BAC Information

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BAC

Clone NameB6Ng01-182G19
Chromosome6 (Build37)
Map Location 83,507,042 - 83,508,174
singlet/doubletsinglet
Overlap geneStambp
Upstream geneTacr1, Pole4, LOC100043412, Hk2, EG622318, Sema4f, D6Mm5e, Dok1, Loxl3, Htra2, Aup1, Dqx1, Tlx2, Pcgf1, Lbx2, A230058J24Rik, Mrpl53, Gcs1, Wbp1, Znhit4, Rtkn, Wdr54, 1700003E16Rik, Dctn1, C330016K18Rik, Mthfd2, Mobk1b, Bola3, D230004J03Rik, Dguok, Actg2
Downstream geneLOC664956, Clec4f, Cd207, Vax2os2, Vax2os1, Vax2, Atp6v1b1, 1700124L16Rik, Ankrd53, Tex261, LOC665004, Nagk, Paip2b, LOC384450, LOC622683, LOC380687, LOC665098, LOC676366, Zfml, Dysf, LOC665114, 4930504D19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182G19.bB6Ng01-182G19.g
ACCGA008316GA008317
length1,132339
definitionB6Ng01-182G19.b B6Ng01-182G19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgcagctgacctcaaatctgtggaaagtcttctgtctcag
attctcagggggtgggattacaggcatgaggtatcattcctgacctgtat
gtattacagttgtatactcatgcatgtgtaggtcagagaaaaactgtgtg
tgttgttcttcacattcaattaatgtgtttttgtgatgagacctcttatt
ggcccaagacttgtcaggtaggctgcctgtctggctttgtaaacttcagg
gatctgccttccattgcccctgggatcatgccatgcactctctgtggagg
gattggtatagagtcagactccagatacccagtcatgggaaaggccacag
aggaagcagccccagttcagggaagttacacccgcttaccagttttccac
agaggactccacaggtttcaatgcctttggcggtattggcactggcaagc
tggagaaattctgagcacagattacggggcaccacgatgtggcgcaggcc
ttcaatggtgggaactgaaatgggcaagagggaagagttggagtccgcag
ggccagggatccctgagcagcagctggagctgacagactgagactgtctc
cagcgacggctgcagctggaggactgagcctggcagagctgagtcccagg
gttccgggctccgtagggatcagccatccctctcctgcctatttctccct
ttggaatagtgttatcttactctgcctctctgccagaagtgtggattact
gagtgcacacactcacagctggagaaggatgaatgcctcgtctagagcag
atctagatagagctctgcatttgtgttttaagatcctgatccttcaagaa
gagaagattttaaccattcaaggtaagatagggctcacctactatcttcc
aaaagtgtttttgaagagtgaaacatgatagcagagagctgctatctcgg
ctctcggaatcttgtgttcagctattccgtaggactcaggaaagaaacac
ctcaaagccagggactgaaggagatgatggctcttgggtacagaagaact
gctgcacagcatgaaggatctgtgctcagactcagaaagccatttaaaat
acaggcgaacaaggctttatctacaaggtggg
actctcaagtttactgggggtttttaaatagttaagatgaagtctttcaa
aaggaataggcaagattcaatatgttagagacacctgtccagccagttct
attgcaggactaattagcctagctgtccatcaacagctgaatggacagag
aaaatgtactgcatattacacaatggagtttgtgcagccataaggagaat
caacatataaagtttgcaataaaatggatgtaaacagaaatcattatatt
aattgaaataagacaaattcggaaaacaaattcaaatacagaatacaaat
tcagaatacaatatatatatgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_83507042_83508174
seq2: B6Ng01-182G19.b_41_1172

seq1  GAATTCACTATGCAGCTGACCTCAAATCTGTGGAAAGTCTTCTGTCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGCAGCTGACCTCAAATCTGTGGAAAGTCTTCTGTCTCAG  50

seq1  ATTCTCAGGGGGTGGGATTACAGGCATGAGGTATCATTCCTGACCTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAGGGGGTGGGATTACAGGCATGAGGTATCATTCCTGACCTGTAT  100

seq1  GTATTACAGTTGTATACTCATGCATGTGTAGGTCAGAGAAAAACTGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACAGTTGTATACTCATGCATGTGTAGGTCAGAGAAAAACTGTGTG  150

seq1  TGTTGTTCTTCACATTCAATTAATGTGTTTTTGTGATGAGACCTCTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTCTTCACATTCAATTAATGTGTTTTTGTGATGAGACCTCTTATT  200

