BAC Information

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BAC

Clone NameB6Ng01-185B04
Chromosome6 (Build37)
Map Location 69,155,294 - 69,155,896
singlet/doubletsinglet
Overlap geneIgk
Upstream geneLOC232047, EG381776, Igkv14-111, Igkv1-110, Igkv2-109, Igkv1-108, Igkv2-107, Igkv11-106, Igkv2-105, LOC384408, Gm1067, Igkv15-103, Igkv15-102, Igkv20-101-2, Igkv15-101-1, Igkv15-101, Igkv14-100, Igkv1-99, Igkv12-98, Igkv15-97, Igkv10-96, Igkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459, Igkv13-85, Igkv13-84, Igkv4-83, Igkv13-82, Gm460, Igkv13-80-1, Igkv4-80, Gm194, EG628498, Igkv4-78, EG667621, Igkv13-76, Igkv4-75, Igkv13-74-1, LOC236047, Igkv13-73-1, EG628516
Downstream geneGm1499, Igkv13-71-1, Igkv4-71, Gm1502, EG628541, Gm1419, Igkv12-67, Igkv12-66, Igkv4-65, Igkv13-64, EG628571, Igkv13-62-1, EG636752, Igkv13-61-1, Igkv4-61, EG667683, Igkv4-60, Gm1077, Igkv13-57-2, Gm1418, Igkv13-57-1, Gm189, Igkv13-56-1, Igkv4-56, Igkv13-55-1, Gm1524, Igkv13-54-1, Igkv4-54, Gm1420, Igkv4-51, Gm1069, Igkv12-49, Igkv5-48, ENSMUSG00000029975, Igkv12-46, Igkv5-45, Igkv12-44, Igkv5-43, Igkv12-42, Igkv12-41, Igkv5-40-1, Igkv12-40, Gm1409, Igkv12-38, Gm1410, Igkv18-36, Igkv1-35, Igkv8-34, U29423, ENSMUSG00000053690, Igkv8-31, Igkv8-30, LOC545852, Igkv6-29, Igkv8-28, Igkv8-27, Igkv8-26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185B04.bB6Ng01-185B04.g
ACCGA010283GA010284
length1,180978
definitionB6Ng01-185B04.b B6Ng01-185B04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacatgtacataataaaagcaatatatggcaaacca
gtacccaacgtcaagcttaatgcagagactcttgaagcaatcccactaaa
accagggactagactacccactttctccccacctattcaatatagtactt
gaagtcctagccagagcaattagaaaacaaaaggaggtgaaagggataca
aattggaaaggaagaagtcaaaatatcactatttgcagatgatataatag
tatatgtaagtgacccaaaaattccaccagagaactcatgaacctgataa
acagcttcagtgaagtagctggatatacaattatctcgaagaaatcagtc
gcctttatctacacaaaggataaacaggcccagaaagaaattagggaaac
aacaccctttaaaatagtcacaaaaaatataaaattctttgatgtgactc
taaataagcaagttgaaagttctgtatgataagaacttcaagtctctgaa
gaaagaaatcaaagaagatctcagagggtagaaagatctcccatgctcat
ggattgacaagattaatatagtaaaaattgtcatcttgccgaaagcaatg
tacagatacaatgcaatccccatcaaaattccaattcaattcttgacaga
gttagaaagggcaatttgcaaattcatctggaataataaaagaaaaaaaa
agcctatgatagcaaaacttttctcaacaataaaagaacctcttgtggaa
tcaccctcttgacttcaatctatattacagagcaattgtggttaaaactg
catggtactggtccactgacagacaggtagatcaatggaatagaattgaa
gacccagaaatgaacccacacacctattgtcacttgatctttgacaaggg
agctaaaaccatccagtggaaaaaaagacagcattttcaacaattggtgc
tgacacaactgggcagttagcatgtagaagaatgtgaattgatccattct
ctatcctgtacaaagctcaaatgttgtggatcatgacacacataaccaga
gacactaaactacagaagagaagtggggaaagcttcgagtatggcacagg
aaaatctgacagacacatgcttggctgtagatcggaatcacaatggactc
atgaatgccaagctctctgtaaaggtaaag
gaattcaggatcatctctcaatccctggaggaagataatttgttaaagtc
accagtatcactacttgctctcatactaaggaactgtggacaatattcat
aaaagagcaactcgacaacaaaaggagatcaaggggacacaaattggaaa
agaggaagtcaaaatatcactttttgcagacgacatgatagtatatataa
gtgaccctaaaattccacgagagaacccctaaacctgataaacagcttcg
gtgaagtagctggatataaaattaactcaaacaagtcaatggcctttgtc
tacacaaagaataaacacactaagaaagaaattagggaaacaacaccctt
ctcaatagtcacaaataatataaaatatcttggcgtgactctaactaaag
tagtaaaagatctgtatgataacaacttcaagtctctgaagaaagaaatt
aaagaagatctcagaagatggaaagatctcccatgctcatggattggcag
gatcaacaatggaaaaatggctatcttgccaaaaacaatgtacagattca
atgcaatccccatcaaaattccaactcaattcttcaacgaattagaaaga
gcaatctgcaaattcatctggaataacaaaaaacctaggatagcaaaaac
tcttctcaaggataaaagaacctctggtggaatcaccatgcctgacctaa
agctttactacagagcaattgtgataaaaactgcatggtactggtatact
gacagacaagtagaccaatggaatagaattgaagacccagaaatgaaccc
acacacctatggtcacttgatctttgacaagggagctaaaactatccagt
ggaagaaagacagcattttcaacaaatggtgctggcacaactgggttgtt
atcatgtagaagaatgcgaatagattcatacctatctccttgtactaagg
tcaaatctaaatggatcaaagaacttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_69155294_69155896
seq2: B6Ng01-185B04.g_65_667

