BAC Information

Click to search

BAC

Clone NameB6Ng01-185G08
Chromosome6 (Build37)
Map Location 85,507,625 - 85,508,712
singlet/doubletsinglet
Overlap genenone
Upstream geneCyp26b1, Exoc6b, LOC665129, Npm3-ps1, EG545861, EG623016, Spr, LOC665086, LOC665089, Emx1, Sfxn5, Rab11fip5, Noto, Smyd5, 1700040I03Rik, Cct7, Fbxo41, Egr4
Downstream geneAlms1, LOC100043497, EG665134, LOC100043493, Cml3, LOC623273, Cml5, Cml4, LOC100043504, LOC100043508, Cml2, LOC665177, 1700019G17Rik, Cml1, Tprkb, EG434057, LOC665213, Dusp11, Figla, Add2, Tgfa, LOC665233, LOC100043094, LOC100043527, 2010309E21Rik, Snrpg, Pcyox1, Tia1, C87436, 2310040G24Rik, Pcbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185G08.bB6Ng01-185G08.g
ACCGA010521GA010522
length1,0511,100
definitionB6Ng01-185G08.b B6Ng01-185G08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaatataaaagctagattaaaaagacaagaaaattatgacat
tagatctgacaacaatttcctggttatgatccccccaagacatgggtaac
agaaagcaatgctgaactattaaatctgctatatgtcaaaagacacaatc
aacaaagtgattgtgtgagaggcagcctacagagtggcaagatgtatttt
cagattatatatacatttagtaagggactaccatatagaaaagtccaaca
actacaaaacaaaaagtcaagcagctaaatttctaaaggtcaaaggactt
aaaaacaagttatacaaatggttaaaatgcacacaggatgtccggtaggc
atgtaaataaaccacagcgagaaaccaccttatactcaatagtatagcta
gtagataacattcaaaaacaaaacaaaaaccaaaacaaccaacaacaaca
agataaataagcagccacaaaagagcagtgaggcccgcaggggccctcag
gaatcactgctggccaaagcataaaaggacaggcactgcggtctcaccag
ttggtcagtttctcagtaagacacaattaccacatgatttgttatttcca
ttcttgggtgtacctcaaagaactgcatacagggattccaggatcagccc
cattcacaatagctgaagcattgcaagtgcccaagtgtctatcattggat
ttgtgaatagatttttaaaaagtgtgtcatatatatacaacaggaaaaac
tcaagtactgtttgtgctttggcataggtgagccttgaaaaaaaatgtaa
agagggtagaactgcagcttaatggtagaactgcctcaaaaggagttgtc
ctatgttcaatccctggggacaggggagcctgacaagaatcatatattat
acgattgtgttatatgaaataaccagaacagacaagtccccagagacaga
agcaaattattgactcccagaggataggggaagggcagagtatggatgat
tagtataagcccaaatgtactaattgtttattggggggggggggggggaa
g
gaattctgggtagtcagtgcccttcggatgggagcctggcagctaatcct
tctacaggcatactccaagttcagccttagctcacatgggcactaagttg
gtgagggcacgtccagattttgagctacagagatctcacaggaataactg
tgtactatctgaagctactataacttttttattttgttaggtactaatag
ggaagcaatacaccctggaaagccatagcattttgggtgcccccccccaa
taaccaaaaaacaaataaaaaaaccaggagaaacaggttagagacattgc
atgggatgaaaaactcttgttttttgtcatggtaaattttagtcctatta
aatatctgagtaagatgtcaaatgggcaattagaaacgtaaccctggagc
tttagggagagacagaactataatatcactagggagttgtcagaggatga
catttaaagtatgaactgggtgagttctcacagagaataagatgcaagaa
gatggaggactcaggctgggcggagatttcaccaacactgactggaaggg
aaggggagacatagacagagatgtgggagactgaggaagcataacagaag
gaatggcattataatagagaactagacaaaaacagcttaaagaagcatct
attcagctcacaattggagggatccagtccacggtggtgaggaaggcatg
gcagtgggaaagcagggtgaccagtcacatgtatccacggtcagaaagca
tgcagggagatggatggtgatcatcagctcactttctcctttttgtttca
gtccgggactccagctcatgggatggttcagcctaaattcaaggtggatc
tttccattctttagttaaacatctttcgggatttgccctcccagatgtac
cttagaggtgttctctctcctttccttctttctttctgtcactcattatc
ctctctcttcttccctctcttcctctcccctcccctctcttacattctcc
tcgtcttgacttgtctgtcttgcctgacttgcatgtctgtctgttctgaa
tctcaagcctctgggagaagttatgccctacaccttgttgaacggatctt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_85507625_85508712
seq2: B6Ng01-185G08.g_71_1170

seq1  GAATTCTGGGTAGTCAGTGCCCTTCGGATGGGAGCCTGGCAGCTAATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTAGTCAGTGCCCTTCGGATGGGAGCCTGGCAGCTAATCCT  50

seq1  TCTACAGGCATACTCCAAGTTCAGCCTTAGCTCACATGGGCACTAAGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGGCATACTCCAAGTTCAGCCTTAGCTCACATGGGCACTAAGTTG  100