seq1  GGCCCAAGACTTGTCAGGTAGGCTGCCTGTCTGGCTTTGTAAACTTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAAGACTTGTCAGGTAGGCTGCCTGTCTGGCTTTGTAAACTTCAGG  250

seq1  GATCTGCCTTCCATTGCCCCTGGGATCATGCCATGCACTCTCTGTGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCTTCCATTGCCCCTGGGATCATGCCATGCACTCTCTGTGGAGG  300

seq1  GATTGGTATAGAGTCAGACTCCAGATACCCAGTCATGGGAAAGGCCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTATAGAGTCAGACTCCAGATACCCAGTCATGGGAAAGGCCACAG  350

seq1  AGGAAGCAGCCCCAGTTCAGGGAAGTTACACCCGCTTACCAGTTTTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAGCCCCAGTTCAGGGAAGTTACACCCGCTTACCAGTTTTCCAC  400

seq1  AGAGGACTCCACAGGTTTCAATGCCTTTGGCGGTATTGGCACTGGCAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACTCCACAGGTTTCAATGCCTTTGGCGGTATTGGCACTGGCAAGC  450

seq1  TGGAGAAATTCTGAGCACAGATTACGGGGCACCACGATGTGGCGCAGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAATTCTGAGCACAGATTACGGGGCACCACGATGTGGCGCAGGCC  500

seq1  TTCAATGGTGGGAACTGAAATGGGCAAGAGGGAAGAGTTGGAGTCCGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGGTGGGAACTGAAATGGGCAAGAGGGAAGAGTTGGAGTCCGCAG  550

seq1  GGCCAGGGATCCCTGAGCAGCAGCTGGAGCTGACAGACTGAGACTGTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGGATCCCTGAGCAGCAGCTGGAGCTGACAGACTGAGACTGTCTC  600

seq1  CAGCGACGGCTGCAGCTGGAGGACTGAGCCTGGCAGAGCTGAGTCCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGACGGCTGCAGCTGGAGGACTGAGCCTGGCAGAGCTGAGTCCCAGG  650

seq1  GTTCCGGGCTCCGTAGGGATCAGCCATCCCTCTCCTGCCTATTTCTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCGGGCTCCGTAGGGATCAGCCATCCCTCTCCTGCCTATTTCTCCCT  700

seq1  TTGGAATAGTGTTATCTTACTCTGCCTCTCTGCCAGAAGTGTGGATTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATAGTGTTATCTTACTCTGCCTCTCTGCCAGAAGTGTGGATTACT  750

seq1  GAGTGCACACACTCACAGCTGGAGAAGGATGAATGCCTCGTCTAGAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCACACACTCACAGCTGGAGAAGGATGAATGCCTCGTCTAGAGCAG  800

seq1  ATCTAGATAGAGCTCTGCATTTGTGTTTTAAGATCCTGATCCTTCAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGATAGAGCTCTGCATTTGTGTTTTAAGATCCTGATCCTTCAAGAA  850

seq1  GAGAAGATTTTAACCATTCAAGGTAAGATAGGGCTCACCTACTATCTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGATTTTAACCATTCAAGGTAAGATAGGGCTCACCTACTATCTTCC  900

seq1  AAAAGTGTTTTTGAAGAGTGAAACATGATAGCAGAGAGCTGCTATCTCGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGTTTTTGAAGAGTGAAACATGATAGCAGAGAGCTGCTATCTCGG  950

seq1  CTCTCGGAATCTTGTTGTTCAGGCTATTCCGTAAGACTCAGGAAAGAAAC  1000
      |||||||||||||| |||||| ||||||||||| ||||||||||||||||
seq2  CTCTCGGAATCTTG-TGTTCA-GCTATTCCGTAGGACTCAGGAAAGAAAC  998

seq1  AACCTCAAAAGCCAGGGACTG-AGGAGATGATGGCTCCTTGGGTACAGA-  1048
       ||||| |||||||||||||| |||||||||||||| |||||||||||| 
seq2  -ACCTC-AAAGCCAGGGACTGAAGGAGATGATGGCT-CTTGGGTACAGAA  1045

seq1  -GACTGCTGCACAAGCATG-AGGATCTGTGCTCAAGACCCAG-AAGCCA-  1094
        |||||||||| |||||| ||||||||||||| |||| ||| |||||| 
seq2  GAACTGCTGCAC-AGCATGAAGGATCTGTGCTC-AGACTCAGAAAGCCAT  1093

seq1  TTAAAATACAGGCAGAGCAAGGC-TTATCTACAAGGTGGG  1133
      ||||||||||||| || |||||| ||||||||||||||||
seq2  TTAAAATACAGGC-GAACAAGGCTTTATCTACAAGGTGGG  1132