seq1  GAATTCAGGATCATCTCTCAATCCCTGGAGGAAGATAATTTGTTAAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGATCATCTCTCAATCCCTGGAGGAAGATAATTTGTTAAAGTC  50

seq1  ACCAGTATCACTACTTGCTCTCATACTAAGGAACTGTGGACAATATTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTATCACTACTTGCTCTCATACTAAGGAACTGTGGACAATATTCAT  100

seq1  AAAAGAGCAACTCGACAACAAAAGGAGATCAAGGGGACACAAATTGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGCAACTCGACAACAAAAGGAGATCAAGGGGACACAAATTGGAAA  150

seq1  AGAGGAAGTCAAAATATCACTTTTTGCAGACGACATGATAGTATATATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGTCAAAATATCACTTTTTGCAGACGACATGATAGTATATATAA  200

seq1  GTGACCCTAAAATTCCACGAGAGAACCCCTAAACCTGATAAACAGCTTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCTAAAATTCCACGAGAGAACCCCTAAACCTGATAAACAGCTTCG  250

seq1  GTGAAGTAGCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTAGCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTGTC  300

seq1  TACACAAAGAATAAACACACTAAGAAAGAAATTAGGGAAACAACACCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAGAATAAACACACTAAGAAAGAAATTAGGGAAACAACACCCTT  350

seq1  CTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACTCTAACTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACTCTAACTAAAG  400

seq1  TAGTAAAAGATCTGTATGATAACAACTTCAAGTCTCTGAAGAAAGAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAAGATCTGTATGATAACAACTTCAAGTCTCTGAAGAAAGAAATT  450

seq1  AAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAG  500

seq1  GATCAACAATGGAAAAATGGCTATCTTGCCAAAAACAATGTACAGATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACAATGGAAAAATGGCTATCTTGCCAAAAACAATGTACAGATTCA  550

seq1  ATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGA  600

seq1  GCA  603
      |||
seq2  GCA  603