATTCTTTTACAGAAAAGAAAAAAATAAACTTTTATCTGGCTTAAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTACAGAAAAGAAAAAAATAAACTTTTATCTGGCTTAAGCCA  50

seq1  CTACTGTTTCTGGGCTCTGTTACTAGCTGCCAAATGCAAATCTTAACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTTTCTGGGCTCTGTTACTAGCTGCCAAATGCAAATCTTAACTGA  100

seq1  TAGAAAAGTCCTTGACGGAGTTTGAGCTGGTGAATGGATGCTGCCTGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGTCCTTGACGGAGTTTGAGCTGGTGAATGGATGCTGCCTGTTC  150

seq1  AGTGGCTCTGCAGTGGTGGATCTGTGGGAGTGGAGCATCCTGGAGGGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTCTGCAGTGGTGGATCTGTGGGAGTGGAGCATCCTGGAGGGTAC  200

seq1  CAGGAGATAAAGATGGCTTGGCAGATGGGGGCAGACAGTGAGAATACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGATAAAGATGGCTTGGCAGATGGGGGCAGACAGTGAGAATACACC  250

seq1  TCACAAGGTGTCACGGACTTTCTTTTCCCCCAGGACACCTCTGCTGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGGTGTCACGGACTTTCTTTTCCCCCAGGACACCTCTGCTGAAGT  300

seq1  ACTGTTATACAGTGGCTCTTTAAACGTCTATTGATGGAGTAATTTGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTATACAGTGGCTCTTTAAACGTCTATTGATGGAGTAATTTGAAGT  350

seq1  CCGCTCCTGTCAGCTGGCCTCAAAGCTGGGCTATTTAGAAGATGCGTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCCTGTCAGCTGGCCTCAAAGCTGGGCTATTTAGAAGATGCGTACT  400

seq1  CTTTGTGCCTAAAAAAAAGAGCAGCAGGTAAAGAATGGAGCGGGAAGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGCCTAAAAAAAAGAGCAGCAGGTAAAGAATGGAGCGGGAAGGGG  450

seq1  TATCAGCATTACAGGAAAGTCAAGTGACTCCCTGCAGGCGTCTCCAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCATTACAGGAAAGTCAAGTGACTCCCTGCAGGCGTCTCCAAGGA  500

seq1  AAGGACTTTGTTACACGTGATTGTCTAATGAAAATACATCAAAGTCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTTTGTTACACGTGATTGTCTAATGAAAATACATCAAAGTCTAAT  550

seq1  GAAGATATCCTTTACTGAGTAGCAACTGTAAATAATGTCCCAGATGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATCCTTTACTGAGTAGCAACTGTAAATAATGTCCCAGATGTACA  600

seq1  TCCTTCTGTAGCTTATAGCATGAATTCATATACTACCTATTTCTAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGTAGCTTATAGCATGAATTCATATACTACCTATTTCTAATTTA  650

seq1  TTATTTTCATAATAACTTCATCATCGTAAGATTAGGCAAGACTGTTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCATAATAACTTCATCATCGTAAGATTAGGCAAGACTGTTCCAT  700

seq1  TTTACGTTAGAAGGACATTTACTGTTTATATGGATTATAAAAATATGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACGTTAGAAGGACATTTACTGTTTATATGGATTATAAAAATATGAAC  750

seq1  AGACTCCGGTTCTAGCTCATTCTGTAATCCAAGTACTTGTGAGCCAGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCGGTTCTAGCTCATTCTGTAATCCAAGTACTTGTGAGCCAGAGG  800

seq1  CAGAAAGACAGTTGTGAGTTTAAGGTCAGGTGACTGTGGGTGACATAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGACAGTTGTGAGTTTAAGGTCAGGTGACTGTGGGTGACATAGTC  850

seq1  CAGGGACCAGGGGGCTGCAGGGTTAGAC-TTTCCTCTCAAAAAAAAAACA  899
      ||||||||||||||||||||| |||||| ||||||||| |||||||||||
seq2  CAGGGACCAGGGGGCTGCAGGTTTAGACTTTTCCTCTC-AAAAAAAAACA  899

seq1  AAAAACAAAAAAAACCAAAAACCATAAAAAAGTTCAGTTACACAGCACAA  949
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAAAC-AAAAAAACCAAAAACCATAAAAAAGTTCAGTTACACAGCAC-A  947

seq1  CTACTAAAGCAACATAAAAGAGAGTAGCTTGGCCCCATGTAACGAA-GGA  998
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTACTAAAGCAACATAAAAGAGAGTAGCTTGGCCCCATGTAACGAAGGGA  997

seq1  TTTTACCATC-TTTTTCTATT-GTGTAAGAAACTG-TAAGTCCAGAGCCA  1045
      |||||||||| |||||||||| |||| ||||  || ||||| ||||||||
seq2  TTTTACCATCTTTTTTCTATTGGTGT-AGAACTTGTTAAGTTCAGAGCCA  1046

seq1  GGGAG-ACAGCTCATCAGGCAAAACTGCTTGCCACAAACCTGACAGCCT-  1093
      || || |||||||||||||| ||||||||   |||||| ||||||| || 
seq2  GGAAGAACAGCTCATCAGGC-AAACTGCT--GCACAAA-CTGACAGGCTG  1092

seq1  -GGGTGTGATCCCTGGAACTGACCCCTGAGAAGGGTCCTCTGCCTTCCTC  1142
       ||||||||| ||| |||||||  |||||||| ||||||||||    |||
seq2  GGGGTGTGATTCCT-GAACTGA--CCTGAGAA-GGTCCTCTGC---TCTC  1135

seq1  ACTTGTACCTTGGCACCCA  1161
      |||||||| |||| |||||
seq2  ACTTGTACGTTGGGACCCA  1154