BAC Information

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BAC

Clone NameB6Ng01-183J03
Chromosome6 (Build37)
Map Location 109,531,512 - 109,609,186
singlet/doubletdoublet
Overlap genenone
Upstream geneBhlhb2, Arl8b, Edem1, EG627371, LOC639110, LOC100043720
Downstream geneGrm7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183J03.bB6Ng01-183J03.g
ACCGA009160GA009161
length3111,090
definitionB6Ng01-183J03.b B6Ng01-183J03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,531,512 - 109,531,822)(109,608,088 - 109,609,186)
sequence
agcaactgggtgatggggttggataagtgcaagaatactccaggtatgaa
gctagcagagtgggttgagaaaggcagaataaaactggtcacacagccat
atgggctcctatgaagcaatcaaagaactactaagaaggctggctgatag
tcaatggaaaatggtaccattgattttacaatggtaaggaagtatagcca
ctatttggggtaaaatggatatcaaagcctgatgctagaaaatcttccac
ataagaattttgcaaacaccactgggagtagagtttgatgggatgggtta
tgtgtgtggga

gaattcactcatctaagagccagagcactggaggggttacaggactcaag
ccttttatgccttgatcaagaccccacagacacatactttctttctcccc
aactgggctggagttcattgaattgttagttgcaaggggtccaggagaca
cgattgcatctctaatatacttgaggtacaataataaaaattcagcggtt
tgatttgaggaaggattcacccagcaggcaacaagaaataatggtgggaa
tattgaaaagatactgaaagcatgctgcaggaaaaaaaaaaaaagatcga
atatattattatttcagccttgccatatttttatatgacaactcttagaa
aagaatcctaatatacaagagtgaaagtctctcaacaacttcaaatgctt
tattttttctggaatgcctgtatgatggaaattacttttgattacatggc
tttgtcaggatcgactttctgattttgagttaaaatttatactacaccca
aaggctggtgaaacaagggataagcatacaaaaaaattataaaggtgttt
agaaataatctgctaaactaacagtttagataaatgcagacaacacattt
gaggaactccattcttagtatggaaccagaaagcaattagaaggaacact
atgtcacaggtgtaagaaatgtaaatcaagaaaatatctaataaaaaatt
atttaattaaaaaagaaaataaagaaaaaaactattgctattttatgaga
gaatcaactcccctccattatgtgccctgatctgggataatgtaaataca
gtatgatttttttttatccaacaaagttgtgtaggatgttgttctttaac
tatctaagacccaatgaatcagatgctaatgggttaaaagacaagaatat
ataagttccacaatactttgaccccaattaccaaactacaatattgaaaa
actggacataacttagcctacaaagtccttcatctttgaagttgattttc
agttctgtattggacagcatctctgggtacagacagctgtttatcaattt
caaaagaggtgctgaaatgattgctaaaatactccctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109531512_109531822
seq2: B6Ng01-183J03.b_51_361

seq1  AGCAACTGGGTGATGGGGTTGGATAAGTGCAAGAATACTCCAGGTATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTGGGTGATGGGGTTGGATAAGTGCAAGAATACTCCAGGTATGAA  50

seq1  GCTAGCAGAGTGGGTTGAGAAAGGCAGAATAAAACTGGTCACACAGCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCAGAGTGGGTTGAGAAAGGCAGAATAAAACTGGTCACACAGCCAT  100

seq1  ATGGGCTCCTATGAAGCAATCAAAGAACTACTAAGAAGGCTGGCTGATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTCCTATGAAGCAATCAAAGAACTACTAAGAAGGCTGGCTGATAG  150

seq1  TCAATGGAAAATGGTACCATTGATTTTACAATGGTAAGGAAGTATAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGAAAATGGTACCATTGATTTTACAATGGTAAGGAAGTATAGCCA  200

seq1  CTATTTGGGGTAAAATGGATATCAAAGCCTGATGCTAGAAAATCTTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGGGGTAAAATGGATATCAAAGCCTGATGCTAGAAAATCTTCCAC  250

seq1  ATAAGAATTTTGCAAACACCACTGGGAGTAGAGTTTGATGGGATGGGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAATTTTGCAAACACCACTGGGAGTAGAGTTTGATGGGATGGGTTA  300

seq1  TGTGTGTGGGA  311
      |||||||||||
seq2  TGTGTGTGGGA  311


seq1: chr6_109608088_109609186
seq2: B6Ng01-183J03.g_66_1155 (reverse)

seq1  AGGAGGGGAGTATTTTTTGCCATCTATTTCAGCACCTCTTTTTTGAAAAT  50
      |||| ||||||| |||| || ||| |||||||||||||  |||||||| |
seq2  AGGA-GGGAGTA-TTTTAGCAATC-ATTTCAGCACCTC--TTTTGAAATT  45

