BAC Information

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BAC

Clone NameB6Ng01-184E05
Chromosome6 (Build37)
Map Location 49,105,511 - 49,106,027
singlet/doubletsinglet
Overlap geneIgf2bp3
Upstream geneLOC665990, Krba1, Zfp467, Sspo, EG666005, Atp6v0e2, Lrrc61, Rarres2, EG330305, Repin1, Zfp775, AI854703, Gimap8, LOC100040560, Gimap9, Gimap4, Gimap6, Gimap7, LOC100041450, Gimap1, Gimap5, Gimap3, Tmem176b, Tmem176a, EG666105, Abp1, 1600015I10Rik, LOC100040589, Doxl2, Svs1, Gpnmb, LOC666011
Downstream geneLOC100040626, Tra2a, Ccdc126, D330028D13Rik, Stk31, LOC384383, LOC666210, Npy, LOC100041653, LOC624524, Mpp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184E05.bB6Ng01-184E05.g
ACCGA009683GA009684
length511849
definitionB6Ng01-184E05.b B6Ng01-184E05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tactatgttagaatatttgattttaaaaactaccgtttgagggctgggca
tttacctcagtggtaaaggtgcttagcatgtttaatcagcatctatctac
ccaccccccaatatgcaatttggatcagtaacttgaatttatttatttat
ttatttatttatttattagatctttaagtgaatttttacttgatattagg
ccagaatttccaactatttttcaaatgaccttaggccactttttgtatac
acgtttgtgtgtgcacacatgtctgcagatgtacatttgtgtgtgtgtgt
gtgtgtgtgtgtgtgtaagtcagaggcagctgttgcatgacttccccatt
atttcccacgtaggctttctacatgatgaattaactacttttctattgct
gtgataattcatcaaaactaagaaactcacagaataatgtgtttatttgc
gctttccgttctccaaggggttagcgcccataacggctgagggccaaggg
cccacatcttt
gaattcttaggatatatggccagaaatggtatagctggggcatatagtag
ttctagtttcagctttttgagaaacttccacactaccatttgtcatattg
caccaggctacactctcaccaacagtggagaaaggttcctctctccccat
gtccttgccagtccttatgtttggttttcttgatgagtagccatgctgga
tgggtggagtgaaatctctaaactggctaagagggtggggcatgctgcac
agtggttattagccatctggatttcctgagaactctctccagccctttat
ggatgtttactttattgagttctttgtatattctagatactaatcctctg
gtgaatgtaaagtttgctaagatttttctcctaatctatatgcattctct
taagttgattgacgatttcctctgttcctgcttttaattgtattgataat
tggcctccctgggcaaccagtcctgtattgtgaatgtactccctgatttc
tcatctatgcattccagactttgagatacgactttgaggctcttcaagga
tccacttggagctgttttatgtagggtgaaaacaaggacccagttccatc
cttttgtgtatggacatccagcttcctaaacacatttgttgagaggtggt
cttttctctgatgtgtatattttatattggaagatcttgacggatgtaaa
gtccacagaagccctgaatagcagatgatgtcagtgttagcagactagct
tcacctgatttaaaaaattaaagtggcacatgctctgccactctctgacc
tgttgtttgcaatgtctgaacaggattgccatgctgcacctcataagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_49105511_49106027
seq2: B6Ng01-184E05.b_41_556

seq1  GAATTCTACTATGTTAGAATATTTGATTTTAAAAACTACCGTTTGAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTATGTTAGAATATTTGATTTTAAAAACTACCGTTTGAGGGC  50

seq1  TGGGCATTTACCTCAGTGGTAAAGGTGCTTAGCATGTTTAATCAGCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATTTACCTCAGTGGTAAAGGTGCTTAGCATGTTTAATCAGCATCT  100

seq1  ATCTACCCACCCCCCAATATGCAATTTGGATCAGTAACTTGAATTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACCCACCCCCCAATATGCAATTTGGATCAGTAACTTGAATTTATTT  150

seq1  ATTTATTTATTTATTTATTTATTAGATCTTTAAGTGAATTTTTACTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTATTTATTTATTAGATCTTTAAGTGAATTTTTACTTGAT  200

seq1  ATTAGGCCAGAATTTCCAACTATTTTTCAAATGACCTTAGGCCACTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGCCAGAATTTCCAACTATTTTTCAAATGACCTTAGGCCACTTTTT  250

seq1  GTATACACGTTTGTGTGTGCACACATGTCTGCAGATGTACATTTGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACACGTTTGTGTGTGCACACATGTCTGCAGATGTACATTTGTGTGT  300

seq1  GTGTGTGTGTGTGTGTGTGTGTAAGTCAGAGGCAGCTGTTGCATGACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTAAGTCAGAGGCAGCTGTTGCATGACTTC  350

seq1  CCCATTATTTCCCACGTAGGCTTTCTACATGATGAATTAACTACTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTATTTCCCACGTAGGCTTTCTACATGATGAATTAACTACTTTTCT  400

seq1  ATTGCTGTGATAAGTCATCAAAACTAAGAAACTCACAGAATAATGGGTTT  450
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  ATTGCTGTGATAATTCATCAAAACTAAGAAACTCACAGAATAATGTGTTT  450

seq1  ATTTGCGCTTACCGTTCTCCAAGGGGTTAGCGCCCATAACGGCTGAGGGC  500
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCGCTTTCCGTTCTCCAAGGGGTTAGCGCCCATAACGGCTGAGGGC  500

seq1  CAAGGGCCCAACATCTT  517
      ||||||||| |||||||
seq2  CAAGGGCCC-ACATCTT  516