seq1  GTGAGGGCACGTCCAGATTTTGAGCTACAGAGATCTCACAGGAATAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGCACGTCCAGATTTTGAGCTACAGAGATCTCACAGGAATAACTG  150

seq1  TGTACTATCTGAAGCTACTATAACTTTTTTATTTTGTTAGGTACTAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTATCTGAAGCTACTATAACTTTTTTATTTTGTTAGGTACTAATAG  200

seq1  GGAAGCAATACACCCTGGAAAGCCATAGCATTTTGGGTGCCCCCCCCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAATACACCCTGGAAAGCCATAGCATTTTGGGTGCCCCCCCCCAA  250

seq1  TAACCAAAAAACAAATAAAAAAACCAGGAGAAACAGGTTAGAGACATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAAAAACAAATAAAAAAACCAGGAGAAACAGGTTAGAGACATTGC  300

seq1  ATGGGATGAAAAACTCTTGTTTTTTGTCATGGTAAATTTTAGTCCTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATGAAAAACTCTTGTTTTTTGTCATGGTAAATTTTAGTCCTATTA  350

seq1  AATATCTGAGTAAGATGTCAAATGGGCAATTAGAAACGTAACCCTGGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGAGTAAGATGTCAAATGGGCAATTAGAAACGTAACCCTGGAGC  400

seq1  TTTAGGGAGAGACAGAACTATAATATCACTAGGGAGTTGTCAGAGGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGAGAGACAGAACTATAATATCACTAGGGAGTTGTCAGAGGATGA  450

seq1  CATTTAAAGTATGAACTGGGTGAGTTCTCACAGAGAATAAGATGCAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAGTATGAACTGGGTGAGTTCTCACAGAGAATAAGATGCAAGAA  500

seq1  GATGGAGGACTCAGGCTGGGCGGAGATTTCACCAACACTGACTGGAAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGGACTCAGGCTGGGCGGAGATTTCACCAACACTGACTGGAAGGG  550

seq1  AAGGGGAGACATAGACAGAGATGTGGGAGACTGAGGAAGCATAACAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAGACATAGACAGAGATGTGGGAGACTGAGGAAGCATAACAGAAG  600

seq1  GAATGGCATTATAATAGAGAACTAGACAAAAACAGCTTAAAGAAGCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCATTATAATAGAGAACTAGACAAAAACAGCTTAAAGAAGCATCT  650

seq1  ATTCAGCTCACAATTGGAGGGATCCAGTCCACGGTGGTGAGGAAGGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCTCACAATTGGAGGGATCCAGTCCACGGTGGTGAGGAAGGCATG  700

seq1  GCAGTGGGAAAGCAGGGTGACCAGTCACATGTATCCACGGTCAGAAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGGAAAGCAGGGTGACCAGTCACATGTATCCACGGTCAGAAAGCA  750

seq1  TGCAGGGAGATGGATGGTGATCATCAGCTCACTTTCTCCTTTTTGTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGAGATGGATGGTGATCATCAGCTCACTTTCTCCTTTTTGTTTCA  800

seq1  GTCCGGGACTCCAGCTCATGGGATGGTTCAGCCTAAATTCAGGGTGGATC  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTCCGGGACTCCAGCTCATGGGATGGTTCAGCCTAAATTCAAGGTGGATC  850

seq1  -TTCCATTC-TTAGTTAAACATC-TTCGGGA-TTGCCCTCCCAGATGTAC  896
       |||||||| ||||||||||||| ||||||| ||||||||||||||||||
seq2  TTTCCATTCTTTAGTTAAACATCTTTCGGGATTTGCCCTCCCAGATGTAC  900

seq1  C-TAGAGGTGTTCTCTCTCC-TTCCTTCTTCCTTTCTGTCACTCATTATC  944
      | |||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  CTTAGAGGTGTTCTCTCTCCTTTCCTTCTTTCTTTCTGTCACTCATTATC  950

seq1  CTCTCTTCTTTCTTCCCTCTCTTTCCTCTCCCCTCCCCTCTCTTACA-TC  993
      ||||||   |||||||||||| ||||||||||||||||||||||||| ||
seq2  CTCTCT--CTTCTTCCCTCTC-TTCCTCTCCCCTCCCCTCTCTTACATTC  997

seq1  TCCTCGTC-TGAC-TGTCTG-CCTGCCTG-CCTGCCTGTCTGTCTGTCTG  1039
      |||||||| |||| |||||| | |||||| | ||| |||||||||||   
seq2  TCCTCGTCTTGACTTGTCTGTCTTGCCTGACTTGCATGTCTGTCTGTTCT  1047

seq1  GAATCTCAGGCCTCCTGGAGAAG-TATG-CCTACACCT--GTGGACGGAT  1085
      |||||||| |||||  ||||||| |||| |||||||||   || ||||||
seq2  GAATCTCAAGCCTCTGGGAGAAGTTATGCCCTACACCTTGTTGAACGGAT  1097

seq1  CTT  1088
      |||
seq2  CTT  1100