seq1  GGATAACAGCTGTCTGTTACCCAGAGAATGCTGTTCCAATACAGAACTTG  100
      |   |||||||||||| ||||||||| |||||| ||||||||||||| ||
seq2  GATAAACAGCTGTCTG-TACCCAGAG-ATGCTG-TCCAATACAGAAC-TG  91

seq1  AAAATCAACTTCAAAGATGAAGGACTTTGTAGGCTAAGTTATGTCCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAACTTCAAAGATGAAGGACTTTGTAGGCTAAGTTATGTCCAGTT  141

seq1  TTTCAATATTTGTAGTTTGGTAATTGGGGTCAAAGTATTGTGGAACTTAT  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATA-TTGTAGTTTGGTAATTGGGGTCAAAGTATTGTGGAACTTAT  190

seq1  ATATTCTTGTCTTTTAA-CCATTAGCATCTGATTCATTGGGTCTTAGATA  249
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATATTCTTGTCTTTTAACCCATTAGCATCTGATTCATTGGGTCTTAGATA  240

seq1  GTTAAAG-ACAACATCCTACACAACTTTGTTGGATTAAAAAAAAATCATA  298
      ||||||| |||||||||||||||||||||||||| |||||||||||||||
seq2  GTTAAAGAACAACATCCTACACAACTTTGTTGGA-TAAAAAAAAATCATA  289

seq1  CTGTATTTACATTATCCCAGATCAGGGCACATAATGGAGGGGAGTTGATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTACATTATCCCAGATCAGGGCACATAATGGAGGGGAGTTGATT  339

seq1  CTCTCATAAAATAGCAATAGTTTTTTTCTTTATTTTCTTTTTTAATTAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATAAAATAGCAATAGTTTTTTTCTTTATTTTCTTTTTTAATTAAA  389

seq1  TAATTTTTTATTAGATATTTTCTTGATTTACATTTCTTACACCTGTGACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTATTAGATATTTTCTTGATTTACATTTCTTACACCTGTGACA  439

seq1  TAGTGTTCCTTCTAATTGCTTTCTGGTTCCATACTAAGAATGGAGTTCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTCCTTCTAATTGCTTTCTGGTTCCATACTAAGAATGGAGTTCCT  489

seq1  CAAATGTGTTGTCTGCATTTATCTAAACTGTTAGTTTAGCAGATTATTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGTTGTCTGCATTTATCTAAACTGTTAGTTTAGCAGATTATTTC  539

seq1  TAAACACCTTTATAATTTTTTTGTATGCTTATCCCTTGTTTCACCAGCCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACCTTTATAATTTTTTTGTATGCTTATCCCTTGTTTCACCAGCCT  589

seq1  TTGGGTGTAGTATAAATTTTAACTCAAAATCAGAAAGTCGATCCTGACAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGTAGTATAAATTTTAACTCAAAATCAGAAAGTCGATCCTGACAA  639

seq1  AGCCATGTAATCAAAAGTAATTTCCATCATACAGGCATTCCAGAAAAAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGTAATCAAAAGTAATTTCCATCATACAGGCATTCCAGAAAAAAT  689

seq1  AAAGCATTTGAAGTTGTTGAGAGACTTTCACTCTTGTATATTAGGATTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTTGAAGTTGTTGAGAGACTTTCACTCTTGTATATTAGGATTCT  739

seq1  TTTCTAAGAGTTGTCATATAAAAATATGGCAAGGCTGAAATAATAATATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAGAGTTGTCATATAAAAATATGGCAAGGCTGAAATAATAATATA  789

seq1  TTCGATCTTTTTTTTTTTTTCCTGCAGCATGCTTTCAGTATCTTTTCAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATCTTTTTTTTTTTTTCCTGCAGCATGCTTTCAGTATCTTTTCAAT  839

seq1  ATTCCCACCATTATTTCTTGTTGCCTGCTGGGTGAATCCTTCCTCAAATC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCACCATTATTTCTTGTTGCCTGCTGGGTGAATCCTTCCTCAAATC  889

seq1  AAACCGCTGAATTTTTATTATTGTACCTCAAGTATATTAGAGATGCAATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCGCTGAATTTTTATTATTGTACCTCAAGTATATTAGAGATGCAATC  939

seq1  GTGTCTCCTGGACCCCTTGCAACTAACAATTCAATGAACTCCAGCCCAGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCCTGGACCCCTTGCAACTAACAATTCAATGAACTCCAGCCCAGT  989

seq1  TGGGGAGAAAGAAAGTATGTGTCTGTGGGGTCTTGATCAAGGCATAAAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGAAAGAAAGTATGTGTCTGTGGGGTCTTGATCAAGGCATAAAAG  1039

seq1  GCTTGAGTCCTGTAACCCCTCCAGTGCTCTGGCTCTTAGATGAGTGAATT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGTCCTGTAACCCCTCCAGTGCTCTGGCTCTTAGATGAGTGAATT  1089

seq1  C  1099
      |
seq2  C  1090


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